RNA–Protein interactions for RNA: ENST00000530311.6

TRIM49D1-202, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-202ENST00000530311 NEURL4Q96JN8 1562 aa11.96□□□□□ -0.5
TRIM49D1-202ENST00000530311 MTHFSP49914 203 aa11.95□□□□□ -0.5
TRIM49D1-202ENST00000530311 USP35Q9P2H5 1018 aa11.95□□□□□ -0.5
TRIM49D1-202ENST00000530311 BCL2L13Q9BXK5 485 aa11.95□□□□□ -0.5
TRIM49D1-202ENST00000530311 IFT172Q9UG01 1749 aa11.95□□□□□ -0.5
TRIM49D1-202ENST00000530311 NPATQ14207 1427 aa11.94□□□□□ -0.5
TRIM49D1-202ENST00000530311 SBNO2Q9Y2G9 1366 aa11.94□□□□□ -0.5
TRIM49D1-202ENST00000530311 PDE3AQ14432 1141 aa11.94□□□□□ -0.5
TRIM49D1-202ENST00000530311 NFKBIBQ15653 356 aa11.94□□□□□ -0.5
TRIM49D1-202ENST00000530311 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
TRIM49D1-202ENST00000530311 SEC24BO95487 1268 aa11.94□□□□□ -0.5
TRIM49D1-202ENST00000530311 RARSP54136 660 aaKnown RBP11.94□□□□□ -0.5
TRIM49D1-202ENST00000530311 SAFB2Q14151 953 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRIM49D1-202ENST00000530311 CLUAP1Q96AJ1 413 aa11.94□□□□□ -0.5
TRIM49D1-202ENST00000530311 DAXXQ9UER7 740 aaPredicted RBP11.94□□□□□ -0.5
TRIM49D1-202ENST00000530311 RLBP1P12271 317 aa11.93□□□□□ -0.5
TRIM49D1-202ENST00000530311 CGNL1Q0VF96 1302 aa11.92□□□□□ -0.5
TRIM49D1-202ENST00000530311 ADGRB3O60242 1522 aa11.92□□□□□ -0.5
TRIM49D1-202ENST00000530311 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
TRIM49D1-202ENST00000530311 IL27Q8NEV9 243 aa11.92□□□□□ -0.5
TRIM49D1-202ENST00000530311 FRMPD1Q5SYB0 1578 aa11.92□□□□□ -0.5
TRIM49D1-202ENST00000530311 ZNF518AQ6AHZ1 1483 aa11.92□□□□□ -0.5
TRIM49D1-202ENST00000530311 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
TRIM49D1-202ENST00000530311 MYO3AQ8NEV4 1616 aa11.92□□□□□ -0.5
TRIM49D1-202ENST00000530311 USP19O94966 1318 aa11.91□□□□□ -0.5
TRIM49D1-202ENST00000530311 PCDHB15Q9Y5E8 787 aa11.91□□□□□ -0.5
TRIM49D1-202ENST00000530311 LMTK2Q8IWU2 1503 aa11.91□□□□□ -0.5
TRIM49D1-202ENST00000530311 ADGRB1O14514 1584 aa11.91□□□□□ -0.5
TRIM49D1-202ENST00000530311 SHPRHQ149N8 1683 aa11.91□□□□□ -0.5
TRIM49D1-202ENST00000530311 RAPGEF3O95398 923 aa11.89□□□□□ -0.51
TRIM49D1-202ENST00000530311 U2AF1L5P0DN76 240 aaPredicted RBP11.89□□□□□ -0.51
TRIM49D1-202ENST00000530311 U2AF1Q01081 240 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRIM49D1-202ENST00000530311 SETBP1Q9Y6X0 1596 aa11.89□□□□□ -0.51
TRIM49D1-202ENST00000530311 WDR63Q8IWG1 891 aa11.89□□□□□ -0.51
TRIM49D1-202ENST00000530311 STK26Q9P289 416 aa11.89□□□□□ -0.51
TRIM49D1-202ENST00000530311 QRICH2Q9H0J4 1663 aa11.89□□□□□ -0.51
TRIM49D1-202ENST00000530311 POGZQ7Z3K3 1410 aa11.89□□□□□ -0.51
TRIM49D1-202ENST00000530311 NPM1P06748 294 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRIM49D1-202ENST00000530311 CD109Q6YHK3 1445 aa11.88□□□□□ -0.51
TRIM49D1-202ENST00000530311 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
TRIM49D1-202ENST00000530311 IQSEC2Q5JU85 1478 aa11.88□□□□□ -0.51
TRIM49D1-202ENST00000530311 FRAT2O75474 233 aaPredicted RBP11.88□□□□□ -0.51
TRIM49D1-202ENST00000530311 CFAP74Q9C0B2 1584 aa11.87□□□□□ -0.51
TRIM49D1-202ENST00000530311 CFAP53Q96M91 514 aa11.87□□□□□ -0.51
TRIM49D1-202ENST00000530311 RTN4Q9NQC3 1192 aaKnown RBP11.87□□□□□ -0.51
TRIM49D1-202ENST00000530311 PPLO60437 1756 aa11.87□□□□□ -0.51
TRIM49D1-202ENST00000530311 RPGRIP1LQ68CZ1 1315 aa11.87□□□□□ -0.51
TRIM49D1-202ENST00000530311 EVC2Q86UK5 1308 aa11.87□□□□□ -0.51
TRIM49D1-202ENST00000530311 TSR2Q969E8 191 aaKnown RBP11.86□□□□□ -0.51
TRIM49D1-202ENST00000530311 ZC3H13Q5T200 1668 aaKnown RBP11.86□□□□□ -0.51
TRIM49D1-202ENST00000530311 GSE1Q14687 1217 aa11.86□□□□□ -0.51
TRIM49D1-202ENST00000530311 GGNBP2Q9H3C7 697 aa11.86□□□□□ -0.51
TRIM49D1-202ENST00000530311 IDI1Q13907 227 aa11.85□□□□□ -0.51
TRIM49D1-202ENST00000530311 PDZRN3Q9UPQ7 1066 aa11.85□□□□□ -0.51
TRIM49D1-202ENST00000530311 SIGLEC1Q9BZZ2 1709 aa11.85□□□□□ -0.51
TRIM49D1-202ENST00000530311 NINLQ9Y2I6 1382 aa11.85□□□□□ -0.51
TRIM49D1-202ENST00000530311 VGFO15240 615 aaPredicted RBP11.85□□□□□ -0.51
TRIM49D1-202ENST00000530311 CCDC27Q2M243 656 aa11.85□□□□□ -0.51
TRIM49D1-202ENST00000530311 TULP4Q9NRJ4 1543 aa11.85□□□□□ -0.51
TRIM49D1-202ENST00000530311 U2SURPO15042 1029 aaKnown RBP11.84□□□□□ -0.51
TRIM49D1-202ENST00000530311 ABCC3O15438 1527 aa11.84□□□□□ -0.51
TRIM49D1-202ENST00000530311 MAPK8IP3Q9UPT6 1336 aa11.84□□□□□ -0.51
TRIM49D1-202ENST00000530311 ANKRD36BQ8N2N9 1353 aa11.84□□□□□ -0.51
TRIM49D1-202ENST00000530311 MLH3Q9UHC1 1453 aa11.84□□□□□ -0.51
TRIM49D1-202ENST00000530311 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
TRIM49D1-202ENST00000530311 PMFBP1Q8TBY8 1022 aa11.84□□□□□ -0.51
TRIM49D1-202ENST00000530311 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
TRIM49D1-202ENST00000530311 MYH16Q9H6N6 1097 aa11.83□□□□□ -0.52
TRIM49D1-202ENST00000530311 GLI2P10070 1586 aa11.83□□□□□ -0.52
TRIM49D1-202ENST00000530311 BRPF3Q9ULD4 1205 aa11.82□□□□□ -0.52
TRIM49D1-202ENST00000530311 CAMSAP1Q5T5Y3 1602 aa11.82□□□□□ -0.52
TRIM49D1-202ENST00000530311 EXOSC9Q06265 439 aaKnown RBP11.82□□□□□ -0.52
TRIM49D1-202ENST00000530311 PLEKHF1Q96S99 279 aa11.82□□□□□ -0.52
TRIM49D1-202ENST00000530311 MINK1Q8N4C8 1332 aaPredicted RBP11.82□□□□□ -0.52
TRIM49D1-202ENST00000530311 A0A1W2PP64 1363 aa11.82□□□□□ -0.52
TRIM49D1-202ENST00000530311 MVPQ14764 893 aaKnown RBP11.81□□□□□ -0.52
TRIM49D1-202ENST00000530311 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
TRIM49D1-202ENST00000530311 TMPOP42166 694 aaKnown RBP11.81□□□□□ -0.52
TRIM49D1-202ENST00000530311 PUS7Q96PZ0 661 aaKnown RBP11.81□□□□□ -0.52
TRIM49D1-202ENST00000530311 DIP2CQ9Y2E4 1556 aa11.8□□□□□ -0.52
TRIM49D1-202ENST00000530311 NEXMIFQ5QGS0 1516 aa11.8□□□□□ -0.52
TRIM49D1-202ENST00000530311 FYB1O15117 783 aa11.8□□□□□ -0.52
TRIM49D1-202ENST00000530311 FBLN1P23142 703 aa11.8□□□□□ -0.52
TRIM49D1-202ENST00000530311 ZKSCAN2Q63HK3 967 aa11.8□□□□□ -0.52
TRIM49D1-202ENST00000530311 DZIP1LQ8IYY4 767 aaKnown RBP11.8□□□□□ -0.52
TRIM49D1-202ENST00000530311 SLKQ9H2G2 1235 aaPredicted RBP11.8□□□□□ -0.52
TRIM49D1-202ENST00000530311 RWDD1Q9H446 243 aaPredicted RBP11.8□□□□□ -0.52
TRIM49D1-202ENST00000530311 RICTORQ6R327 1708 aa11.8□□□□□ -0.52
TRIM49D1-202ENST00000530311 NLRP1Q9C000 1473 aa11.8□□□□□ -0.52
TRIM49D1-202ENST00000530311 FTSJ3Q8IY81 847 aaKnown RBP11.79□□□□□ -0.52
TRIM49D1-202ENST00000530311 SSH1Q8WYL5 1049 aa11.79□□□□□ -0.52
TRIM49D1-202ENST00000530311 PRAM1Q96QH2 718 aa11.79□□□□□ -0.52
TRIM49D1-202ENST00000530311 SMC4Q9NTJ3 1288 aa11.79□□□□□ -0.52
TRIM49D1-202ENST00000530311 USP32Q8NFA0 1604 aa11.79□□□□□ -0.52
TRIM49D1-202ENST00000530311 ARHGEF28Q8N1W1 1705 aaKnown RBP11.79□□□□□ -0.52
TRIM49D1-202ENST00000530311 NSD2O96028 1365 aa11.78□□□□□ -0.52
TRIM49D1-202ENST00000530311 TRIM27P14373 513 aa11.78□□□□□ -0.52
TRIM49D1-202ENST00000530311 PIK3C2BO00750 1634 aa11.78□□□□□ -0.52
TRIM49D1-202ENST00000530311 AAMPQ13685 434 aa11.78□□□□□ -0.52
TRIM49D1-202ENST00000530311 FBXO31Q5XUX0 539 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms