RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 DDX17Q92841 729 aaKnown RBP27.11■■□□□ 1.93
PSMC3-208ENST00000530887 ORAI2Q96SN7 254 aa27.11■■□□□ 1.93
PSMC3-208ENST00000530887 MPHOSPH9Q99550 1183 aa27.11■■□□□ 1.93
PSMC3-208ENST00000530887 SPATA31E1Q6ZUB1 1445 aa27.1■■□□□ 1.93
PSMC3-208ENST00000530887 ABCC11Q96J66 1382 aa27.09■■□□□ 1.93
PSMC3-208ENST00000530887 ADGRF5Q8IZF2 1346 aa27.07■■□□□ 1.92
PSMC3-208ENST00000530887 COL22A1Q8NFW1 1626 aaPredicted RBP27.06■■□□□ 1.92
PSMC3-208ENST00000530887 ESCO1Q5FWF5 840 aa27.06■■□□□ 1.92
PSMC3-208ENST00000530887 RGL3Q3MIN7 710 aa27.05■■□□□ 1.92
PSMC3-208ENST00000530887 SIRT1Q96EB6 747 aa27.05■■□□□ 1.92
PSMC3-208ENST00000530887 TRPC5Q9UL62 973 aaPredicted RBP27.05■■□□□ 1.92
PSMC3-208ENST00000530887 KNDC1Q76NI1 1749 aa27.04■■□□□ 1.92
PSMC3-208ENST00000530887 ADAMTS2O95450 1211 aa27.04■■□□□ 1.92
PSMC3-208ENST00000530887 FOXD1Q16676 465 aa27.04■■□□□ 1.92
PSMC3-208ENST00000530887 PIK3C2GO75747 1445 aa27.04■■□□□ 1.92
PSMC3-208ENST00000530887 IFT172Q9UG01 1749 aa27.04■■□□□ 1.92
PSMC3-208ENST00000530887 FNBP4Q8N3X1 1017 aaPredicted RBP27.03■■□□□ 1.92
PSMC3-208ENST00000530887 USP21Q9UK80 565 aa27.02■■□□□ 1.92
PSMC3-208ENST00000530887 RGS12O14924 1447 aa27■■□□□ 1.91
PSMC3-208ENST00000530887 MYOM2P54296 1465 aa26.99■■□□□ 1.91
PSMC3-208ENST00000530887 STK26Q9P289 416 aa26.98■■□□□ 1.91
PSMC3-208ENST00000530887 PXDNQ92626 1479 aa26.98■■□□□ 1.91
PSMC3-208ENST00000530887 YTHDC2Q9H6S0 1430 aaKnown RBP26.98■■□□□ 1.91
PSMC3-208ENST00000530887 ATAD2Q6PL18 1390 aa26.97■■□□□ 1.91
PSMC3-208ENST00000530887 KIF1AQ12756 1690 aa26.96■■□□□ 1.91
PSMC3-208ENST00000530887 DHX57Q6P158 1386 aaKnown RBP26.96■■□□□ 1.91
PSMC3-208ENST00000530887 FOXO3O43524 673 aa26.95■■□□□ 1.9
PSMC3-208ENST00000530887 WAPLQ7Z5K2 1190 aa26.94■■□□□ 1.9
PSMC3-208ENST00000530887 C14orf93Q9H972 538 aaKnown RBP26.94■■□□□ 1.9
PSMC3-208ENST00000530887 ATRNO75882 1429 aa26.93■■□□□ 1.9
PSMC3-208ENST00000530887 NRXN1Q9ULB1 1477 aa26.92■■□□□ 1.9
PSMC3-208ENST00000530887 TMEM132EQ6IEE7 984 aa26.91■■□□□ 1.9
PSMC3-208ENST00000530887 FMN2Q9NZ56 1722 aa26.9■■□□□ 1.9
PSMC3-208ENST00000530887 PSME1Q06323 249 aa26.89■■□□□ 1.9
PSMC3-208ENST00000530887 STAC3Q96MF2 364 aa26.89■■□□□ 1.9
PSMC3-208ENST00000530887 MARF1Q9Y4F3 1742 aaKnown RBP26.89■■□□□ 1.9
PSMC3-208ENST00000530887 SPATA31A3Q5VYP0 1347 aa26.87■■□□□ 1.89
PSMC3-208ENST00000530887 CCDC125Q86Z20 511 aa26.86■■□□□ 1.89
PSMC3-208ENST00000530887 PLEKHH1Q9ULM0 1364 aa26.85■■□□□ 1.89
PSMC3-208ENST00000530887 DLC1Q96QB1 1528 aa26.84■■□□□ 1.89
PSMC3-208ENST00000530887 BCL9LQ86UU0 1499 aa26.83■■□□□ 1.89
PSMC3-208ENST00000530887 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.83■■□□□ 1.89
PSMC3-208ENST00000530887 NUTM2FA1L443 756 aa26.83■■□□□ 1.89
PSMC3-208ENST00000530887 KRT28Q7Z3Y7 464 aa26.83■■□□□ 1.89
PSMC3-208ENST00000530887 PHF8Q9UPP1 1060 aa26.83■■□□□ 1.89
PSMC3-208ENST00000530887 EIF3AQ14152 1382 aaKnown RBP26.83■■□□□ 1.88
PSMC3-208ENST00000530887 XPCQ01831 940 aaPredicted RBP26.82■■□□□ 1.88
PSMC3-208ENST00000530887 GJD4Q96KN9 370 aaPredicted RBP26.82■■□□□ 1.88
PSMC3-208ENST00000530887 SBNO1A3KN83 1393 aa26.81■■□□□ 1.88
PSMC3-208ENST00000530887 ANKARQ7Z5J8 1434 aa26.81■■□□□ 1.88
PSMC3-208ENST00000530887 CFAP70Q5T0N1 1121 aa26.8■■□□□ 1.88
PSMC3-208ENST00000530887 UNC5CLQ8IV45 518 aa26.8■■□□□ 1.88
PSMC3-208ENST00000530887 ARHGEF10O15013 1369 aa26.8■■□□□ 1.88
PSMC3-208ENST00000530887 TNS3Q68CZ2 1445 aa26.8■■□□□ 1.88
PSMC3-208ENST00000530887 POGKQ9P215 609 aa26.79■■□□□ 1.88
PSMC3-208ENST00000530887 HAP1P54257 671 aaPredicted RBP26.78■■□□□ 1.88
PSMC3-208ENST00000530887 RAB3GAP2Q9H2M9 1393 aa26.78■■□□□ 1.88
PSMC3-208ENST00000530887 SLIT2O94813 1529 aa26.77■■□□□ 1.88
PSMC3-208ENST00000530887 PRAM1Q96QH2 718 aa26.77■■□□□ 1.88
PSMC3-208ENST00000530887 HRCP23327 699 aa26.76■■□□□ 1.87
PSMC3-208ENST00000530887 USP32Q8NFA0 1604 aa26.76■■□□□ 1.87
PSMC3-208ENST00000530887 ADGRB2O60241 1585 aa26.75■■□□□ 1.87
PSMC3-208ENST00000530887 ZRANB1Q9UGI0 708 aa26.69■■□□□ 1.86
PSMC3-208ENST00000530887 GPRASP1Q5JY77 1395 aa26.69■■□□□ 1.86
PSMC3-208ENST00000530887 RALGAPBQ86X10 1494 aa26.68■■□□□ 1.86
PSMC3-208ENST00000530887 NWD2Q9ULI1 1742 aa26.68■■□□□ 1.86
PSMC3-208ENST00000530887 ADGRB1O14514 1584 aa26.68■■□□□ 1.86
PSMC3-208ENST00000530887 VPS72Q15906 364 aa26.68■■□□□ 1.86
PSMC3-208ENST00000530887 RGPD8O14715 1765 aaPredicted RBP26.68■■□□□ 1.86
PSMC3-208ENST00000530887 SAFB2Q14151 953 aaKnown RBP eCLIP26.67■■□□□ 1.86
PSMC3-208ENST00000530887 LMOD2Q6P5Q4 547 aa26.64■■□□□ 1.86
PSMC3-208ENST00000530887 DCAF11Q8TEB1 546 aa26.64■■□□□ 1.86
PSMC3-208ENST00000530887 BLMP54132 1417 aaPredicted RBP26.64■■□□□ 1.85
PSMC3-208ENST00000530887 TRAK1Q9UPV9 953 aa26.63■■□□□ 1.85
PSMC3-208ENST00000530887 TULP4Q9NRJ4 1543 aa26.63■■□□□ 1.85
PSMC3-208ENST00000530887 GLI3P10071 1580 aa26.63■■□□□ 1.85
PSMC3-208ENST00000530887 ONECUT3O60422 494 aaPredicted RBP26.61■■□□□ 1.85
PSMC3-208ENST00000530887 SF3B2Q13435 895 aaKnown RBP26.61■■□□□ 1.85
PSMC3-208ENST00000530887 WASLO00401 505 aaPredicted RBP26.6■■□□□ 1.85
PSMC3-208ENST00000530887 PMFBP1Q8TBY8 1022 aa26.6■■□□□ 1.85
PSMC3-208ENST00000530887 EP400Q96L91 3159 aa26.59■■□□□ 1.85
PSMC3-208ENST00000530887 PLCH1Q4KWH8 1693 aa26.58■■□□□ 1.85
PSMC3-208ENST00000530887 SEPT12Q8IYM1 358 aa26.58■■□□□ 1.85
PSMC3-208ENST00000530887 KDM2AQ9Y2K7 1162 aa26.58■■□□□ 1.85
PSMC3-208ENST00000530887 CCDC9Q9Y3X0 531 aaKnown RBP26.58■■□□□ 1.85
PSMC3-208ENST00000530887 ABCA3Q99758 1704 aa26.58■■□□□ 1.85
PSMC3-208ENST00000530887 CABLES1Q8TDN4 633 aa26.57■■□□□ 1.84
PSMC3-208ENST00000530887 MINK1Q8N4C8 1332 aaPredicted RBP26.56■■□□□ 1.84
PSMC3-208ENST00000530887 NGDNQ8NEJ9 315 aaKnown RBP26.55■■□□□ 1.84
PSMC3-208ENST00000530887 TRPM3Q9HCF6 1732 aaPredicted RBP26.54■■□□□ 1.84
PSMC3-208ENST00000530887 HIRIP3Q9BW71 556 aaPredicted RBP26.54■■□□□ 1.84
PSMC3-208ENST00000530887 KRT27Q7Z3Y8 459 aa26.53■■□□□ 1.84
PSMC3-208ENST00000530887 ALS2Q96Q42 1657 aa26.53■■□□□ 1.84
PSMC3-208ENST00000530887 ITSN1Q15811 1721 aa26.53■■□□□ 1.84
PSMC3-208ENST00000530887 FAM83GA6ND36 823 aa26.52■■□□□ 1.84
PSMC3-208ENST00000530887 COL14A1Q05707 1796 aaKnown RBP26.52■■□□□ 1.84
PSMC3-208ENST00000530887 PRR36Q9H6K5 1346 aa26.5■■□□□ 1.83
PSMC3-208ENST00000530887 BRWD3Q6RI45 1802 aa26.49■■□□□ 1.83
PSMC3-208ENST00000530887 BTG4Q9NY30 223 aa26.48■■□□□ 1.83
PSMC3-208ENST00000530887 ATP7BP35670 1465 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms