RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 WAPLQ7Z5K2 1190 aa21.79■■□□□ 1.08
CCS-206ENST00000530961 LAMC1P11047 1609 aa21.79■■□□□ 1.08
CCS-206ENST00000530961 ROBO1Q9Y6N7 1651 aa21.79■■□□□ 1.08
CCS-206ENST00000530961 CDK12Q9NYV4 1490 aaPredicted RBP21.78■■□□□ 1.08
CCS-206ENST00000530961 ROCK2O75116 1388 aaKnown RBP21.78■■□□□ 1.08
CCS-206ENST00000530961 CADPS2Q86UW7 1296 aa21.78■■□□□ 1.08
CCS-206ENST00000530961 POGKQ9P215 609 aa21.78■■□□□ 1.08
CCS-206ENST00000530961 ATF3P18847 181 aa21.77■■□□□ 1.08
CCS-206ENST00000530961 PRAM1Q96QH2 718 aa21.77■■□□□ 1.08
CCS-206ENST00000530961 ZRANB1Q9UGI0 708 aa21.77■■□□□ 1.08
CCS-206ENST00000530961 CHD2O14647 1828 aaKnown RBP21.77■■□□□ 1.08
CCS-206ENST00000530961 XRN1Q8IZH2 1706 aaKnown RBP21.77■■□□□ 1.08
CCS-206ENST00000530961 GPRASP1Q5JY77 1395 aa21.74■■□□□ 1.07
CCS-206ENST00000530961 ADGRL3Q9HAR2 1447 aa21.73■■□□□ 1.07
CCS-206ENST00000530961 CARD11Q9BXL7 1154 aa21.73■■□□□ 1.07
CCS-206ENST00000530961 SPATA31A6Q5VVP1 1343 aa21.73■■□□□ 1.07
CCS-206ENST00000530961 PLEKHH1Q9ULM0 1364 aa21.73■■□□□ 1.07
CCS-206ENST00000530961 DLC1Q96QB1 1528 aa21.72■■□□□ 1.07
CCS-206ENST00000530961 XIRP1Q702N8 1843 aaKnown RBP21.72■■□□□ 1.07
CCS-206ENST00000530961 DCCP43146 1447 aa21.72■■□□□ 1.07
CCS-206ENST00000530961 SLAIN2Q9P270 581 aa21.71■■□□□ 1.07
CCS-206ENST00000530961 SAFB2Q14151 953 aaKnown RBP eCLIP21.7■■□□□ 1.06
CCS-206ENST00000530961 RALGAPBQ86X10 1494 aa21.69■■□□□ 1.06
CCS-206ENST00000530961 PHLPP1O60346 1717 aa21.69■■□□□ 1.06
CCS-206ENST00000530961 KIAA1210Q9ULL0 1709 aa21.68■■□□□ 1.06
CCS-206ENST00000530961 LRP6O75581 1613 aa21.67■■□□□ 1.06
CCS-206ENST00000530961 CENPJQ9HC77 1338 aaPredicted RBP21.66■■□□□ 1.06
CCS-206ENST00000530961 EIF3AQ14152 1382 aaKnown RBP21.65■■□□□ 1.06
CCS-206ENST00000530961 MINK1Q8N4C8 1332 aaPredicted RBP21.62■■□□□ 1.05
CCS-206ENST00000530961 KNDC1Q76NI1 1749 aa21.61■■□□□ 1.05
CCS-206ENST00000530961 NUTM2BA6NNL0 878 aaPredicted RBP21.61■■□□□ 1.05
CCS-206ENST00000530961 NUTM2EB1AL46 878 aaPredicted RBP21.61■■□□□ 1.05
CCS-206ENST00000530961 WASLO00401 505 aaPredicted RBP21.61■■□□□ 1.05
CCS-206ENST00000530961 NUTM2AQ8IVF1 878 aaPredicted RBP21.61■■□□□ 1.05
CCS-206ENST00000530961 HIRIP3Q9BW71 556 aaPredicted RBP21.61■■□□□ 1.05
CCS-206ENST00000530961 TRPM1Q7Z4N2 1603 aa21.61■■□□□ 1.05
CCS-206ENST00000530961 MST1RQ04912 1400 aa21.59■■□□□ 1.05
CCS-206ENST00000530961 SLC24A1O60721 1099 aa21.57■■□□□ 1.04
CCS-206ENST00000530961 BRINP3Q76B58 766 aa21.57■■□□□ 1.04
CCS-206ENST00000530961 RGS12O14924 1447 aa21.56■■□□□ 1.04
CCS-206ENST00000530961 COL16A1Q07092 1604 aaPredicted RBP21.56■■□□□ 1.04
CCS-206ENST00000530961 C1orf167Q5SNV9 1468 aa21.56■■□□□ 1.04
CCS-206ENST00000530961 CDK19Q9BWU1 502 aa21.55■■□□□ 1.04
CCS-206ENST00000530961 ATAD2Q6PL18 1390 aa21.55■■□□□ 1.04
CCS-206ENST00000530961 CDC42BPGQ6DT37 1551 aa21.54■■□□□ 1.04
CCS-206ENST00000530961 NUTM2FA1L443 756 aa21.54■■□□□ 1.04
CCS-206ENST00000530961 ESCO1Q5FWF5 840 aa21.54■■□□□ 1.04
CCS-206ENST00000530961 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.54■■□□□ 1.04
CCS-206ENST00000530961 SBNO2Q9Y2G9 1366 aa21.53■■□□□ 1.04
CCS-206ENST00000530961 ST20-MTHFSA0A0A6YYL1 179 aa21.53■■□□□ 1.04
CCS-206ENST00000530961 RBM6P78332 1123 aaKnown RBP21.53■■□□□ 1.04
CCS-206ENST00000530961 ORAI2Q96SN7 254 aa21.53■■□□□ 1.04
CCS-206ENST00000530961 EVC2Q86UK5 1308 aa21.53■■□□□ 1.04
CCS-206ENST00000530961 USP47Q96K76 1375 aa21.52■■□□□ 1.04
CCS-206ENST00000530961 AFF2P51816 1311 aa21.52■■□□□ 1.03
CCS-206ENST00000530961 ANKARQ7Z5J8 1434 aa21.51■■□□□ 1.03
CCS-206ENST00000530961 SRPK2P78362 688 aaKnown RBP21.5■■□□□ 1.03
CCS-206ENST00000530961 NUDT16Q96DE0 195 aaKnown RBP21.5■■□□□ 1.03
CCS-206ENST00000530961 NALCNQ8IZF0 1738 aa21.49■■□□□ 1.03
CCS-206ENST00000530961 EIF4G2P78344 907 aaKnown RBP eCLIP21.49■■□□□ 1.032e-6■■■■■ 26.9
CCS-206ENST00000530961 CCDC61Q9Y6R9 512 aa21.49■■□□□ 1.03
CCS-206ENST00000530961 ADGRB2O60241 1585 aa21.48■■□□□ 1.03
CCS-206ENST00000530961 TESK2Q96S53 571 aa21.48■■□□□ 1.03
CCS-206ENST00000530961 PHF8Q9UPP1 1060 aa21.48■■□□□ 1.03
CCS-206ENST00000530961 SHPRHQ149N8 1683 aa21.47■■□□□ 1.03
CCS-206ENST00000530961 PRR36Q9H6K5 1346 aa21.47■■□□□ 1.03
CCS-206ENST00000530961 ARHGEF28Q8N1W1 1705 aaKnown RBP21.46■■□□□ 1.03
CCS-206ENST00000530961 PUS7Q96PZ0 661 aaKnown RBP21.46■■□□□ 1.03
CCS-206ENST00000530961 QTRT2Q9H974 415 aaKnown RBP21.46■■□□□ 1.03
CCS-206ENST00000530961 CABP2Q9NPB3 220 aa21.46■■□□□ 1.03
CCS-206ENST00000530961 NGLY1Q96IV0 654 aa21.45■■□□□ 1.02
CCS-206ENST00000530961 NPHP3Q7Z494 1330 aa21.45■■□□□ 1.02
CCS-206ENST00000530961 FOXO3O43524 673 aa21.44■■□□□ 1.02
CCS-206ENST00000530961 TULP4Q9NRJ4 1543 aa21.44■■□□□ 1.02
CCS-206ENST00000530961 ZEB1P37275 1124 aaPredicted RBP21.43■■□□□ 1.02
CCS-206ENST00000530961 TMF1P82094 1093 aa21.43■■□□□ 1.02
CCS-206ENST00000530961 PLEKHG3A1L390 1219 aa21.42■■□□□ 1.02
CCS-206ENST00000530961 CCDC125Q86Z20 511 aa21.42■■□□□ 1.02
CCS-206ENST00000530961 CDCA8Q53HL2 280 aa21.41■■□□□ 1.02
CCS-206ENST00000530961 PMFBP1Q8TBY8 1022 aa21.41■■□□□ 1.02
CCS-206ENST00000530961 SOS2Q07890 1332 aaPredicted RBP21.4■■□□□ 1.02
CCS-206ENST00000530961 HSPA5P11021 654 aaKnown RBP21.4■■□□□ 1.02
CCS-206ENST00000530961 NGDNQ8NEJ9 315 aaKnown RBP21.4■■□□□ 1.02
CCS-206ENST00000530961 DDX17Q92841 729 aaKnown RBP21.4■■□□□ 1.02
CCS-206ENST00000530961 LRRC59Q96AG4 307 aaKnown RBP21.4■■□□□ 1.02
CCS-206ENST00000530961 PSME1Q06323 249 aa21.39■■□□□ 1.01
CCS-206ENST00000530961 AHDC1Q5TGY3 1603 aaPredicted RBP21.39■■□□□ 1.01
CCS-206ENST00000530961 ATP7BP35670 1465 aa21.39■■□□□ 1.01
CCS-206ENST00000530961 CABP1Q9NZU7 370 aa21.38■■□□□ 1.01
CCS-206ENST00000530961 KRT28Q7Z3Y7 464 aa21.37■■□□□ 1.01
CCS-206ENST00000530961 FMN2Q9NZ56 1722 aa21.37■■□□□ 1.01
CCS-206ENST00000530961 LRP5O75197 1615 aa21.36■■□□□ 1.01
CCS-206ENST00000530961 IFFO2Q5TF58 517 aa21.35■■□□□ 1.01
CCS-206ENST00000530961 C8orf37Q96NL8 207 aa21.35■■□□□ 1.01
CCS-206ENST00000530961 ACEP12821 1306 aa21.34■■□□□ 1.01
CCS-206ENST00000530961 PPIP5K1Q6PFW1 1433 aa21.34■■□□□ 1.01
CCS-206ENST00000530961 POLR3AO14802 1390 aaPredicted RBP21.34■■□□□ 1.01
CCS-206ENST00000530961 XPCQ01831 940 aaPredicted RBP21.33■■□□□ 1.01
CCS-206ENST00000530961 QRICH2Q9H0J4 1663 aa21.33■■□□□ 1
CCS-206ENST00000530961 ZNF692Q9BU19 519 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms