RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 PRKRIP1Q9H875 184 aaPredicted RBP22.81■■□□□ 1.24
PACS1-209ENST00000529757 PIK3R4Q99570 1358 aa22.81■■□□□ 1.24
PACS1-209ENST00000529757 ROBO2Q9HCK4 1378 aa22.79■■□□□ 1.24
PACS1-209ENST00000529757 NPHP4O75161 1426 aaPredicted RBP22.79■■□□□ 1.24
PACS1-209ENST00000529757 PER1O15534 1290 aaPredicted RBP22.78■■□□□ 1.24
PACS1-209ENST00000529757 AMOTL2Q9Y2J4 779 aa22.77■■□□□ 1.24
PACS1-209ENST00000529757 PTCH1Q13635 1447 aa22.76■■□□□ 1.23
PACS1-209ENST00000529757 SRPK2P78362 688 aaKnown RBP22.76■■□□□ 1.23
PACS1-209ENST00000529757 CABP2Q9NPB3 220 aa22.76■■□□□ 1.23
PACS1-209ENST00000529757 XRN1Q8IZH2 1706 aaKnown RBP22.76■■□□□ 1.23
PACS1-209ENST00000529757 ATAD2Q6PL18 1390 aa22.74■■□□□ 1.23
PACS1-209ENST00000529757 CDK19Q9BWU1 502 aa22.74■■□□□ 1.23
PACS1-209ENST00000529757 NCKAP5LQ9HCH0 1330 aa22.74■■□□□ 1.23
PACS1-209ENST00000529757 TMC1Q8TDI8 760 aa22.73■■□□□ 1.23
PACS1-209ENST00000529757 KTN1Q86UP2 1357 aaKnown RBP22.73■■□□□ 1.23
PACS1-209ENST00000529757 NINLQ9Y2I6 1382 aa22.72■■□□□ 1.23
PACS1-209ENST00000529757 KNSTRNQ9Y448 316 aa22.71■■□□□ 1.23
PACS1-209ENST00000529757 CNGB1Q14028 1251 aaPredicted RBP22.71■■□□□ 1.23
PACS1-209ENST00000529757 SLC12A5Q9H2X9 1139 aa22.7■■□□□ 1.22
PACS1-209ENST00000529757 ADGRB2O60241 1585 aa22.69■■□□□ 1.22
PACS1-209ENST00000529757 WASLO00401 505 aaPredicted RBP22.69■■□□□ 1.22
PACS1-209ENST00000529757 RALBP1Q15311 655 aa22.69■■□□□ 1.22
PACS1-209ENST00000529757 CHD2O14647 1828 aaKnown RBP22.69■■□□□ 1.22
PACS1-209ENST00000529757 LMTK3Q96Q04 1460 aa22.68■■□□□ 1.22
PACS1-209ENST00000529757 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.68■■□□□ 1.22
PACS1-209ENST00000529757 KCNA6P17658 529 aa22.68■■□□□ 1.22
PACS1-209ENST00000529757 ANKRD36BQ8N2N9 1353 aa22.66■■□□□ 1.22
PACS1-209ENST00000529757 PARD3Q8TEW0 1356 aa22.66■■□□□ 1.22
PACS1-209ENST00000529757 HSPA2P54652 639 aa22.65■■□□□ 1.22
PACS1-209ENST00000529757 AMER1Q5JTC6 1135 aaPredicted RBP22.65■■□□□ 1.22
PACS1-209ENST00000529757 CARD14Q9BXL6 1004 aa22.65■■□□□ 1.22
PACS1-209ENST00000529757 NPC1L1Q9UHC9 1359 aa22.64■■□□□ 1.22
PACS1-209ENST00000529757 CC2D1BQ5T0F9 858 aaKnown RBP22.64■■□□□ 1.21
PACS1-209ENST00000529757 YTHDC1Q96MU7 727 aaKnown RBP22.62■■□□□ 1.21
PACS1-209ENST00000529757 MYBBP1AQ9BQG0 1328 aaKnown RBP22.62■■□□□ 1.21
PACS1-209ENST00000529757 NSD3Q9BZ95 1437 aa22.62■■□□□ 1.21
PACS1-209ENST00000529757 NWD1Q149M9 1564 aa22.61■■□□□ 1.21
PACS1-209ENST00000529757 TERF2IPQ9NYB0 399 aa22.61■■□□□ 1.21
PACS1-209ENST00000529757 A0A1W2PP64 1363 aa22.59■■□□□ 1.21
PACS1-209ENST00000529757 USP32Q8NFA0 1604 aa22.59■■□□□ 1.21
PACS1-209ENST00000529757 NUDT16Q96DE0 195 aaKnown RBP22.59■■□□□ 1.21
PACS1-209ENST00000529757 MRS2Q9HD23 443 aa22.59■■□□□ 1.21
PACS1-209ENST00000529757 CABP1Q9NZU7 370 aa22.59■■□□□ 1.21
PACS1-209ENST00000529757 ATP7BP35670 1465 aa22.58■■□□□ 1.21
PACS1-209ENST00000529757 CD163L1Q9NR16 1453 aa22.58■■□□□ 1.21
PACS1-209ENST00000529757 CCDC184Q52MB2 194 aa22.58■■□□□ 1.2
PACS1-209ENST00000529757 PPIP5K1Q6PFW1 1433 aa22.57■■□□□ 1.2
PACS1-209ENST00000529757 HDGFL2Q7Z4V5 671 aaPredicted RBP22.57■■□□□ 1.2
PACS1-209ENST00000529757 CCDC61Q9Y6R9 512 aa22.56■■□□□ 1.2
PACS1-209ENST00000529757 CGNL1Q0VF96 1302 aa22.55■■□□□ 1.2
PACS1-209ENST00000529757 PRR36Q9H6K5 1346 aa22.55■■□□□ 1.2
PACS1-209ENST00000529757 BRD4O60885 1362 aaPredicted RBP22.54■■□□□ 1.2
PACS1-209ENST00000529757 NLRP13Q86W25 1043 aa22.54■■□□□ 1.2
PACS1-209ENST00000529757 NKTRP30414 1462 aaKnown RBP22.53■■□□□ 1.2
PACS1-209ENST00000529757 TOPAZ1Q8N9V7 1692 aa22.52■■□□□ 1.2
PACS1-209ENST00000529757 STRCQ7RTU9 1775 aa22.52■■□□□ 1.2
PACS1-209ENST00000529757 NSD2O96028 1365 aa22.52■■□□□ 1.2
PACS1-209ENST00000529757 CDC42BPGQ6DT37 1551 aa22.52■■□□□ 1.2
PACS1-209ENST00000529757 NALCNQ8IZF0 1738 aa22.52■■□□□ 1.2
PACS1-209ENST00000529757 CPSF1Q10570 1443 aaKnown RBP22.5■■□□□ 1.19
PACS1-209ENST00000529757 ADGRL3Q9HAR2 1447 aa22.5■■□□□ 1.19
PACS1-209ENST00000529757 ANKARQ7Z5J8 1434 aa22.49■■□□□ 1.19
PACS1-209ENST00000529757 FMN2Q9NZ56 1722 aa22.49■■□□□ 1.19
PACS1-209ENST00000529757 NUTM2FA1L443 756 aa22.48■■□□□ 1.19
PACS1-209ENST00000529757 ITSN1Q15811 1721 aa22.47■■□□□ 1.19
PACS1-209ENST00000529757 PPP2R1AP30153 589 aa22.47■■□□□ 1.19
PACS1-209ENST00000529757 PROSER2Q86WR7 435 aaPredicted RBP22.47■■□□□ 1.19
PACS1-209ENST00000529757 PLEKHG3A1L390 1219 aa22.46■■□□□ 1.19
PACS1-209ENST00000529757 RBM33Q96EV2 1170 aaKnown RBP22.46■■□□□ 1.19
PACS1-209ENST00000529757 MORC1Q86VD1 984 aa22.46■■□□□ 1.19
PACS1-209ENST00000529757 AKAP12Q02952 1782 aa22.45■■□□□ 1.18
PACS1-209ENST00000529757 EDC4Q6P2E9 1401 aaKnown RBP22.45■■□□□ 1.18
PACS1-209ENST00000529757 CENPBP07199 599 aaPredicted RBP22.45■■□□□ 1.18
PACS1-209ENST00000529757 C14orf37Q86TY3 774 aa22.45■■□□□ 1.18
PACS1-209ENST00000529757 ZNF692Q9BU19 519 aaPredicted RBP22.45■■□□□ 1.18
PACS1-209ENST00000529757 FAM9BQ8IZU0 186 aa22.44■■□□□ 1.18
PACS1-209ENST00000529757 MON2Q7Z3U7 1717 aa22.44■■□□□ 1.18
PACS1-209ENST00000529757 STRCP1A6NGW2 1772 aa22.42■■□□□ 1.18
PACS1-209ENST00000529757 ACEP12821 1306 aa22.42■■□□□ 1.18
PACS1-209ENST00000529757 PNISRQ8TF01 805 aaKnown RBP22.42■■□□□ 1.18
PACS1-209ENST00000529757 KIF20BQ96Q89 1820 aa22.41■■□□□ 1.18
PACS1-209ENST00000529757 FYB1O15117 783 aa22.41■■□□□ 1.18
PACS1-209ENST00000529757 ANKRD26Q9UPS8 1709 aa22.4■■□□□ 1.18
PACS1-209ENST00000529757 RGPD8O14715 1765 aaPredicted RBP22.4■■□□□ 1.18
PACS1-209ENST00000529757 GGNBP2Q9H3C7 697 aa22.39■■□□□ 1.18
PACS1-209ENST00000529757 NCOA3Q9Y6Q9 1424 aa22.39■■□□□ 1.18
PACS1-209ENST00000529757 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.39■■□□□ 1.17
PACS1-209ENST00000529757 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
PACS1-209ENST00000529757 TMEM94Q12767 1356 aa22.38■■□□□ 1.17
PACS1-209ENST00000529757 USP6P35125 1406 aa22.37■■□□□ 1.17
PACS1-209ENST00000529757 PMFBP1Q8TBY8 1022 aa22.36■■□□□ 1.17
PACS1-209ENST00000529757 NRKQ7Z2Y5 1582 aa22.36■■□□□ 1.17
PACS1-209ENST00000529757 TNNT2P45379 298 aaPredicted RBP22.36■■□□□ 1.17
PACS1-209ENST00000529757 NGDNQ8NEJ9 315 aaKnown RBP22.36■■□□□ 1.17
PACS1-209ENST00000529757 C19orf44Q9H6X5 657 aa22.36■■□□□ 1.17
PACS1-209ENST00000529757 DMRT2Q9Y5R5 561 aa22.36■■□□□ 1.17
PACS1-209ENST00000529757 TTC21BQ7Z4L5 1316 aa22.33■■□□□ 1.17
PACS1-209ENST00000529757 DCCP43146 1447 aa22.33■■□□□ 1.16
PACS1-209ENST00000529757 HNRNPUQ00839 825 aaKnown RBP eCLIP22.32■■□□□ 1.16
PACS1-209ENST00000529757 NME9Q86XW9 330 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms