RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 RRBP1Q9P2E9 1410 aaKnown RBP11.32□□□□□ -0.6
NUP98-217ENST00000530345 MYOM2P54296 1465 aa11.32□□□□□ -0.6
NUP98-217ENST00000530345 ATRNO75882 1429 aa11.31□□□□□ -0.6
NUP98-217ENST00000530345 NAIPQ13075 1403 aa11.31□□□□□ -0.6
NUP98-217ENST00000530345 FMN2Q9NZ56 1722 aa11.31□□□□□ -0.6
NUP98-217ENST00000530345 NWD2Q9ULI1 1742 aa11.31□□□□□ -0.6
NUP98-217ENST00000530345 NPHP3Q7Z494 1330 aa11.31□□□□□ -0.6
NUP98-217ENST00000530345 LRPPRCP42704 1394 aaKnown RBP11.3□□□□□ -0.6
NUP98-217ENST00000530345 TECPR2O15040 1411 aa11.3□□□□□ -0.6
NUP98-217ENST00000530345 FNBP4Q8N3X1 1017 aaPredicted RBP11.3□□□□□ -0.6
NUP98-217ENST00000530345 ROBO2Q9HCK4 1378 aa11.29□□□□□ -0.6
NUP98-217ENST00000530345 CCDC125Q86Z20 511 aa11.29□□□□□ -0.6
NUP98-217ENST00000530345 USP21Q9UK80 565 aa11.29□□□□□ -0.6
NUP98-217ENST00000530345 PXDNQ92626 1479 aa11.29□□□□□ -0.6
NUP98-217ENST00000530345 BRWD3Q6RI45 1802 aa11.28□□□□□ -0.6
NUP98-217ENST00000530345 ITGAEP38570 1179 aa11.28□□□□□ -0.6
NUP98-217ENST00000530345 USP32Q8NFA0 1604 aa11.27□□□□□ -0.6
NUP98-217ENST00000530345 RGPD8O14715 1765 aaPredicted RBP11.27□□□□□ -0.61
NUP98-217ENST00000530345 ABCA3Q99758 1704 aa11.26□□□□□ -0.61
NUP98-217ENST00000530345 ADAMTS2O95450 1211 aa11.26□□□□□ -0.61
NUP98-217ENST00000530345 ANKRD30BQ9BXX2 1392 aa11.26□□□□□ -0.61
NUP98-217ENST00000530345 CCDC144AA2RUR9 1427 aa11.26□□□□□ -0.61
NUP98-217ENST00000530345 PLCH1Q4KWH8 1693 aa11.25□□□□□ -0.61
NUP98-217ENST00000530345 DDX17Q92841 729 aaKnown RBP11.25□□□□□ -0.61
NUP98-217ENST00000530345 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
NUP98-217ENST00000530345 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
NUP98-217ENST00000530345 ACIN1Q9UKV3 1341 aaKnown RBP11.24□□□□□ -0.61
NUP98-217ENST00000530345 BCL9LQ86UU0 1499 aa11.24□□□□□ -0.61
NUP98-217ENST00000530345 ABCC11Q96J66 1382 aa11.23□□□□□ -0.61
NUP98-217ENST00000530345 LRP5O75197 1615 aa11.23□□□□□ -0.61
NUP98-217ENST00000530345 SLIT2O94813 1529 aa11.22□□□□□ -0.61
NUP98-217ENST00000530345 GLI3P10071 1580 aa11.22□□□□□ -0.61
NUP98-217ENST00000530345 SLC4A1APQ9BWU0 796 aaKnown RBP11.22□□□□□ -0.61
NUP98-217ENST00000530345 PIK3C2GO75747 1445 aa11.21□□□□□ -0.61
NUP98-217ENST00000530345 BLMP54132 1417 aaPredicted RBP11.21□□□□□ -0.61
NUP98-217ENST00000530345 SPATA31E1Q6ZUB1 1445 aa11.21□□□□□ -0.61
NUP98-217ENST00000530345 ESCO1Q5FWF5 840 aa11.21□□□□□ -0.61
NUP98-217ENST00000530345 GJD4Q96KN9 370 aaPredicted RBP11.2□□□□□ -0.62
NUP98-217ENST00000530345 RGPD1P0DJD0 1748 aa11.2□□□□□ -0.62
NUP98-217ENST00000530345 ADGRB2O60241 1585 aa11.2□□□□□ -0.62
NUP98-217ENST00000530345 RALGAPBQ86X10 1494 aa11.19□□□□□ -0.62
NUP98-217ENST00000530345 TNS3Q68CZ2 1445 aa11.18□□□□□ -0.62
NUP98-217ENST00000530345 ITSN1Q15811 1721 aa11.18□□□□□ -0.62
NUP98-217ENST00000530345 NRAPQ86VF7 1730 aa11.18□□□□□ -0.62
NUP98-217ENST00000530345 UNC5CLQ8IV45 518 aa11.18□□□□□ -0.62
NUP98-217ENST00000530345 SIRT1Q96EB6 747 aa11.18□□□□□ -0.62
NUP98-217ENST00000530345 YTHDC2Q9H6S0 1430 aaKnown RBP11.18□□□□□ -0.62
NUP98-217ENST00000530345 ARHGEF10O15013 1369 aa11.17□□□□□ -0.62
NUP98-217ENST00000530345 SPATA31A3Q5VYP0 1347 aa11.17□□□□□ -0.62
NUP98-217ENST00000530345 FOXO3O43524 673 aa11.17□□□□□ -0.62
NUP98-217ENST00000530345 DLC1Q96QB1 1528 aa11.17□□□□□ -0.62
NUP98-217ENST00000530345 COL14A1Q05707 1796 aaKnown RBP11.17□□□□□ -0.62
NUP98-217ENST00000530345 TRPM3Q9HCF6 1732 aaPredicted RBP11.17□□□□□ -0.62
NUP98-217ENST00000530345 SBNO1A3KN83 1393 aa11.16□□□□□ -0.62
NUP98-217ENST00000530345 NRXN1Q9ULB1 1477 aa11.16□□□□□ -0.62
NUP98-217ENST00000530345 ALS2Q96Q42 1657 aa11.16□□□□□ -0.62
NUP98-217ENST00000530345 ANKARQ7Z5J8 1434 aa11.16□□□□□ -0.62
NUP98-217ENST00000530345 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
NUP98-217ENST00000530345 PSME1Q06323 249 aa11.15□□□□□ -0.62
NUP98-217ENST00000530345 CRYBG1Q9Y4K1 1723 aa11.15□□□□□ -0.63
NUP98-217ENST00000530345 ADGRF5Q8IZF2 1346 aa11.14□□□□□ -0.63
NUP98-217ENST00000530345 SF3B2Q13435 895 aaKnown RBP11.14□□□□□ -0.63
NUP98-217ENST00000530345 VPS72Q15906 364 aa11.13□□□□□ -0.63
NUP98-217ENST00000530345 DHX57Q6P158 1386 aaKnown RBP11.13□□□□□ -0.63
NUP98-217ENST00000530345 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
NUP98-217ENST00000530345 TNS1Q9HBL0 1735 aaKnown RBP11.12□□□□□ -0.63
NUP98-217ENST00000530345 ONECUT3O60422 494 aaPredicted RBP11.11□□□□□ -0.63
NUP98-217ENST00000530345 XPCQ01831 940 aaPredicted RBP11.11□□□□□ -0.63
NUP98-217ENST00000530345 KRT28Q7Z3Y7 464 aa11.11□□□□□ -0.63
NUP98-217ENST00000530345 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
NUP98-217ENST00000530345 STK26Q9P289 416 aa11.11□□□□□ -0.63
NUP98-217ENST00000530345 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
NUP98-217ENST00000530345 PLEKHH1Q9ULM0 1364 aa11.11□□□□□ -0.63
NUP98-217ENST00000530345 C14orf93Q9H972 538 aaKnown RBP11.1□□□□□ -0.63
NUP98-217ENST00000530345 THSD7AQ9UPZ6 1657 aa11.1□□□□□ -0.63
NUP98-217ENST00000530345 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
NUP98-217ENST00000530345 RGL3Q3MIN7 710 aa11.09□□□□□ -0.63
NUP98-217ENST00000530345 PPARGC1BQ86YN6 1023 aaKnown RBP11.09□□□□□ -0.63
NUP98-217ENST00000530345 SEPT12Q8IYM1 358 aa11.09□□□□□ -0.63
NUP98-217ENST00000530345 DISP2A7MBM2 1401 aa11.09□□□□□ -0.63
NUP98-217ENST00000530345 KRT27Q7Z3Y8 459 aa11.08□□□□□ -0.64
NUP98-217ENST00000530345 MPHOSPH9Q99550 1183 aa11.08□□□□□ -0.64
NUP98-217ENST00000530345 ARHGEF28Q8N1W1 1705 aaKnown RBP11.08□□□□□ -0.64
NUP98-217ENST00000530345 ADGRB1O14514 1584 aa11.07□□□□□ -0.64
NUP98-217ENST00000530345 GPRASP1Q5JY77 1395 aa11.07□□□□□ -0.64
NUP98-217ENST00000530345 PHRF1Q9P1Y6 1649 aaKnown RBP11.07□□□□□ -0.64
NUP98-217ENST00000530345 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
NUP98-217ENST00000530345 BAG6P46379 1132 aa11.07□□□□□ -0.64
NUP98-217ENST00000530345 TMEM132EQ6IEE7 984 aa11.07□□□□□ -0.64
NUP98-217ENST00000530345 STAC3Q96MF2 364 aa11.06□□□□□ -0.64
NUP98-217ENST00000530345 KIAA1210Q9ULL0 1709 aa11.06□□□□□ -0.64
NUP98-217ENST00000530345 ATP7BP35670 1465 aa11.06□□□□□ -0.64
NUP98-217ENST00000530345 TOPAZ1Q8N9V7 1692 aa11.05□□□□□ -0.64
NUP98-217ENST00000530345 CCDC9Q9Y3X0 531 aaKnown RBP11.05□□□□□ -0.64
NUP98-217ENST00000530345 RREB1Q92766 1687 aa11.04□□□□□ -0.64
NUP98-217ENST00000530345 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
NUP98-217ENST00000530345 RGPD3A6NKT7 1758 aaPredicted RBP11.04□□□□□ -0.64
NUP98-217ENST00000530345 RGPD4Q7Z3J3 1758 aa11.04□□□□□ -0.64
NUP98-217ENST00000530345 PRAM1Q96QH2 718 aa11.04□□□□□ -0.64
NUP98-217ENST00000530345 DEFB132Q7Z7B7 95 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms