RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 FBXO31Q5XUX0 539 aaPredicted RBP11.95□□□□□ -0.5
VPS26B-205ENST00000530402 PCDHB3Q9Y5E6 796 aa11.95□□□□□ -0.5
VPS26B-205ENST00000530402 MORN1Q5T089 497 aa11.94□□□□□ -0.5
VPS26B-205ENST00000530402 TSC1Q92574 1164 aa11.94□□□□□ -0.5
VPS26B-205ENST00000530402 AP1G2O75843 785 aa11.93□□□□□ -0.5
VPS26B-205ENST00000530402 SLC27A5Q9Y2P5 690 aa11.93□□□□□ -0.5
VPS26B-205ENST00000530402 PTPN5P54829 565 aa11.92□□□□□ -0.5
VPS26B-205ENST00000530402 Q3C1V9 767 aa11.92□□□□□ -0.5
VPS26B-205ENST00000530402 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
VPS26B-205ENST00000530402 BANK1Q8NDB2 785 aa11.91□□□□□ -0.5
VPS26B-205ENST00000530402 SYMPKQ92797 1274 aaKnown RBP11.91□□□□□ -0.5
VPS26B-205ENST00000530402 UBTFP17480 764 aaKnown RBP11.9□□□□□ -0.5
VPS26B-205ENST00000530402 MCM6Q14566 821 aa11.9□□□□□ -0.5
VPS26B-205ENST00000530402 NR1I2O75469 434 aa11.89□□□□□ -0.51
VPS26B-205ENST00000530402 ZMYND15Q9H091 742 aa11.89□□□□□ -0.51
VPS26B-205ENST00000530402 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
VPS26B-205ENST00000530402 BLOC1S3Q6QNY0 202 aa11.88□□□□□ -0.51
VPS26B-205ENST00000530402 HELBQ8NG08 1087 aaPredicted RBP11.88□□□□□ -0.51
VPS26B-205ENST00000530402 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
VPS26B-205ENST00000530402 SCUBE3Q8IX30 993 aa11.87□□□□□ -0.51
VPS26B-205ENST00000530402 COPS2P61201 443 aa11.86□□□□□ -0.51
VPS26B-205ENST00000530402 SNRKQ9NRH2 765 aa11.86□□□□□ -0.51
VPS26B-205ENST00000530402 RETREG3Q86VR2 466 aa11.85□□□□□ -0.51
VPS26B-205ENST00000530402 PRR7Q8TB68 274 aa11.85□□□□□ -0.51
VPS26B-205ENST00000530402 CFAP99D6REC4 459 aa11.84□□□□□ -0.51
VPS26B-205ENST00000530402 RAD21O60216 631 aa11.84□□□□□ -0.51
VPS26B-205ENST00000530402 FMNL1O95466 1100 aaPredicted RBP11.84□□□□□ -0.51
VPS26B-205ENST00000530402 USP17L8P0C7I0 530 aa11.84□□□□□ -0.51
VPS26B-205ENST00000530402 CTDSPL2Q05D32 466 aa11.83□□□□□ -0.52
VPS26B-205ENST00000530402 RNF19BQ6ZMZ0 732 aa11.83□□□□□ -0.52
VPS26B-205ENST00000530402 APBB1O00213 710 aa11.82□□□□□ -0.52
VPS26B-205ENST00000530402 USB1Q9BQ65 265 aaKnown RBP11.82□□□□□ -0.52
VPS26B-205ENST00000530402 PCDH10Q9P2E7 1040 aa11.82□□□□□ -0.52
VPS26B-205ENST00000530402 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
VPS26B-205ENST00000530402 BRICD5Q6PL45 260 aa11.81□□□□□ -0.52
VPS26B-205ENST00000530402 CLUAP1Q96AJ1 413 aa11.81□□□□□ -0.52
VPS26B-205ENST00000530402 PRM3Q9NNZ6 103 aa11.8□□□□□ -0.52
VPS26B-205ENST00000530402 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
VPS26B-205ENST00000530402 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
VPS26B-205ENST00000530402 SPSB2Q99619 263 aa11.78□□□□□ -0.52
VPS26B-205ENST00000530402 MTRQ99707 1265 aa11.78□□□□□ -0.52
VPS26B-205ENST00000530402 THAP11Q96EK4 314 aa11.77□□□□□ -0.53
VPS26B-205ENST00000530402 LRRN4Q8WUT4 740 aa11.76□□□□□ -0.53
VPS26B-205ENST00000530402 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
VPS26B-205ENST00000530402 POM121Q96HA1 1249 aa11.76□□□□□ -0.53
VPS26B-205ENST00000530402 ZPR1O75312 459 aa11.75□□□□□ -0.53
VPS26B-205ENST00000530402 DESI1Q6ICB0 168 aa11.75□□□□□ -0.53
VPS26B-205ENST00000530402 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
VPS26B-205ENST00000530402 A6NJR5 290 aa11.74□□□□□ -0.53
VPS26B-205ENST00000530402 SPNS2Q8IVW8 549 aa11.74□□□□□ -0.53
VPS26B-205ENST00000530402 HCSTQ9UBK5 93 aa11.74□□□□□ -0.53
VPS26B-205ENST00000530402 COG6Q9Y2V7 657 aa11.74□□□□□ -0.53
VPS26B-205ENST00000530402 GDPD2Q9HCC8 539 aa11.73□□□□□ -0.53
VPS26B-205ENST00000530402 SOCS7O14512 581 aa11.72□□□□□ -0.53
VPS26B-205ENST00000530402 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
VPS26B-205ENST00000530402 TLL1O43897 1013 aa11.72□□□□□ -0.53
VPS26B-205ENST00000530402 JUNDP17535 347 aa11.72□□□□□ -0.53
VPS26B-205ENST00000530402 PROSER2Q86WR7 435 aaPredicted RBP11.72□□□□□ -0.53
VPS26B-205ENST00000530402 HMX1Q9NP08 348 aaPredicted RBP11.72□□□□□ -0.53
VPS26B-205ENST00000530402 ABL2P42684 1182 aa11.71□□□□□ -0.53
VPS26B-205ENST00000530402 TJAP1Q5JTD0 557 aa11.71□□□□□ -0.53
VPS26B-205ENST00000530402 WWC1Q8IX03 1113 aa11.71□□□□□ -0.53
VPS26B-205ENST00000530402 ZNF516Q92618 1163 aa11.71□□□□□ -0.53
VPS26B-205ENST00000530402 ADH1BP00325 375 aa11.7□□□□□ -0.54
VPS26B-205ENST00000530402 MSS51Q4VC12 460 aa11.7□□□□□ -0.54
VPS26B-205ENST00000530402 LYPD8Q6UX82 237 aa11.7□□□□□ -0.54
VPS26B-205ENST00000530402 TBC1D2BQ9UPU7 963 aa11.7□□□□□ -0.54
VPS26B-205ENST00000530402 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
VPS26B-205ENST00000530402 FAM160A2Q8N612 972 aaPredicted RBP11.69□□□□□ -0.54
VPS26B-205ENST00000530402 GJD4Q96KN9 370 aaPredicted RBP11.69□□□□□ -0.54
VPS26B-205ENST00000530402 TRAK2O60296 914 aa11.68□□□□□ -0.54
VPS26B-205ENST00000530402 NR6A1Q15406 480 aa11.68□□□□□ -0.54
VPS26B-205ENST00000530402 CTHP32929 405 aa11.67□□□□□ -0.54
VPS26B-205ENST00000530402 PRDM9Q9NQV7 894 aa11.67□□□□□ -0.54
VPS26B-205ENST00000530402 PTPRNQ16849 979 aa11.66□□□□□ -0.54
VPS26B-205ENST00000530402 EPS8L1Q8TE68 723 aa11.66□□□□□ -0.54
VPS26B-205ENST00000530402 TRIM34Q9BYJ4 488 aa11.66□□□□□ -0.54
VPS26B-205ENST00000530402 SLC6A16Q9GZN6 736 aa11.66□□□□□ -0.54
VPS26B-205ENST00000530402 PNMA1Q8ND90 353 aa11.65□□□□□ -0.54
VPS26B-205ENST00000530402 ZNF330Q9Y3S2 320 aaPredicted RBP11.65□□□□□ -0.54
VPS26B-205ENST00000530402 DXOO77932 396 aaKnown RBP11.64□□□□□ -0.55
VPS26B-205ENST00000530402 NUDT12Q9BQG2 462 aa11.64□□□□□ -0.55
VPS26B-205ENST00000530402 ARID3CA6NKF2 412 aa11.63□□□□□ -0.55
VPS26B-205ENST00000530402 CCNYL3P0C7X3 344 aa11.63□□□□□ -0.55
VPS26B-205ENST00000530402 MMP16P51512 607 aa11.63□□□□□ -0.55
VPS26B-205ENST00000530402 KCNC4Q03721 635 aa11.63□□□□□ -0.55
VPS26B-205ENST00000530402 CCDC24Q8N4L8 307 aa11.63□□□□□ -0.55
VPS26B-205ENST00000530402 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
VPS26B-205ENST00000530402 MAP10Q9P2G4 905 aa11.62□□□□□ -0.55
VPS26B-205ENST00000530402 ZNF777Q9ULD5 760 aaPredicted RBP11.62□□□□□ -0.55
VPS26B-205ENST00000530402 FNBP4Q8N3X1 1017 aaPredicted RBP11.61□□□□□ -0.55
VPS26B-205ENST00000530402 S1PR4O95977 384 aa11.59□□□□□ -0.55
VPS26B-205ENST00000530402 F12P00748 615 aaPredicted RBP11.59□□□□□ -0.55
VPS26B-205ENST00000530402 EVA1BQ9NVM1 165 aa11.59□□□□□ -0.55
VPS26B-205ENST00000530402 KCNH2Q12809 1159 aa11.58□□□□□ -0.56
VPS26B-205ENST00000530402 WASHC4Q2M389 1173 aa11.57□□□□□ -0.56
VPS26B-205ENST00000530402 MMRN1Q13201 1228 aa11.56□□□□□ -0.56
VPS26B-205ENST00000530402 FKBPLQ9UIM3 349 aa11.56□□□□□ -0.56
VPS26B-205ENST00000530402 ITGBL1O95965 494 aaPredicted RBP11.55□□□□□ -0.56
VPS26B-205ENST00000530402 IRF5Q13568 498 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms