RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 ASXL1Q8IXJ9 1541 aa5.5□□□□□ -1.53
PTPRC-213ENST00000529828 ANKRD50Q9ULJ7 1429 aa5.5□□□□□ -1.53
PTPRC-213ENST00000529828 RPRD2Q5VT52 1461 aaKnown RBP5.5□□□□□ -1.53
PTPRC-213ENST00000529828 ADAMTS2O95450 1211 aa5.49□□□□□ -1.53
PTPRC-213ENST00000529828 HDGFP51858 240 aaKnown RBP5.49□□□□□ -1.53
PTPRC-213ENST00000529828 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTPRC-213ENST00000529828 ADGRL2O95490 1459 aa5.49□□□□□ -1.53
PTPRC-213ENST00000529828 NCOA3Q9Y6Q9 1424 aa5.49□□□□□ -1.53
PTPRC-213ENST00000529828 QTRT2Q9H974 415 aaKnown RBP5.49□□□□□ -1.53
PTPRC-213ENST00000529828 CDK12Q9NYV4 1490 aaPredicted RBP5.49□□□□□ -1.53
PTPRC-213ENST00000529828 MST1RQ04912 1400 aa5.49□□□□□ -1.53
PTPRC-213ENST00000529828 TRPM2O94759 1503 aa5.48□□□□□ -1.53
PTPRC-213ENST00000529828 PNPLA6Q8IY17 1366 aa5.48□□□□□ -1.53
PTPRC-213ENST00000529828 RBM6P78332 1123 aaKnown RBP5.48□□□□□ -1.53
PTPRC-213ENST00000529828 UNC13BO14795 1591 aa5.48□□□□□ -1.53
PTPRC-213ENST00000529828 SETD5Q9C0A6 1442 aa5.48□□□□□ -1.53
PTPRC-213ENST00000529828 E9PCH4 1651 aa5.47□□□□□ -1.53
PTPRC-213ENST00000529828 PIK3R4Q99570 1358 aa5.47□□□□□ -1.53
PTPRC-213ENST00000529828 NHSL1Q5SYE7 1610 aa5.47□□□□□ -1.53
PTPRC-213ENST00000529828 LRRC59Q96AG4 307 aaKnown RBP5.47□□□□□ -1.53
PTPRC-213ENST00000529828 NGLY1Q96IV0 654 aa5.47□□□□□ -1.53
PTPRC-213ENST00000529828 METP08581 1390 aa5.47□□□□□ -1.53
PTPRC-213ENST00000529828 NRXN3Q9Y4C0 1643 aa5.46□□□□□ -1.53
PTPRC-213ENST00000529828 ZNF326Q5BKZ1 582 aaKnown RBP5.46□□□□□ -1.54
PTPRC-213ENST00000529828 DCCP43146 1447 aa5.46□□□□□ -1.54
PTPRC-213ENST00000529828 XRN1Q8IZH2 1706 aaKnown RBP5.46□□□□□ -1.54
PTPRC-213ENST00000529828 ATXN8OSP0DMR3 200 aa5.46□□□□□ -1.54
PTPRC-213ENST00000529828 ITGAEP38570 1179 aa5.46□□□□□ -1.54
PTPRC-213ENST00000529828 ATAD2Q6PL18 1390 aa5.46□□□□□ -1.54
PTPRC-213ENST00000529828 SETBP1Q9Y6X0 1596 aa5.46□□□□□ -1.54
PTPRC-213ENST00000529828 NALCNQ8IZF0 1738 aa5.45□□□□□ -1.54
PTPRC-213ENST00000529828 ADGRL3Q9HAR2 1447 aa5.45□□□□□ -1.54
PTPRC-213ENST00000529828 NUP155O75694 1391 aa5.45□□□□□ -1.54
PTPRC-213ENST00000529828 USP21Q9UK80 565 aa5.45□□□□□ -1.54
PTPRC-213ENST00000529828 ORAI2Q96SN7 254 aa5.45□□□□□ -1.54
PTPRC-213ENST00000529828 IQGAP3Q86VI3 1631 aa5.44□□□□□ -1.54
PTPRC-213ENST00000529828 C1orf167Q5SNV9 1468 aa5.44□□□□□ -1.54
PTPRC-213ENST00000529828 ZRANB1Q9UGI0 708 aa5.44□□□□□ -1.54
PTPRC-213ENST00000529828 SSUH2Q9Y2M2 353 aa5.44□□□□□ -1.54
PTPRC-213ENST00000529828 DCBLD2Q96PD2 775 aa5.43□□□□□ -1.54
PTPRC-213ENST00000529828 TRPC5Q9UL62 973 aaPredicted RBP5.43□□□□□ -1.54
PTPRC-213ENST00000529828 PRR29P0C7W0 189 aa5.43□□□□□ -1.54
PTPRC-213ENST00000529828 XPCQ01831 940 aaPredicted RBP5.43□□□□□ -1.54
PTPRC-213ENST00000529828 ZNF692Q9BU19 519 aaPredicted RBP5.43□□□□□ -1.54
PTPRC-213ENST00000529828 ATRNO75882 1429 aa5.43□□□□□ -1.54
PTPRC-213ENST00000529828 ROBO2Q9HCK4 1378 aa5.43□□□□□ -1.54
PTPRC-213ENST00000529828 POTEIP0CG38 1075 aa5.42□□□□□ -1.54
PTPRC-213ENST00000529828 CD44P16070 742 aaKnown RBP5.42□□□□□ -1.54
PTPRC-213ENST00000529828 NEXMIFQ5QGS0 1516 aa5.41□□□□□ -1.54
PTPRC-213ENST00000529828 SOS2Q07890 1332 aaPredicted RBP5.41□□□□□ -1.54
PTPRC-213ENST00000529828 CLTCL1P53675 1640 aa5.41□□□□□ -1.54
PTPRC-213ENST00000529828 NUTM2FA1L443 756 aa5.41□□□□□ -1.54
PTPRC-213ENST00000529828 PLEKHG5O94827 1062 aa5.41□□□□□ -1.54
PTPRC-213ENST00000529828 PPARGC1BQ86YN6 1023 aaKnown RBP5.41□□□□□ -1.54
PTPRC-213ENST00000529828 FNBP4Q8N3X1 1017 aaPredicted RBP5.41□□□□□ -1.54
PTPRC-213ENST00000529828 PTCH1Q13635 1447 aa5.41□□□□□ -1.54
PTPRC-213ENST00000529828 SPHKAPQ2M3C7 1700 aa5.41□□□□□ -1.54
PTPRC-213ENST00000529828 ROCK1Q13464 1354 aa5.41□□□□□ -1.54
PTPRC-213ENST00000529828 DEFB132Q7Z7B7 95 aa5.41□□□□□ -1.54
PTPRC-213ENST00000529828 MYOM2P54296 1465 aa5.4□□□□□ -1.54
PTPRC-213ENST00000529828 BCL9LQ86UU0 1499 aa5.4□□□□□ -1.54
PTPRC-213ENST00000529828 ESCO1Q5FWF5 840 aa5.4□□□□□ -1.54
PTPRC-213ENST00000529828 CHADLQ6NUI6 762 aa5.4□□□□□ -1.54
PTPRC-213ENST00000529828 LAMC1P11047 1609 aa5.4□□□□□ -1.55
PTPRC-213ENST00000529828 FOXO3O43524 673 aa5.39□□□□□ -1.55
PTPRC-213ENST00000529828 GJD4Q96KN9 370 aaPredicted RBP5.39□□□□□ -1.55
PTPRC-213ENST00000529828 COL22A1Q8NFW1 1626 aaPredicted RBP5.39□□□□□ -1.55
PTPRC-213ENST00000529828 PSDA5PKW4 1024 aaPredicted RBP5.39□□□□□ -1.55
PTPRC-213ENST00000529828 RALGAPBQ86X10 1494 aa5.38□□□□□ -1.55
PTPRC-213ENST00000529828 PXDNQ92626 1479 aa5.38□□□□□ -1.55
PTPRC-213ENST00000529828 NPHP3Q7Z494 1330 aa5.38□□□□□ -1.55
PTPRC-213ENST00000529828 GLI3P10071 1580 aa5.38□□□□□ -1.55
PTPRC-213ENST00000529828 STK26Q9P289 416 aa5.38□□□□□ -1.55
PTPRC-213ENST00000529828 BLMP54132 1417 aaPredicted RBP5.38□□□□□ -1.55
PTPRC-213ENST00000529828 CCDC125Q86Z20 511 aa5.37□□□□□ -1.55
PTPRC-213ENST00000529828 SLC4A1APQ9BWU0 796 aaKnown RBP5.37□□□□□ -1.55
PTPRC-213ENST00000529828 HFM1A2PYH4 1435 aa5.37□□□□□ -1.55
PTPRC-213ENST00000529828 POTEMA6NI47 508 aa5.37□□□□□ -1.55
PTPRC-213ENST00000529828 WAPLQ7Z5K2 1190 aa5.37□□□□□ -1.55
PTPRC-213ENST00000529828 UNC5CLQ8IV45 518 aa5.37□□□□□ -1.55
PTPRC-213ENST00000529828 CABLES1Q8TDN4 633 aa5.37□□□□□ -1.55
PTPRC-213ENST00000529828 CCDC9Q9Y3X0 531 aaKnown RBP5.37□□□□□ -1.55
PTPRC-213ENST00000529828 NAIPQ13075 1403 aa5.37□□□□□ -1.55
PTPRC-213ENST00000529828 UTRNP46939 3433 aa5.36□□□□□ -1.55
PTPRC-213ENST00000529828 PLEKHH1Q9ULM0 1364 aa5.36□□□□□ -1.55
PTPRC-213ENST00000529828 A0A0G2JS52 829 aa5.36□□□□□ -1.55
PTPRC-213ENST00000529828 VGFO15240 615 aaPredicted RBP5.36□□□□□ -1.55
PTPRC-213ENST00000529828 MYT1Q01538 1121 aa5.36□□□□□ -1.55
PTPRC-213ENST00000529828 SF3B2Q13435 895 aaKnown RBP5.36□□□□□ -1.55
PTPRC-213ENST00000529828 SEPT12Q8IYM1 358 aa5.36□□□□□ -1.55
PTPRC-213ENST00000529828 CDC42BPGQ6DT37 1551 aa5.36□□□□□ -1.55
PTPRC-213ENST00000529828 SLIT2O94813 1529 aa5.36□□□□□ -1.55
PTPRC-213ENST00000529828 MARF1Q9Y4F3 1742 aaKnown RBP5.36□□□□□ -1.55
PTPRC-213ENST00000529828 HAP1P54257 671 aaPredicted RBP5.36□□□□□ -1.55
PTPRC-213ENST00000529828 FARP1Q9Y4F1 1045 aaPredicted RBP5.36□□□□□ -1.55
PTPRC-213ENST00000529828 KIF1BO60333 1816 aa5.36□□□□□ -1.55
PTPRC-213ENST00000529828 LMOD2Q6P5Q4 547 aa5.35□□□□□ -1.55
PTPRC-213ENST00000529828 ZNF579Q8NAF0 562 aaKnown RBP5.35□□□□□ -1.55
PTPRC-213ENST00000529828 BRWD3Q6RI45 1802 aa5.35□□□□□ -1.55
PTPRC-213ENST00000529828 SPATA31A3Q5VYP0 1347 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms