RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PROSER2Q86WR7 435 aaPredicted RBP20.04■□□□□ 0.8
TTC39A-216ENST00000530004 SAFB2Q14151 953 aaKnown RBP eCLIP20.03■□□□□ 0.8
TTC39A-216ENST00000530004 KIF7Q2M1P5 1343 aa20.03■□□□□ 0.8
TTC39A-216ENST00000530004 RBM33Q96EV2 1170 aaKnown RBP20.02■□□□□ 0.8
TTC39A-216ENST00000530004 TMEM94Q12767 1356 aa20■□□□□ 0.79
TTC39A-216ENST00000530004 LTBP4Q8N2S1 1624 aa20■□□□□ 0.79
TTC39A-216ENST00000530004 LRRC7Q96NW7 1537 aa20■□□□□ 0.79
TTC39A-216ENST00000530004 TESK2Q96S53 571 aa19.99■□□□□ 0.79
TTC39A-216ENST00000530004 SBNO2Q9Y2G9 1366 aa19.98■□□□□ 0.79
TTC39A-216ENST00000530004 NCOA3Q9Y6Q9 1424 aa19.98■□□□□ 0.79
TTC39A-216ENST00000530004 MINK1Q8N4C8 1332 aaPredicted RBP19.97■□□□□ 0.79
TTC39A-216ENST00000530004 POLR3GLQ9BT43 218 aa19.95■□□□□ 0.78
TTC39A-216ENST00000530004 ADGRL3Q9HAR2 1447 aa19.95■□□□□ 0.78
TTC39A-216ENST00000530004 C14orf37Q86TY3 774 aa19.95■□□□□ 0.78
TTC39A-216ENST00000530004 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.95■□□□□ 0.78
TTC39A-216ENST00000530004 QRICH2Q9H0J4 1663 aa19.95■□□□□ 0.78
TTC39A-216ENST00000530004 SLC24A1O60721 1099 aa19.93■□□□□ 0.78
TTC39A-216ENST00000530004 C19orf44Q9H6X5 657 aa19.92■□□□□ 0.78
TTC39A-216ENST00000530004 ADGRB2O60241 1585 aa19.9■□□□□ 0.78
TTC39A-216ENST00000530004 TMF1P82094 1093 aa19.9■□□□□ 0.78
TTC39A-216ENST00000530004 EVC2Q86UK5 1308 aa19.9■□□□□ 0.78
TTC39A-216ENST00000530004 NALCNQ8IZF0 1738 aa19.9■□□□□ 0.78
TTC39A-216ENST00000530004 WASLO00401 505 aaPredicted RBP19.9■□□□□ 0.78
TTC39A-216ENST00000530004 ANP32CO43423 234 aa19.9■□□□□ 0.78
TTC39A-216ENST00000530004 MSH6P52701 1360 aa19.9■□□□□ 0.78
TTC39A-216ENST00000530004 TULP4Q9NRJ4 1543 aa19.89■□□□□ 0.77
TTC39A-216ENST00000530004 DISP3Q9P2K9 1392 aa19.89■□□□□ 0.77
TTC39A-216ENST00000530004 XIRP1Q702N8 1843 aaKnown RBP19.89■□□□□ 0.77
TTC39A-216ENST00000530004 CDK19Q9BWU1 502 aa19.88■□□□□ 0.77
TTC39A-216ENST00000530004 DCCP43146 1447 aa19.87■□□□□ 0.77
TTC39A-216ENST00000530004 CDC42BPGQ6DT37 1551 aa19.87■□□□□ 0.77
TTC39A-216ENST00000530004 SRPK2P78362 688 aaKnown RBP19.85■□□□□ 0.77
TTC39A-216ENST00000530004 ATF3P18847 181 aa19.85■□□□□ 0.77
TTC39A-216ENST00000530004 CADPS2Q86UW7 1296 aa19.85■□□□□ 0.77
TTC39A-216ENST00000530004 CABP2Q9NPB3 220 aa19.85■□□□□ 0.77
TTC39A-216ENST00000530004 CDCA8Q53HL2 280 aa19.84■□□□□ 0.77
TTC39A-216ENST00000530004 PUS7Q96PZ0 661 aaKnown RBP19.83■□□□□ 0.77
TTC39A-216ENST00000530004 NUTM2FA1L443 756 aa19.83■□□□□ 0.76
TTC39A-216ENST00000530004 CERKQ8TCT0 537 aa19.83■□□□□ 0.76
TTC39A-216ENST00000530004 PRR36Q9H6K5 1346 aa19.81■□□□□ 0.76
TTC39A-216ENST00000530004 IQSEC2Q5JU85 1478 aa19.81■□□□□ 0.76
TTC39A-216ENST00000530004 NUDT16Q96DE0 195 aaKnown RBP19.8■□□□□ 0.76
TTC39A-216ENST00000530004 ATAD2Q6PL18 1390 aa19.8■□□□□ 0.76
TTC39A-216ENST00000530004 ANKARQ7Z5J8 1434 aa19.8■□□□□ 0.76
TTC39A-216ENST00000530004 ATP7BP35670 1465 aa19.79■□□□□ 0.76
TTC39A-216ENST00000530004 FMN2Q9NZ56 1722 aa19.79■□□□□ 0.76
TTC39A-216ENST00000530004 MST1RQ04912 1400 aa19.79■□□□□ 0.76
TTC39A-216ENST00000530004 CCDC61Q9Y6R9 512 aa19.78■□□□□ 0.76
TTC39A-216ENST00000530004 C1orf167Q5SNV9 1468 aa19.77■□□□□ 0.76
TTC39A-216ENST00000530004 SLAIN2Q9P270 581 aa19.76■□□□□ 0.75
TTC39A-216ENST00000530004 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
TTC39A-216ENST00000530004 CCER2I3L3R5 266 aa19.75■□□□□ 0.75
TTC39A-216ENST00000530004 TOM1O60784 492 aa19.73■□□□□ 0.75
TTC39A-216ENST00000530004 ESCO1Q5FWF5 840 aa19.73■□□□□ 0.75
TTC39A-216ENST00000530004 ORAI2Q96SN7 254 aa19.73■□□□□ 0.75
TTC39A-216ENST00000530004 PRKRIP1Q9H875 184 aaPredicted RBP19.73■□□□□ 0.75
TTC39A-216ENST00000530004 CABP1Q9NZU7 370 aa19.73■□□□□ 0.75
TTC39A-216ENST00000530004 PPIP5K1Q6PFW1 1433 aa19.73■□□□□ 0.75
TTC39A-216ENST00000530004 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
TTC39A-216ENST00000530004 YTHDC1Q96MU7 727 aaKnown RBP19.72■□□□□ 0.75
TTC39A-216ENST00000530004 SLC12A5Q9H2X9 1139 aa19.72■□□□□ 0.75
TTC39A-216ENST00000530004 NINLQ9Y2I6 1382 aa19.72■□□□□ 0.75
TTC39A-216ENST00000530004 PLEKHG3A1L390 1219 aa19.71■□□□□ 0.75
TTC39A-216ENST00000530004 PHF8Q9UPP1 1060 aa19.7■□□□□ 0.74
TTC39A-216ENST00000530004 TOPAZ1Q8N9V7 1692 aa19.7■□□□□ 0.74
TTC39A-216ENST00000530004 UBAP1LF5GYI3 381 aa19.7■□□□□ 0.74
TTC39A-216ENST00000530004 PMFBP1Q8TBY8 1022 aa19.7■□□□□ 0.74
TTC39A-216ENST00000530004 PANK3Q9H999 370 aa19.7■□□□□ 0.74
TTC39A-216ENST00000530004 BRINP3Q76B58 766 aa19.69■□□□□ 0.74
TTC39A-216ENST00000530004 RGPD8O14715 1765 aaPredicted RBP19.68■□□□□ 0.74
TTC39A-216ENST00000530004 MYOM1P52179 1685 aa19.67■□□□□ 0.74
TTC39A-216ENST00000530004 ITSN1Q15811 1721 aa19.67■□□□□ 0.74
TTC39A-216ENST00000530004 CNGB1Q14028 1251 aaPredicted RBP19.67■□□□□ 0.74
TTC39A-216ENST00000530004 ACEP12821 1306 aa19.66■□□□□ 0.74
TTC39A-216ENST00000530004 POLR3AO14802 1390 aaPredicted RBP19.66■□□□□ 0.74
TTC39A-216ENST00000530004 PER1O15534 1290 aaPredicted RBP19.66■□□□□ 0.74
TTC39A-216ENST00000530004 NGDNQ8NEJ9 315 aaKnown RBP19.65■□□□□ 0.74
TTC39A-216ENST00000530004 CD163L1Q9NR16 1453 aa19.65■□□□□ 0.74
TTC39A-216ENST00000530004 ANKRD36BQ8N2N9 1353 aa19.65■□□□□ 0.74
TTC39A-216ENST00000530004 CPSF1Q10570 1443 aaKnown RBP19.65■□□□□ 0.74
TTC39A-216ENST00000530004 FOXO3O43524 673 aa19.65■□□□□ 0.74
TTC39A-216ENST00000530004 TERF2IPQ9NYB0 399 aa19.65■□□□□ 0.74
TTC39A-216ENST00000530004 A0A1W2PP64 1363 aa19.64■□□□□ 0.73
TTC39A-216ENST00000530004 PIP4K2BP78356 416 aa19.64■□□□□ 0.73
TTC39A-216ENST00000530004 HDGFL2Q7Z4V5 671 aaPredicted RBP19.63■□□□□ 0.73
TTC39A-216ENST00000530004 ZNF692Q9BU19 519 aaPredicted RBP19.63■□□□□ 0.73
TTC39A-216ENST00000530004 KIF1AQ12756 1690 aa19.62■□□□□ 0.73
TTC39A-216ENST00000530004 NPHP3Q7Z494 1330 aa19.61■□□□□ 0.73
TTC39A-216ENST00000530004 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
TTC39A-216ENST00000530004 DDX17Q92841 729 aaKnown RBP19.6■□□□□ 0.73
TTC39A-216ENST00000530004 KTN1Q86UP2 1357 aaKnown RBP19.6■□□□□ 0.73
TTC39A-216ENST00000530004 ROBO1Q9Y6N7 1651 aa19.6■□□□□ 0.73
TTC39A-216ENST00000530004 PSME1Q06323 249 aa19.6■□□□□ 0.73
TTC39A-216ENST00000530004 USP6P35125 1406 aa19.59■□□□□ 0.73
TTC39A-216ENST00000530004 CARD14Q9BXL6 1004 aa19.59■□□□□ 0.73
TTC39A-216ENST00000530004 XPCQ01831 940 aaPredicted RBP19.57■□□□□ 0.72
TTC39A-216ENST00000530004 RALBP1Q15311 655 aa19.57■□□□□ 0.72
TTC39A-216ENST00000530004 CCDC184Q52MB2 194 aa19.57■□□□□ 0.72
TTC39A-216ENST00000530004 KRT28Q7Z3Y7 464 aa19.57■□□□□ 0.72
TTC39A-216ENST00000530004 KNSTRNQ9Y448 316 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms