RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 MINK1Q8N4C8 1332 aaPredicted RBP14.92□□□□□ -0.02
SOX6-213ENST00000530378 TESK2Q96S53 571 aa14.92□□□□□ -0.02
SOX6-213ENST00000530378 ABCC11Q96J66 1382 aa14.91□□□□□ -0.02
SOX6-213ENST00000530378 TECPR2O15040 1411 aa14.91□□□□□ -0.02
SOX6-213ENST00000530378 NWD1Q149M9 1564 aa14.9□□□□□ -0.02
SOX6-213ENST00000530378 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.89□□□□□ -0.03
SOX6-213ENST00000530378 PIK3R4Q99570 1358 aa14.89□□□□□ -0.03
SOX6-213ENST00000530378 WASHC2AQ641Q2 1341 aa14.88□□□□□ -0.03
SOX6-213ENST00000530378 PTCH1Q13635 1447 aa14.88□□□□□ -0.03
SOX6-213ENST00000530378 TULP4Q9NRJ4 1543 aa14.88□□□□□ -0.03
SOX6-213ENST00000530378 KIF7Q2M1P5 1343 aa14.88□□□□□ -0.03
SOX6-213ENST00000530378 NALCNQ8IZF0 1738 aa14.87□□□□□ -0.03
SOX6-213ENST00000530378 ZNF335Q9H4Z2 1342 aaPredicted RBP14.86□□□□□ -0.03
SOX6-213ENST00000530378 CCDC7Q96M83 1385 aa14.86□□□□□ -0.03
SOX6-213ENST00000530378 FAM135BQ49AJ0 1406 aa14.86□□□□□ -0.03
SOX6-213ENST00000530378 TMF1P82094 1093 aa14.85□□□□□ -0.03
SOX6-213ENST00000530378 NKTRP30414 1462 aaKnown RBP14.83□□□□□ -0.04
SOX6-213ENST00000530378 SBNO2Q9Y2G9 1366 aa14.83□□□□□ -0.04
SOX6-213ENST00000530378 MYOM1P52179 1685 aa14.83□□□□□ -0.04
SOX6-213ENST00000530378 DDX10Q13206 875 aaKnown RBP14.82□□□□□ -0.04
SOX6-213ENST00000530378 C14orf37Q86TY3 774 aa14.82□□□□□ -0.04
SOX6-213ENST00000530378 CABP2Q9NPB3 220 aa14.82□□□□□ -0.04
SOX6-213ENST00000530378 XIRP1Q702N8 1843 aaKnown RBP14.82□□□□□ -0.04
SOX6-213ENST00000530378 NUTM2FA1L443 756 aa14.82□□□□□ -0.04
SOX6-213ENST00000530378 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
SOX6-213ENST00000530378 ADGRB2O60241 1585 aa14.81□□□□□ -0.04
SOX6-213ENST00000530378 SRPK2P78362 688 aaKnown RBP14.81□□□□□ -0.04
SOX6-213ENST00000530378 DMRT2Q9Y5R5 561 aa14.8□□□□□ -0.04
SOX6-213ENST00000530378 EVC2Q86UK5 1308 aa14.8□□□□□ -0.04
SOX6-213ENST00000530378 RGPD8O14715 1765 aaPredicted RBP14.8□□□□□ -0.04
SOX6-213ENST00000530378 SIRT1Q96EB6 747 aa14.8□□□□□ -0.04
SOX6-213ENST00000530378 TMEM94Q12767 1356 aa14.8□□□□□ -0.04
SOX6-213ENST00000530378 CDK19Q9BWU1 502 aa14.79□□□□□ -0.04
SOX6-213ENST00000530378 ADGRL3Q9HAR2 1447 aa14.78□□□□□ -0.04
SOX6-213ENST00000530378 FMN2Q9NZ56 1722 aa14.77□□□□□ -0.04
SOX6-213ENST00000530378 WASLO00401 505 aaPredicted RBP14.77□□□□□ -0.05
SOX6-213ENST00000530378 TMC1Q8TDI8 760 aa14.77□□□□□ -0.05
SOX6-213ENST00000530378 LRRC7Q96NW7 1537 aa14.77□□□□□ -0.05
SOX6-213ENST00000530378 USP32Q8NFA0 1604 aa14.76□□□□□ -0.05
SOX6-213ENST00000530378 CDC42BPGQ6DT37 1551 aa14.76□□□□□ -0.05
SOX6-213ENST00000530378 CNGB1Q14028 1251 aaPredicted RBP14.75□□□□□ -0.05
SOX6-213ENST00000530378 CDCA8Q53HL2 280 aa14.75□□□□□ -0.05
SOX6-213ENST00000530378 ATP7BP35670 1465 aa14.75□□□□□ -0.05
SOX6-213ENST00000530378 PRR36Q9H6K5 1346 aa14.74□□□□□ -0.05
SOX6-213ENST00000530378 TOPAZ1Q8N9V7 1692 aa14.74□□□□□ -0.05
SOX6-213ENST00000530378 DIEXFQ68CQ4 756 aaKnown RBP14.73□□□□□ -0.05
SOX6-213ENST00000530378 LTBP4Q8N2S1 1624 aa14.72□□□□□ -0.05
SOX6-213ENST00000530378 ITSN1Q15811 1721 aa14.72□□□□□ -0.05
SOX6-213ENST00000530378 NUDT16Q96DE0 195 aaKnown RBP14.72□□□□□ -0.05
SOX6-213ENST00000530378 SLC12A5Q9H2X9 1139 aa14.72□□□□□ -0.05
SOX6-213ENST00000530378 PPIP5K1Q6PFW1 1433 aa14.71□□□□□ -0.05
SOX6-213ENST00000530378 SLC24A1O60721 1099 aa14.71□□□□□ -0.05
SOX6-213ENST00000530378 ATAD2Q6PL18 1390 aa14.71□□□□□ -0.06
SOX6-213ENST00000530378 PANK3Q9H999 370 aa14.7□□□□□ -0.06
SOX6-213ENST00000530378 CABP1Q9NZU7 370 aa14.7□□□□□ -0.06
SOX6-213ENST00000530378 MSH6P52701 1360 aa14.69□□□□□ -0.06
SOX6-213ENST00000530378 PMFBP1Q8TBY8 1022 aa14.68□□□□□ -0.06
SOX6-213ENST00000530378 C19orf44Q9H6X5 657 aa14.68□□□□□ -0.06
SOX6-213ENST00000530378 ATF3P18847 181 aa14.67□□□□□ -0.06
SOX6-213ENST00000530378 AKAP12Q02952 1782 aa14.67□□□□□ -0.06
SOX6-213ENST00000530378 A0A1W2PP64 1363 aa14.67□□□□□ -0.06
SOX6-213ENST00000530378 CD163L1Q9NR16 1453 aa14.66□□□□□ -0.06
SOX6-213ENST00000530378 CCDC61Q9Y6R9 512 aa14.66□□□□□ -0.06
SOX6-213ENST00000530378 MST1RQ04912 1400 aa14.65□□□□□ -0.06
SOX6-213ENST00000530378 ANKARQ7Z5J8 1434 aa14.65□□□□□ -0.06
SOX6-213ENST00000530378 NSD3Q9BZ95 1437 aa14.65□□□□□ -0.06
SOX6-213ENST00000530378 NCOA3Q9Y6Q9 1424 aa14.65□□□□□ -0.06
SOX6-213ENST00000530378 IQSEC2Q5JU85 1478 aa14.64□□□□□ -0.07
SOX6-213ENST00000530378 MON2Q7Z3U7 1717 aa14.64□□□□□ -0.07
SOX6-213ENST00000530378 ESCO1Q5FWF5 840 aa14.64□□□□□ -0.07
SOX6-213ENST00000530378 DCCP43146 1447 aa14.64□□□□□ -0.07
SOX6-213ENST00000530378 C1orf167Q5SNV9 1468 aa14.64□□□□□ -0.07
SOX6-213ENST00000530378 PUS7Q96PZ0 661 aaKnown RBP14.64□□□□□ -0.07
SOX6-213ENST00000530378 ORAI2Q96SN7 254 aa14.64□□□□□ -0.07
SOX6-213ENST00000530378 CARD14Q9BXL6 1004 aa14.64□□□□□ -0.07
SOX6-213ENST00000530378 ANKRD36BQ8N2N9 1353 aa14.63□□□□□ -0.07
SOX6-213ENST00000530378 NINLQ9Y2I6 1382 aa14.63□□□□□ -0.07
SOX6-213ENST00000530378 ACEP12821 1306 aa14.62□□□□□ -0.07
SOX6-213ENST00000530378 CC2D1BQ5T0F9 858 aaKnown RBP14.62□□□□□ -0.07
SOX6-213ENST00000530378 HDGFL2Q7Z4V5 671 aaPredicted RBP14.62□□□□□ -0.07
SOX6-213ENST00000530378 CADPS2Q86UW7 1296 aa14.62□□□□□ -0.07
SOX6-213ENST00000530378 NGDNQ8NEJ9 315 aaKnown RBP14.62□□□□□ -0.07
SOX6-213ENST00000530378 TERF2IPQ9NYB0 399 aa14.62□□□□□ -0.07
SOX6-213ENST00000530378 KTN1Q86UP2 1357 aaKnown RBP14.61□□□□□ -0.07
SOX6-213ENST00000530378 XPCQ01831 940 aaPredicted RBP14.61□□□□□ -0.07
SOX6-213ENST00000530378 KIF20BQ96Q89 1820 aa14.61□□□□□ -0.07
SOX6-213ENST00000530378 PHF8Q9UPP1 1060 aa14.61□□□□□ -0.07
SOX6-213ENST00000530378 NRKQ7Z2Y5 1582 aa14.6□□□□□ -0.07
SOX6-213ENST00000530378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.6□□□□□ -0.07
SOX6-213ENST00000530378 KNSTRNQ9Y448 316 aa14.6□□□□□ -0.07
SOX6-213ENST00000530378 KIF1AQ12756 1690 aa14.6□□□□□ -0.07
SOX6-213ENST00000530378 DDX17Q92841 729 aaKnown RBP14.59□□□□□ -0.07
SOX6-213ENST00000530378 CPSF1Q10570 1443 aaKnown RBP14.59□□□□□ -0.07
SOX6-213ENST00000530378 PER1O15534 1290 aaPredicted RBP14.59□□□□□ -0.07
SOX6-213ENST00000530378 PLEKHG3A1L390 1219 aa14.58□□□□□ -0.08
SOX6-213ENST00000530378 FOXO3O43524 673 aa14.57□□□□□ -0.08
SOX6-213ENST00000530378 MIER1Q8N108 512 aa14.57□□□□□ -0.08
SOX6-213ENST00000530378 USP6P35125 1406 aa14.57□□□□□ -0.08
SOX6-213ENST00000530378 SLAIN2Q9P270 581 aa14.57□□□□□ -0.08
SOX6-213ENST00000530378 POLR3AO14802 1390 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms