RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
CTSF-208ENST00000530565 LRRC59Q96AG4 307 aaKnown RBP12.43□□□□□ -0.42
CTSF-208ENST00000530565 RBM6P78332 1123 aaKnown RBP12.42□□□□□ -0.42
CTSF-208ENST00000530565 NEUROD1Q13562 356 aa12.42□□□□□ -0.42
CTSF-208ENST00000530565 C8orf37Q96NL8 207 aa12.42□□□□□ -0.42
CTSF-208ENST00000530565 QTRT2Q9H974 415 aaKnown RBP12.42□□□□□ -0.42
CTSF-208ENST00000530565 MYOM2P54296 1465 aa12.41□□□□□ -0.42
CTSF-208ENST00000530565 CCER1Q8TC90 406 aaPredicted RBP12.41□□□□□ -0.42
CTSF-208ENST00000530565 COL22A1Q8NFW1 1626 aaPredicted RBP12.4□□□□□ -0.42
CTSF-208ENST00000530565 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.42
CTSF-208ENST00000530565 ADGRF5Q8IZF2 1346 aa12.4□□□□□ -0.42
CTSF-208ENST00000530565 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
CTSF-208ENST00000530565 DCAF11Q8TEB1 546 aa12.4□□□□□ -0.42
CTSF-208ENST00000530565 NRXN1Q9ULB1 1477 aa12.39□□□□□ -0.43
CTSF-208ENST00000530565 PTCH1Q13635 1447 aa12.38□□□□□ -0.43
CTSF-208ENST00000530565 PRAG1Q86YV5 1406 aa12.38□□□□□ -0.43
CTSF-208ENST00000530565 STAC3Q96MF2 364 aa12.38□□□□□ -0.43
CTSF-208ENST00000530565 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
CTSF-208ENST00000530565 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
CTSF-208ENST00000530565 ADAMTS2O95450 1211 aa12.37□□□□□ -0.43
CTSF-208ENST00000530565 L3MBTL2Q969R5 705 aa12.37□□□□□ -0.43
CTSF-208ENST00000530565 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
CTSF-208ENST00000530565 MARF1Q9Y4F3 1742 aaKnown RBP12.37□□□□□ -0.43
CTSF-208ENST00000530565 ATRNO75882 1429 aa12.37□□□□□ -0.43
CTSF-208ENST00000530565 ATAD2Q6PL18 1390 aa12.36□□□□□ -0.43
CTSF-208ENST00000530565 TONSLQ96HA7 1378 aa12.36□□□□□ -0.43
CTSF-208ENST00000530565 ROBO2Q9HCK4 1378 aa12.36□□□□□ -0.43
CTSF-208ENST00000530565 FNBP4Q8N3X1 1017 aaPredicted RBP12.35□□□□□ -0.43
CTSF-208ENST00000530565 NGLY1Q96IV0 654 aa12.35□□□□□ -0.43
CTSF-208ENST00000530565 ORAI2Q96SN7 254 aa12.35□□□□□ -0.43
CTSF-208ENST00000530565 USP21Q9UK80 565 aa12.34□□□□□ -0.43
CTSF-208ENST00000530565 C14orf93Q9H972 538 aaKnown RBP12.33□□□□□ -0.44
CTSF-208ENST00000530565 BCL9LQ86UU0 1499 aa12.33□□□□□ -0.44
CTSF-208ENST00000530565 CFAP70Q5T0N1 1121 aa12.32□□□□□ -0.44
CTSF-208ENST00000530565 TRPC5Q9UL62 973 aaPredicted RBP12.32□□□□□ -0.44
CTSF-208ENST00000530565 PXDNQ92626 1479 aa12.32□□□□□ -0.44
CTSF-208ENST00000530565 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.31□□□□□ -0.44
CTSF-208ENST00000530565 CDC42BPGQ6DT37 1551 aa12.31□□□□□ -0.44
CTSF-208ENST00000530565 ZEB1P37275 1124 aaPredicted RBP12.31□□□□□ -0.44
CTSF-208ENST00000530565 KIAA1210Q9ULL0 1709 aa12.31□□□□□ -0.44
CTSF-208ENST00000530565 TMEM132EQ6IEE7 984 aa12.29□□□□□ -0.44
CTSF-208ENST00000530565 TIMELESSQ9UNS1 1208 aa12.29□□□□□ -0.44
CTSF-208ENST00000530565 GLI3P10071 1580 aa12.29□□□□□ -0.44
CTSF-208ENST00000530565 ADGRB1O14514 1584 aa12.28□□□□□ -0.44
CTSF-208ENST00000530565 TRPM1Q7Z4N2 1603 aa12.27□□□□□ -0.44
CTSF-208ENST00000530565 KNDC1Q76NI1 1749 aa12.27□□□□□ -0.45
CTSF-208ENST00000530565 BRWD3Q6RI45 1802 aa12.27□□□□□ -0.45
CTSF-208ENST00000530565 LRPPRCP42704 1394 aaKnown RBP12.27□□□□□ -0.45
CTSF-208ENST00000530565 YTHDC2Q9H6S0 1430 aaKnown RBP12.27□□□□□ -0.45
CTSF-208ENST00000530565 NBPF8Q3BBV2 869 aa12.26□□□□□ -0.45
CTSF-208ENST00000530565 ZRANB1Q9UGI0 708 aa12.26□□□□□ -0.45
CTSF-208ENST00000530565 NBPF1Q3BBV0 1214 aa12.25□□□□□ -0.45
CTSF-208ENST00000530565 STK26Q9P289 416 aa12.25□□□□□ -0.45
CTSF-208ENST00000530565 NPHP3Q7Z494 1330 aa12.25□□□□□ -0.45
CTSF-208ENST00000530565 ABCC11Q96J66 1382 aa12.25□□□□□ -0.45
CTSF-208ENST00000530565 TECPR2O15040 1411 aa12.25□□□□□ -0.45
CTSF-208ENST00000530565 SLIT2O94813 1529 aa12.25□□□□□ -0.45
CTSF-208ENST00000530565 FMN2Q9NZ56 1722 aa12.25□□□□□ -0.45
CTSF-208ENST00000530565 RALGAPBQ86X10 1494 aa12.24□□□□□ -0.45
CTSF-208ENST00000530565 CCDC125Q86Z20 511 aa12.24□□□□□ -0.45
CTSF-208ENST00000530565 GJD4Q96KN9 370 aaPredicted RBP12.24□□□□□ -0.45
CTSF-208ENST00000530565 USP32Q8NFA0 1604 aa12.23□□□□□ -0.45
CTSF-208ENST00000530565 XPCQ01831 940 aaPredicted RBP12.23□□□□□ -0.45
CTSF-208ENST00000530565 ESCO1Q5FWF5 840 aa12.23□□□□□ -0.45
CTSF-208ENST00000530565 DLC1Q96QB1 1528 aa12.22□□□□□ -0.45
CTSF-208ENST00000530565 BLMP54132 1417 aaPredicted RBP12.22□□□□□ -0.45
CTSF-208ENST00000530565 FOXO3O43524 673 aa12.22□□□□□ -0.45
CTSF-208ENST00000530565 ABCA3Q99758 1704 aa12.22□□□□□ -0.45
CTSF-208ENST00000530565 KIF1AQ12756 1690 aa12.22□□□□□ -0.45
CTSF-208ENST00000530565 ROCK2O75116 1388 aaKnown RBP12.21□□□□□ -0.45
CTSF-208ENST00000530565 SIRT1Q96EB6 747 aa12.21□□□□□ -0.45
CTSF-208ENST00000530565 TRAK1Q9UPV9 953 aa12.21□□□□□ -0.45
CTSF-208ENST00000530565 PLCH1Q4KWH8 1693 aa12.21□□□□□ -0.45
CTSF-208ENST00000530565 LRP5O75197 1615 aa12.21□□□□□ -0.46
CTSF-208ENST00000530565 ARHGEF28Q8N1W1 1705 aaKnown RBP12.2□□□□□ -0.46
CTSF-208ENST00000530565 GPRASP1Q5JY77 1395 aa12.2□□□□□ -0.46
CTSF-208ENST00000530565 PLEKHH1Q9ULM0 1364 aa12.2□□□□□ -0.46
CTSF-208ENST00000530565 UNC5CLQ8IV45 518 aa12.2□□□□□ -0.46
CTSF-208ENST00000530565 RGPD8O14715 1765 aaPredicted RBP12.2□□□□□ -0.46
CTSF-208ENST00000530565 SPATA31A3Q5VYP0 1347 aa12.19□□□□□ -0.46
CTSF-208ENST00000530565 WAPLQ7Z5K2 1190 aa12.19□□□□□ -0.46
CTSF-208ENST00000530565 NWD2Q9ULI1 1742 aa12.19□□□□□ -0.46
CTSF-208ENST00000530565 NUTM2FA1L443 756 aa12.18□□□□□ -0.46
CTSF-208ENST00000530565 DEFB132Q7Z7B7 95 aa12.18□□□□□ -0.46
CTSF-208ENST00000530565 PRAM1Q96QH2 718 aa12.18□□□□□ -0.46
CTSF-208ENST00000530565 CARD11Q9BXL7 1154 aa12.17□□□□□ -0.46
CTSF-208ENST00000530565 POGKQ9P215 609 aa12.17□□□□□ -0.46
CTSF-208ENST00000530565 NRAPQ86VF7 1730 aa12.17□□□□□ -0.46
CTSF-208ENST00000530565 TNS3Q68CZ2 1445 aa12.15□□□□□ -0.46
CTSF-208ENST00000530565 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
CTSF-208ENST00000530565 SAFB2Q14151 953 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTSF-208ENST00000530565 VPS72Q15906 364 aa12.14□□□□□ -0.47
CTSF-208ENST00000530565 KRT28Q7Z3Y7 464 aa12.14□□□□□ -0.47
CTSF-208ENST00000530565 SEPT12Q8IYM1 358 aa12.14□□□□□ -0.47
CTSF-208ENST00000530565 EIF3AQ14152 1382 aaKnown RBP12.14□□□□□ -0.47
CTSF-208ENST00000530565 ADGRB2O60241 1585 aa12.13□□□□□ -0.47
CTSF-208ENST00000530565 CENPJQ9HC77 1338 aaPredicted RBP12.13□□□□□ -0.47
CTSF-208ENST00000530565 QRICH2Q9H0J4 1663 aa12.13□□□□□ -0.47
CTSF-208ENST00000530565 MINK1Q8N4C8 1332 aaPredicted RBP12.12□□□□□ -0.47
CTSF-208ENST00000530565 TRPM3Q9HCF6 1732 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms