RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 WDR62O43379 1518 aa15.42■□□□□ 0.06
SCN3B-206ENST00000530277 DISP1Q96F81 1524 aa15.42■□□□□ 0.06
SCN3B-206ENST00000530277 RAPGEF6Q8TEU7 1601 aa15.42■□□□□ 0.06
SCN3B-206ENST00000530277 GLIPR1L2Q4G1C9 344 aa15.42■□□□□ 0.06
SCN3B-206ENST00000530277 GOLGA6L3A6NEY3 463 aa15.42■□□□□ 0.06
SCN3B-206ENST00000530277 CARD14Q9BXL6 1004 aa15.42■□□□□ 0.06
SCN3B-206ENST00000530277 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
SCN3B-206ENST00000530277 PLEKHH1Q9ULM0 1364 aa15.41■□□□□ 0.06
SCN3B-206ENST00000530277 DNTTIP2Q5QJE6 756 aaKnown RBP15.41■□□□□ 0.06
SCN3B-206ENST00000530277 KIF14Q15058 1648 aa15.41■□□□□ 0.06
SCN3B-206ENST00000530277 USP35Q9P2H5 1018 aa15.41■□□□□ 0.06
SCN3B-206ENST00000530277 TCOF1Q13428 1488 aaKnown RBP15.4■□□□□ 0.06
SCN3B-206ENST00000530277 SSH1Q8WYL5 1049 aa15.4■□□□□ 0.06
SCN3B-206ENST00000530277 RARSP54136 660 aaKnown RBP15.4■□□□□ 0.06
SCN3B-206ENST00000530277 TEX14Q8IWB6 1497 aa15.4■□□□□ 0.06
SCN3B-206ENST00000530277 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
SCN3B-206ENST00000530277 SYCP2Q9BX26 1530 aa15.39■□□□□ 0.05
SCN3B-206ENST00000530277 FGD1P98174 961 aa15.39■□□□□ 0.05
SCN3B-206ENST00000530277 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
SCN3B-206ENST00000530277 TMEM57Q8N5G2 664 aa15.39■□□□□ 0.05
SCN3B-206ENST00000530277 PDE3AQ14432 1141 aa15.39■□□□□ 0.05
SCN3B-206ENST00000530277 TMPOP42166 694 aaKnown RBP15.38■□□□□ 0.05
SCN3B-206ENST00000530277 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
SCN3B-206ENST00000530277 FKBP5Q13451 457 aaPredicted RBP15.38■□□□□ 0.05
SCN3B-206ENST00000530277 PRAG1Q86YV5 1406 aa15.38■□□□□ 0.05
SCN3B-206ENST00000530277 GBP4Q96PP9 640 aa15.37■□□□□ 0.05
SCN3B-206ENST00000530277 EID1Q9Y6B2 187 aa15.37■□□□□ 0.05
SCN3B-206ENST00000530277 NOS1P29475 1434 aa15.37■□□□□ 0.05
SCN3B-206ENST00000530277 CSB-PGBD3P0DP91 1061 aa15.37■□□□□ 0.05
SCN3B-206ENST00000530277 L1TD1Q5T7N2 865 aaKnown RBP15.36■□□□□ 0.05
SCN3B-206ENST00000530277 ATF7IPQ6VMQ6 1270 aa15.36■□□□□ 0.05
SCN3B-206ENST00000530277 NME9Q86XW9 330 aa15.36■□□□□ 0.05
SCN3B-206ENST00000530277 PCDHB15Q9Y5E8 787 aa15.36■□□□□ 0.05
SCN3B-206ENST00000530277 RLBP1P12271 317 aa15.36■□□□□ 0.05
SCN3B-206ENST00000530277 MVPQ14764 893 aaKnown RBP15.36■□□□□ 0.05
SCN3B-206ENST00000530277 TWISTNBQ3B726 338 aaPredicted RBP15.36■□□□□ 0.05
SCN3B-206ENST00000530277 KIAA0556O60303 1618 aa15.36■□□□□ 0.05
SCN3B-206ENST00000530277 STAC3Q96MF2 364 aa15.35■□□□□ 0.05
SCN3B-206ENST00000530277 VSIG10Q8N0Z9 540 aa15.35■□□□□ 0.05
SCN3B-206ENST00000530277 TSPYL4Q9UJ04 414 aa15.35■□□□□ 0.05
SCN3B-206ENST00000530277 DDX49Q9Y6V7 483 aaKnown RBP15.35■□□□□ 0.05
SCN3B-206ENST00000530277 PARD3Q8TEW0 1356 aa15.35■□□□□ 0.05
SCN3B-206ENST00000530277 RALGAPBQ86X10 1494 aa15.35■□□□□ 0.05
SCN3B-206ENST00000530277 ADAMTS12P58397 1594 aa15.35■□□□□ 0.05
SCN3B-206ENST00000530277 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
SCN3B-206ENST00000530277 CHMP3Q9Y3E7 222 aa15.34■□□□□ 0.05
SCN3B-206ENST00000530277 NLRP6P59044 892 aa15.34■□□□□ 0.05
SCN3B-206ENST00000530277 LMOD3Q0VAK6 560 aa15.34■□□□□ 0.05
SCN3B-206ENST00000530277 SEC24BO95487 1268 aa15.33■□□□□ 0.04
SCN3B-206ENST00000530277 MCM10Q7L590 875 aa15.33■□□□□ 0.04
SCN3B-206ENST00000530277 ZRANB1Q9UGI0 708 aa15.33■□□□□ 0.04
SCN3B-206ENST00000530277 KIF16BQ96L93 1317 aa15.33■□□□□ 0.04
SCN3B-206ENST00000530277 FAM135AQ9P2D6 1515 aa15.33■□□□□ 0.04
SCN3B-206ENST00000530277 GNAI1P63096 354 aa15.33■□□□□ 0.04
SCN3B-206ENST00000530277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.32■□□□□ 0.04
SCN3B-206ENST00000530277 ADGRL1O94910 1474 aa15.32■□□□□ 0.04
SCN3B-206ENST00000530277 NCKAP5LQ9HCH0 1330 aa15.32■□□□□ 0.04
SCN3B-206ENST00000530277 SPATA31E1Q6ZUB1 1445 aa15.31■□□□□ 0.04
SCN3B-206ENST00000530277 HMMRO75330 724 aa15.31■□□□□ 0.04
SCN3B-206ENST00000530277 TRIM27P14373 513 aa15.31■□□□□ 0.04
SCN3B-206ENST00000530277 KIAA1211Q6ZU35 1233 aa15.31■□□□□ 0.04
SCN3B-206ENST00000530277 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.31■□□□□ 0.04
SCN3B-206ENST00000530277 ANO2Q9NQ90 1003 aa15.31■□□□□ 0.04
SCN3B-206ENST00000530277 MCCP23508 829 aa15.3■□□□□ 0.04
SCN3B-206ENST00000530277 CEBPAP49715 358 aaPredicted RBP15.3■□□□□ 0.04
SCN3B-206ENST00000530277 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
SCN3B-206ENST00000530277 XPCQ01831 940 aaPredicted RBP15.3■□□□□ 0.04
SCN3B-206ENST00000530277 WDR63Q8IWG1 891 aa15.29■□□□□ 0.04
SCN3B-206ENST00000530277 CHMP5Q9NZZ3 219 aa15.29■□□□□ 0.04
SCN3B-206ENST00000530277 CFAP65Q6ZU64 1925 aaKnown RBP15.29■□□□□ 0.04
SCN3B-206ENST00000530277 GPRASP1Q5JY77 1395 aa15.28■□□□□ 0.04
SCN3B-206ENST00000530277 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
SCN3B-206ENST00000530277 API5Q9BZZ5 524 aaKnown RBP15.28■□□□□ 0.04
SCN3B-206ENST00000530277 SAMD9Q5K651 1589 aa15.28■□□□□ 0.04
SCN3B-206ENST00000530277 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
SCN3B-206ENST00000530277 SMARCA5O60264 1052 aaPredicted RBP15.28■□□□□ 0.04
SCN3B-206ENST00000530277 FANCAO15360 1455 aa15.28■□□□□ 0.04
SCN3B-206ENST00000530277 SCAF11Q99590 1463 aaKnown RBP15.27■□□□□ 0.04
SCN3B-206ENST00000530277 MPNDQ8N594 471 aa15.27■□□□□ 0.04
SCN3B-206ENST00000530277 TEFQ10587 303 aa15.27■□□□□ 0.04
SCN3B-206ENST00000530277 LRPPRCP42704 1394 aaKnown RBP15.27■□□□□ 0.04
SCN3B-206ENST00000530277 NKTRP30414 1462 aaKnown RBP15.27■□□□□ 0.03
SCN3B-206ENST00000530277 CD109Q6YHK3 1445 aa15.27■□□□□ 0.03
SCN3B-206ENST00000530277 A2MP01023 1474 aa15.27■□□□□ 0.03
SCN3B-206ENST00000530277 MAP4K4O95819 1239 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-206ENST00000530277 F6X3S4 739 aa15.26■□□□□ 0.03
SCN3B-206ENST00000530277 MSNP26038 577 aaKnown RBP15.26■□□□□ 0.03
SCN3B-206ENST00000530277 SLC52A1Q9NWF4 448 aa15.26■□□□□ 0.03
SCN3B-206ENST00000530277 MCTP1Q6DN14 999 aa15.26■□□□□ 0.03
SCN3B-206ENST00000530277 C14orf93Q9H972 538 aaKnown RBP15.26■□□□□ 0.03
SCN3B-206ENST00000530277 DNMT1P26358 1616 aaKnown RBP15.25■□□□□ 0.03
SCN3B-206ENST00000530277 EIF4G3O43432 1585 aaKnown RBP15.25■□□□□ 0.03
SCN3B-206ENST00000530277 GOLGA6L4A6NEF3 574 aa15.25■□□□□ 0.03
SCN3B-206ENST00000530277 ST18O60284 1047 aa15.25■□□□□ 0.03
SCN3B-206ENST00000530277 TRAK2O60296 914 aa15.25■□□□□ 0.03
SCN3B-206ENST00000530277 KRT24Q2M2I5 525 aa15.25■□□□□ 0.03
SCN3B-206ENST00000530277 C8orf34Q49A92 452 aa15.25■□□□□ 0.03
SCN3B-206ENST00000530277 NUDT16Q96DE0 195 aaKnown RBP15.25■□□□□ 0.03
SCN3B-206ENST00000530277 ABTB2Q8N961 1025 aa15.24■□□□□ 0.03
SCN3B-206ENST00000530277 DENND4BO75064 1496 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms