RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 KCNA6P17658 529 aa19.35■□□□□ 0.69
NXF1-207ENST00000530875 CDCA8Q53HL2 280 aa19.34■□□□□ 0.69
NXF1-207ENST00000530875 PTCH1Q13635 1447 aa19.34■□□□□ 0.69
NXF1-207ENST00000530875 TULP4Q9NRJ4 1543 aa19.33■□□□□ 0.68
NXF1-207ENST00000530875 EVC2Q86UK5 1308 aa19.32■□□□□ 0.68
NXF1-207ENST00000530875 CHD2O14647 1828 aaKnown RBP19.32■□□□□ 0.68
NXF1-207ENST00000530875 CABP2Q9NPB3 220 aa19.28■□□□□ 0.68
NXF1-207ENST00000530875 NWD1Q149M9 1564 aa19.28■□□□□ 0.68
NXF1-207ENST00000530875 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.27■□□□□ 0.68
NXF1-207ENST00000530875 SRPK2P78362 688 aaKnown RBP19.27■□□□□ 0.67
NXF1-207ENST00000530875 CDK19Q9BWU1 502 aa19.27■□□□□ 0.67
NXF1-207ENST00000530875 WASLO00401 505 aaPredicted RBP19.25■□□□□ 0.67
NXF1-207ENST00000530875 RBM33Q96EV2 1170 aaKnown RBP19.25■□□□□ 0.67
NXF1-207ENST00000530875 PUS7Q96PZ0 661 aaKnown RBP19.24■□□□□ 0.67
NXF1-207ENST00000530875 MIER1Q8N108 512 aa19.23■□□□□ 0.67
NXF1-207ENST00000530875 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
NXF1-207ENST00000530875 MYOM1P52179 1685 aa19.22■□□□□ 0.67
NXF1-207ENST00000530875 DMRT2Q9Y5R5 561 aa19.22■□□□□ 0.67
NXF1-207ENST00000530875 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
NXF1-207ENST00000530875 NKTRP30414 1462 aaKnown RBP19.21■□□□□ 0.67
NXF1-207ENST00000530875 PROSER2Q86WR7 435 aaPredicted RBP19.21■□□□□ 0.67
NXF1-207ENST00000530875 PANK3Q9H999 370 aa19.21■□□□□ 0.67
NXF1-207ENST00000530875 STRCP1A6NGW2 1772 aa19.21■□□□□ 0.67
NXF1-207ENST00000530875 ATAD2Q6PL18 1390 aa19.2■□□□□ 0.66
NXF1-207ENST00000530875 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
NXF1-207ENST00000530875 SLC12A5Q9H2X9 1139 aa19.19■□□□□ 0.66
NXF1-207ENST00000530875 ZNF335Q9H4Z2 1342 aaPredicted RBP19.18■□□□□ 0.66
NXF1-207ENST00000530875 NALCNQ8IZF0 1738 aa19.17■□□□□ 0.66
NXF1-207ENST00000530875 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
NXF1-207ENST00000530875 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
NXF1-207ENST00000530875 NUTM2FA1L443 756 aa19.16■□□□□ 0.66
NXF1-207ENST00000530875 NUDT16Q96DE0 195 aaKnown RBP19.16■□□□□ 0.66
NXF1-207ENST00000530875 PRR36Q9H6K5 1346 aa19.15■□□□□ 0.66
NXF1-207ENST00000530875 TMEM94Q12767 1356 aa19.15■□□□□ 0.66
NXF1-207ENST00000530875 ATP7BP35670 1465 aa19.15■□□□□ 0.66
NXF1-207ENST00000530875 NINLQ9Y2I6 1382 aa19.14■□□□□ 0.66
NXF1-207ENST00000530875 PER1O15534 1290 aaPredicted RBP19.14■□□□□ 0.65
NXF1-207ENST00000530875 CABP1Q9NZU7 370 aa19.14■□□□□ 0.65
NXF1-207ENST00000530875 CDC42BPGQ6DT37 1551 aa19.13■□□□□ 0.65
NXF1-207ENST00000530875 ANP32CO43423 234 aa19.13■□□□□ 0.65
NXF1-207ENST00000530875 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
NXF1-207ENST00000530875 PPIP5K1Q6PFW1 1433 aa19.12■□□□□ 0.65
NXF1-207ENST00000530875 CCDC61Q9Y6R9 512 aa19.12■□□□□ 0.65
NXF1-207ENST00000530875 CNGB1Q14028 1251 aaPredicted RBP19.12■□□□□ 0.65
NXF1-207ENST00000530875 CARD14Q9BXL6 1004 aa19.12■□□□□ 0.65
NXF1-207ENST00000530875 ANKRD36BQ8N2N9 1353 aa19.11■□□□□ 0.65
NXF1-207ENST00000530875 USP32Q8NFA0 1604 aa19.1■□□□□ 0.65
NXF1-207ENST00000530875 FMN2Q9NZ56 1722 aa19.1■□□□□ 0.65
NXF1-207ENST00000530875 KNSTRNQ9Y448 316 aa19.1■□□□□ 0.65
NXF1-207ENST00000530875 NCOA3Q9Y6Q9 1424 aa19.09■□□□□ 0.65
NXF1-207ENST00000530875 CD163L1Q9NR16 1453 aa19.09■□□□□ 0.65
NXF1-207ENST00000530875 LRRC7Q96NW7 1537 aa19.09■□□□□ 0.65
NXF1-207ENST00000530875 C19orf44Q9H6X5 657 aa19.09■□□□□ 0.65
NXF1-207ENST00000530875 TERF2IPQ9NYB0 399 aa19.09■□□□□ 0.65
NXF1-207ENST00000530875 A0A1W2PP64 1363 aa19.09■□□□□ 0.65
NXF1-207ENST00000530875 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.64
NXF1-207ENST00000530875 TOPAZ1Q8N9V7 1692 aa19.07■□□□□ 0.64
NXF1-207ENST00000530875 NSD3Q9BZ95 1437 aa19.07■□□□□ 0.64
NXF1-207ENST00000530875 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
NXF1-207ENST00000530875 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
NXF1-207ENST00000530875 PRKRIP1Q9H875 184 aaPredicted RBP19.06■□□□□ 0.64
NXF1-207ENST00000530875 CC2D1BQ5T0F9 858 aaKnown RBP19.05■□□□□ 0.64
NXF1-207ENST00000530875 PLEKHG3A1L390 1219 aa19.04■□□□□ 0.64
NXF1-207ENST00000530875 AMER1Q5JTC6 1135 aaPredicted RBP19.04■□□□□ 0.64
NXF1-207ENST00000530875 YTHDC1Q96MU7 727 aaKnown RBP19.04■□□□□ 0.64
NXF1-207ENST00000530875 XIRP1Q702N8 1843 aaKnown RBP19.04■□□□□ 0.64
NXF1-207ENST00000530875 PMFBP1Q8TBY8 1022 aa19.04■□□□□ 0.64
NXF1-207ENST00000530875 RGPD8O14715 1765 aaPredicted RBP19.04■□□□□ 0.64
NXF1-207ENST00000530875 CPSF1Q10570 1443 aaKnown RBP19.03■□□□□ 0.64
NXF1-207ENST00000530875 MSH6P52701 1360 aa19.03■□□□□ 0.64
NXF1-207ENST00000530875 ATF3P18847 181 aa19.03■□□□□ 0.64
NXF1-207ENST00000530875 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
NXF1-207ENST00000530875 ITSN1Q15811 1721 aa19.02■□□□□ 0.64
NXF1-207ENST00000530875 DCCP43146 1447 aa19.02■□□□□ 0.64
NXF1-207ENST00000530875 ACEP12821 1306 aa19.02■□□□□ 0.64
NXF1-207ENST00000530875 ESCO1Q5FWF5 840 aa19■□□□□ 0.63
NXF1-207ENST00000530875 CADPS2Q86UW7 1296 aa19■□□□□ 0.63
NXF1-207ENST00000530875 CGNL1Q0VF96 1302 aa18.99■□□□□ 0.63
NXF1-207ENST00000530875 NPC1L1Q9UHC9 1359 aa18.99■□□□□ 0.63
NXF1-207ENST00000530875 NGDNQ8NEJ9 315 aaKnown RBP18.99■□□□□ 0.63
NXF1-207ENST00000530875 ZNF692Q9BU19 519 aaPredicted RBP18.99■□□□□ 0.63
NXF1-207ENST00000530875 LTBP4Q8N2S1 1624 aa18.99■□□□□ 0.63
NXF1-207ENST00000530875 POLR3AO14802 1390 aaPredicted RBP18.98■□□□□ 0.63
NXF1-207ENST00000530875 ORAI2Q96SN7 254 aa18.98■□□□□ 0.63
NXF1-207ENST00000530875 PHF8Q9UPP1 1060 aa18.98■□□□□ 0.63
NXF1-207ENST00000530875 MST1RQ04912 1400 aa18.98■□□□□ 0.63
NXF1-207ENST00000530875 C1orf167Q5SNV9 1468 aa18.98■□□□□ 0.63
NXF1-207ENST00000530875 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
NXF1-207ENST00000530875 PARD3Q8TEW0 1356 aa18.98■□□□□ 0.63
NXF1-207ENST00000530875 RALBP1Q15311 655 aa18.98■□□□□ 0.63
NXF1-207ENST00000530875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.97■□□□□ 0.63
NXF1-207ENST00000530875 MON2Q7Z3U7 1717 aa18.97■□□□□ 0.63
NXF1-207ENST00000530875 EDC4Q6P2E9 1401 aaKnown RBP18.96■□□□□ 0.63
NXF1-207ENST00000530875 USP6P35125 1406 aa18.96■□□□□ 0.63
NXF1-207ENST00000530875 CCER2I3L3R5 266 aa18.94■□□□□ 0.62
NXF1-207ENST00000530875 FYB1O15117 783 aa18.94■□□□□ 0.62
NXF1-207ENST00000530875 GGNBP2Q9H3C7 697 aa18.94■□□□□ 0.62
NXF1-207ENST00000530875 NSD2O96028 1365 aa18.93■□□□□ 0.62
NXF1-207ENST00000530875 MYBBP1AQ9BQG0 1328 aaKnown RBP18.92■□□□□ 0.62
NXF1-207ENST00000530875 NRKQ7Z2Y5 1582 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms