RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CCDC141Q6ZP82 1450 aa10.21□□□□□ -0.78
CSDE1-214ENST00000530886 PRDM10Q9NQV6 1147 aa10.2□□□□□ -0.78
CSDE1-214ENST00000530886 ADAMTS8Q9UP79 889 aa10.2□□□□□ -0.78
CSDE1-214ENST00000530886 IQGAP3Q86VI3 1631 aa10.2□□□□□ -0.78
CSDE1-214ENST00000530886 SMC5Q8IY18 1101 aa10.2□□□□□ -0.78
CSDE1-214ENST00000530886 SNX21Q969T3 373 aa10.2□□□□□ -0.78
CSDE1-214ENST00000530886 CARD11Q9BXL7 1154 aa10.2□□□□□ -0.78
CSDE1-214ENST00000530886 ZKSCAN5Q9Y2L8 839 aa10.2□□□□□ -0.78
CSDE1-214ENST00000530886 ZNF445P59923 1031 aa10.2□□□□□ -0.78
CSDE1-214ENST00000530886 PDE3AQ14432 1141 aa10.2□□□□□ -0.78
CSDE1-214ENST00000530886 RAB3GAP1Q15042 981 aa10.2□□□□□ -0.78
CSDE1-214ENST00000530886 ANKRD50Q9ULJ7 1429 aa10.19□□□□□ -0.78
CSDE1-214ENST00000530886 SPHKAPQ2M3C7 1700 aa10.19□□□□□ -0.78
CSDE1-214ENST00000530886 IQSEC2Q5JU85 1478 aa10.19□□□□□ -0.78
CSDE1-214ENST00000530886 MYRIPQ8NFW9 859 aa10.19□□□□□ -0.78
CSDE1-214ENST00000530886 PKD2Q13563 968 aa10.18□□□□□ -0.78
CSDE1-214ENST00000530886 ATP10AO60312 1499 aa10.18□□□□□ -0.78
CSDE1-214ENST00000530886 ERBINQ96RT1 1412 aa10.18□□□□□ -0.78
CSDE1-214ENST00000530886 FTSJ3Q8IY81 847 aaKnown RBP10.17□□□□□ -0.78
CSDE1-214ENST00000530886 TNPO1Q92973 898 aaKnown RBP10.17□□□□□ -0.78
CSDE1-214ENST00000530886 KLHL40Q2TBA0 621 aa10.17□□□□□ -0.78
CSDE1-214ENST00000530886 CDC42BPBQ9Y5S2 1711 aa10.17□□□□□ -0.78
CSDE1-214ENST00000530886 NUP160Q12769 1436 aa10.17□□□□□ -0.78
CSDE1-214ENST00000530886 PRIMPOLQ96LW4 560 aa10.17□□□□□ -0.78
CSDE1-214ENST00000530886 CHRM1P11229 460 aaPredicted RBP10.16□□□□□ -0.78
CSDE1-214ENST00000530886 GOLGA2Q08379 1002 aa10.16□□□□□ -0.78
CSDE1-214ENST00000530886 ZNF830Q96NB3 372 aaPredicted RBP10.16□□□□□ -0.78
CSDE1-214ENST00000530886 PPRC1Q5VV67 1664 aaKnown RBP10.16□□□□□ -0.78
CSDE1-214ENST00000530886 TROQ12816 1431 aaPredicted RBP10.16□□□□□ -0.78
CSDE1-214ENST00000530886 CLUAP1Q96AJ1 413 aa10.16□□□□□ -0.78
CSDE1-214ENST00000530886 KIAA1210Q9ULL0 1709 aa10.16□□□□□ -0.78
CSDE1-214ENST00000530886 NPC1L1Q9UHC9 1359 aa10.16□□□□□ -0.78
CSDE1-214ENST00000530886 ASXL1Q8IXJ9 1541 aa10.15□□□□□ -0.78
CSDE1-214ENST00000530886 HMGN5P82970 282 aaKnown RBP10.15□□□□□ -0.78
CSDE1-214ENST00000530886 PMFBP1Q8TBY8 1022 aa10.15□□□□□ -0.78
CSDE1-214ENST00000530886 DMRT2Q9Y5R5 561 aa10.15□□□□□ -0.78
CSDE1-214ENST00000530886 MAST1Q9Y2H9 1570 aa10.15□□□□□ -0.78
CSDE1-214ENST00000530886 AMER1Q5JTC6 1135 aaPredicted RBP10.15□□□□□ -0.78
CSDE1-214ENST00000530886 HSCBQ8IWL3 235 aa10.15□□□□□ -0.78
CSDE1-214ENST00000530886 C22orf23Q9BZE7 217 aa10.15□□□□□ -0.78
CSDE1-214ENST00000530886 ABCA8O94911 1581 aa10.15□□□□□ -0.79
CSDE1-214ENST00000530886 TDRD9Q8NDG6 1382 aaKnown RBP10.15□□□□□ -0.79
CSDE1-214ENST00000530886 BCAR3O75815 825 aa10.15□□□□□ -0.79
CSDE1-214ENST00000530886 AK9Q5TCS8 1911 aa10.14□□□□□ -0.79
CSDE1-214ENST00000530886 XPCQ01831 940 aaPredicted RBP10.14□□□□□ -0.79
CSDE1-214ENST00000530886 ZNF710Q8N1W2 664 aa10.14□□□□□ -0.79
CSDE1-214ENST00000530886 CLTCL1P53675 1640 aa10.14□□□□□ -0.79
CSDE1-214ENST00000530886 CCDC39Q9UFE4 941 aa10.14□□□□□ -0.79
CSDE1-214ENST00000530886 PRG4Q92954 1404 aaPredicted RBP10.13□□□□□ -0.79
CSDE1-214ENST00000530886 KDM5AP29375 1690 aaKnown RBP10.13□□□□□ -0.79
CSDE1-214ENST00000530886 PPP2R1AP30153 589 aa10.13□□□□□ -0.79
CSDE1-214ENST00000530886 TEX2Q8IWB9 1127 aa10.13□□□□□ -0.79
CSDE1-214ENST00000530886 MYO3AQ8NEV4 1616 aa10.12□□□□□ -0.79
CSDE1-214ENST00000530886 NGEFQ8N5V2 710 aa10.12□□□□□ -0.79
CSDE1-214ENST00000530886 POLR3GLQ9BT43 218 aa10.12□□□□□ -0.79
CSDE1-214ENST00000530886 ZC3H13Q5T200 1668 aaKnown RBP10.12□□□□□ -0.79
CSDE1-214ENST00000530886 YEATS2Q9ULM3 1422 aa10.12□□□□□ -0.79
CSDE1-214ENST00000530886 ADGRB2O60241 1585 aa10.12□□□□□ -0.79
CSDE1-214ENST00000530886 NBPF1Q3BBV0 1214 aa10.12□□□□□ -0.79
CSDE1-214ENST00000530886 PANK3Q9H999 370 aa10.12□□□□□ -0.79
CSDE1-214ENST00000530886 SAMD9LQ8IVG5 1584 aa10.11□□□□□ -0.79
CSDE1-214ENST00000530886 ABCA6Q8N139 1617 aa10.11□□□□□ -0.79
CSDE1-214ENST00000530886 PHF23Q9BUL5 403 aaPredicted RBP10.11□□□□□ -0.79
CSDE1-214ENST00000530886 C9orf84Q5VXU9 1444 aa10.11□□□□□ -0.79
CSDE1-214ENST00000530886 ATP2B3Q16720 1220 aa10.1□□□□□ -0.79
CSDE1-214ENST00000530886 CFAP74Q9C0B2 1584 aa10.1□□□□□ -0.79
CSDE1-214ENST00000530886 IFT172Q9UG01 1749 aa10.1□□□□□ -0.79
CSDE1-214ENST00000530886 PREX2Q70Z35 1606 aa10.1□□□□□ -0.79
CSDE1-214ENST00000530886 DUOX2Q9NRD8 1548 aa10.1□□□□□ -0.79
CSDE1-214ENST00000530886 GOLGA6L22H0YM25 854 aa10.1□□□□□ -0.79
CSDE1-214ENST00000530886 DNAJC5Q9H3Z4 198 aa10.1□□□□□ -0.79
CSDE1-214ENST00000530886 PCDHB15Q9Y5E8 787 aa10.1□□□□□ -0.79
CSDE1-214ENST00000530886 USP32Q8NFA0 1604 aa10.1□□□□□ -0.79
CSDE1-214ENST00000530886 INO80Q9ULG1 1556 aaPredicted RBP10.1□□□□□ -0.79
CSDE1-214ENST00000530886 UHRF1BP1LA0JNW5 1464 aa10.1□□□□□ -0.79
CSDE1-214ENST00000530886 FEZ1Q99689 392 aa10.1□□□□□ -0.79
CSDE1-214ENST00000530886 GABPB1Q06547 395 aaPredicted RBP10.09□□□□□ -0.79
CSDE1-214ENST00000530886 CC2D1BQ5T0F9 858 aaKnown RBP10.09□□□□□ -0.79
CSDE1-214ENST00000530886 SPRYD3Q8NCJ5 442 aa10.09□□□□□ -0.79
CSDE1-214ENST00000530886 KANK1Q14678 1352 aa10.09□□□□□ -0.79
CSDE1-214ENST00000530886 TTC37Q6PGP7 1564 aa10.09□□□□□ -0.79
CSDE1-214ENST00000530886 CBX1P83916 185 aa10.09□□□□□ -0.79
CSDE1-214ENST00000530886 PAXIP1Q6ZW49 1069 aaPredicted RBP10.09□□□□□ -0.79
CSDE1-214ENST00000530886 DNAJC2Q99543 621 aaKnown RBP10.09□□□□□ -0.79
CSDE1-214ENST00000530886 KIF2CQ99661 725 aa10.08□□□□□ -0.8
CSDE1-214ENST00000530886 PDZRN3Q9UPQ7 1066 aa10.08□□□□□ -0.8
CSDE1-214ENST00000530886 E9PSI1 815 aa10.08□□□□□ -0.8
CSDE1-214ENST00000530886 KIAA2012Q0VF49 1180 aa10.08□□□□□ -0.8
CSDE1-214ENST00000530886 NUP155O75694 1391 aa10.08□□□□□ -0.8
CSDE1-214ENST00000530886 ANKRD7Q92527 254 aa10.08□□□□□ -0.8
CSDE1-214ENST00000530886 RBSNQ9H1K0 784 aa10.07□□□□□ -0.8
CSDE1-214ENST00000530886 NEURL4Q96JN8 1562 aa10.07□□□□□ -0.8
CSDE1-214ENST00000530886 RLBP1P12271 317 aa10.07□□□□□ -0.8
CSDE1-214ENST00000530886 FAM193AP78312 1265 aa10.07□□□□□ -0.8
CSDE1-214ENST00000530886 IRX5P78411 483 aaPredicted RBP10.07□□□□□ -0.8
CSDE1-214ENST00000530886 ZSCAN23Q3MJ62 389 aa10.06□□□□□ -0.8
CSDE1-214ENST00000530886 TUBGCP6Q96RT7 1819 aa10.06□□□□□ -0.8
CSDE1-214ENST00000530886 CDK11BP21127 795 aaKnown RBP10.06□□□□□ -0.8
CSDE1-214ENST00000530886 TULP2O00295 520 aa10.05□□□□□ -0.8
CSDE1-214ENST00000530886 RWDD1Q9H446 243 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms