RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.18■□□□□ 0.66
SMCO4-205ENST00000529714 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
SMCO4-205ENST00000529714 NALCNQ8IZF0 1738 aa19.17■□□□□ 0.66
SMCO4-205ENST00000529714 XIRP1Q702N8 1843 aaKnown RBP19.17■□□□□ 0.66
SMCO4-205ENST00000529714 TESK2Q96S53 571 aa19.17■□□□□ 0.66
SMCO4-205ENST00000529714 TMEM94Q12767 1356 aa19.17■□□□□ 0.66
SMCO4-205ENST00000529714 CDC42BPGQ6DT37 1551 aa19.15■□□□□ 0.66
SMCO4-205ENST00000529714 SAFB2Q14151 953 aaKnown RBP eCLIP19.14■□□□□ 0.65
SMCO4-205ENST00000529714 DCCP43146 1447 aa19.13■□□□□ 0.65
SMCO4-205ENST00000529714 TULP4Q9NRJ4 1543 aa19.11■□□□□ 0.65
SMCO4-205ENST00000529714 MINK1Q8N4C8 1332 aaPredicted RBP19.11■□□□□ 0.65
SMCO4-205ENST00000529714 C19orf44Q9H6X5 657 aa19.11■□□□□ 0.65
SMCO4-205ENST00000529714 EVC2Q86UK5 1308 aa19.1■□□□□ 0.65
SMCO4-205ENST00000529714 IQSEC2Q5JU85 1478 aa19.09■□□□□ 0.65
SMCO4-205ENST00000529714 MSH6P52701 1360 aa19.09■□□□□ 0.65
SMCO4-205ENST00000529714 TMF1P82094 1093 aa19.09■□□□□ 0.65
SMCO4-205ENST00000529714 C14orf37Q86TY3 774 aa19.09■□□□□ 0.65
SMCO4-205ENST00000529714 RBM33Q96EV2 1170 aaKnown RBP19.09■□□□□ 0.65
SMCO4-205ENST00000529714 FMN2Q9NZ56 1722 aa19.08■□□□□ 0.65
SMCO4-205ENST00000529714 WASLO00401 505 aaPredicted RBP19.08■□□□□ 0.64
SMCO4-205ENST00000529714 PUS7Q96PZ0 661 aaKnown RBP19.08■□□□□ 0.64
SMCO4-205ENST00000529714 CDCA8Q53HL2 280 aa19.07■□□□□ 0.64
SMCO4-205ENST00000529714 HIRIP3Q9BW71 556 aaPredicted RBP19.07■□□□□ 0.64
SMCO4-205ENST00000529714 DISP3Q9P2K9 1392 aa19.06■□□□□ 0.64
SMCO4-205ENST00000529714 ANKARQ7Z5J8 1434 aa19.05■□□□□ 0.64
SMCO4-205ENST00000529714 CADPS2Q86UW7 1296 aa19.04■□□□□ 0.64
SMCO4-205ENST00000529714 CDK19Q9BWU1 502 aa19.04■□□□□ 0.64
SMCO4-205ENST00000529714 ATF3P18847 181 aa19.03■□□□□ 0.64
SMCO4-205ENST00000529714 ATAD2Q6PL18 1390 aa19.02■□□□□ 0.64
SMCO4-205ENST00000529714 ATP7BP35670 1465 aa19.02■□□□□ 0.63
SMCO4-205ENST00000529714 USP32Q8NFA0 1604 aa19.01■□□□□ 0.63
SMCO4-205ENST00000529714 ITSN1Q15811 1721 aa19.01■□□□□ 0.63
SMCO4-205ENST00000529714 SRPK2P78362 688 aaKnown RBP19.01■□□□□ 0.63
SMCO4-205ENST00000529714 TOPAZ1Q8N9V7 1692 aa19■□□□□ 0.63
SMCO4-205ENST00000529714 MST1RQ04912 1400 aa19■□□□□ 0.63
SMCO4-205ENST00000529714 CCDC7Q96M83 1385 aa18.99■□□□□ 0.63
SMCO4-205ENST00000529714 C11orf95C9JLR9 678 aaPredicted RBP18.99■□□□□ 0.63
SMCO4-205ENST00000529714 CERKQ8TCT0 537 aa18.99■□□□□ 0.63
SMCO4-205ENST00000529714 CABP2Q9NPB3 220 aa18.99■□□□□ 0.63
SMCO4-205ENST00000529714 KIF7Q2M1P5 1343 aa18.99■□□□□ 0.63
SMCO4-205ENST00000529714 NINLQ9Y2I6 1382 aa18.98■□□□□ 0.63
SMCO4-205ENST00000529714 ZNF316A6NFI3 1004 aaPredicted RBP18.98■□□□□ 0.63
SMCO4-205ENST00000529714 PRR36Q9H6K5 1346 aa18.98■□□□□ 0.63
SMCO4-205ENST00000529714 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
SMCO4-205ENST00000529714 NUDT16Q96DE0 195 aaKnown RBP18.97■□□□□ 0.63
SMCO4-205ENST00000529714 CCDC61Q9Y6R9 512 aa18.97■□□□□ 0.63
SMCO4-205ENST00000529714 WASHC2AQ641Q2 1341 aa18.97■□□□□ 0.63
SMCO4-205ENST00000529714 RGPD8O14715 1765 aaPredicted RBP18.96■□□□□ 0.63
SMCO4-205ENST00000529714 MYOM1P52179 1685 aa18.96■□□□□ 0.63
SMCO4-205ENST00000529714 KIF1AQ12756 1690 aa18.94■□□□□ 0.62
SMCO4-205ENST00000529714 PPIP5K1Q6PFW1 1433 aa18.93■□□□□ 0.62
SMCO4-205ENST00000529714 SLAIN2Q9P270 581 aa18.93■□□□□ 0.62
SMCO4-205ENST00000529714 NUTM2FA1L443 756 aa18.92■□□□□ 0.62
SMCO4-205ENST00000529714 PLEKHG3A1L390 1219 aa18.91■□□□□ 0.62
SMCO4-205ENST00000529714 TOM1O60784 492 aa18.91■□□□□ 0.62
SMCO4-205ENST00000529714 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
SMCO4-205ENST00000529714 CABP1Q9NZU7 370 aa18.89■□□□□ 0.61
SMCO4-205ENST00000529714 POLR3AO14802 1390 aaPredicted RBP18.89■□□□□ 0.61
SMCO4-205ENST00000529714 ESCO1Q5FWF5 840 aa18.88■□□□□ 0.61
SMCO4-205ENST00000529714 TMC1Q8TDI8 760 aa18.88■□□□□ 0.61
SMCO4-205ENST00000529714 PHF8Q9UPP1 1060 aa18.88■□□□□ 0.61
SMCO4-205ENST00000529714 AKAP12Q02952 1782 aa18.88■□□□□ 0.61
SMCO4-205ENST00000529714 CPSF1Q10570 1443 aaKnown RBP18.87■□□□□ 0.61
SMCO4-205ENST00000529714 ANKRD36BQ8N2N9 1353 aa18.87■□□□□ 0.61
SMCO4-205ENST00000529714 ORAI2Q96SN7 254 aa18.87■□□□□ 0.61
SMCO4-205ENST00000529714 SLC12A5Q9H2X9 1139 aa18.87■□□□□ 0.61
SMCO4-205ENST00000529714 CD163L1Q9NR16 1453 aa18.87■□□□□ 0.61
SMCO4-205ENST00000529714 TERF2IPQ9NYB0 399 aa18.87■□□□□ 0.61
SMCO4-205ENST00000529714 UBAP1LF5GYI3 381 aa18.86■□□□□ 0.61
SMCO4-205ENST00000529714 BRINP3Q76B58 766 aa18.86■□□□□ 0.61
SMCO4-205ENST00000529714 MON2Q7Z3U7 1717 aa18.86■□□□□ 0.61
SMCO4-205ENST00000529714 ROBO1Q9Y6N7 1651 aa18.85■□□□□ 0.61
SMCO4-205ENST00000529714 ACEP12821 1306 aa18.84■□□□□ 0.61
SMCO4-205ENST00000529714 HDGFL2Q7Z4V5 671 aaPredicted RBP18.84■□□□□ 0.61
SMCO4-205ENST00000529714 ZNF692Q9BU19 519 aaPredicted RBP18.84■□□□□ 0.61
SMCO4-205ENST00000529714 NHSL1Q5SYE7 1610 aa18.84■□□□□ 0.61
SMCO4-205ENST00000529714 A0A1W2PP64 1363 aa18.83■□□□□ 0.61
SMCO4-205ENST00000529714 BRD4O60885 1362 aaPredicted RBP18.83■□□□□ 0.61
SMCO4-205ENST00000529714 NGDNQ8NEJ9 315 aaKnown RBP18.83■□□□□ 0.6
SMCO4-205ENST00000529714 PMFBP1Q8TBY8 1022 aa18.83■□□□□ 0.6
SMCO4-205ENST00000529714 NPHP3Q7Z494 1330 aa18.82■□□□□ 0.6
SMCO4-205ENST00000529714 USP6P35125 1406 aa18.81■□□□□ 0.6
SMCO4-205ENST00000529714 AHDC1Q5TGY3 1603 aaPredicted RBP18.81■□□□□ 0.6
SMCO4-205ENST00000529714 NRKQ7Z2Y5 1582 aa18.81■□□□□ 0.6
SMCO4-205ENST00000529714 KTN1Q86UP2 1357 aaKnown RBP18.81■□□□□ 0.6
SMCO4-205ENST00000529714 PANK3Q9H999 370 aa18.8■□□□□ 0.6
SMCO4-205ENST00000529714 EDC4Q6P2E9 1401 aaKnown RBP18.8■□□□□ 0.6
SMCO4-205ENST00000529714 FOXO3O43524 673 aa18.79■□□□□ 0.6
SMCO4-205ENST00000529714 SSH2Q76I76 1423 aa18.79■□□□□ 0.6
SMCO4-205ENST00000529714 PXDNQ92626 1479 aa18.78■□□□□ 0.6
SMCO4-205ENST00000529714 TRPM3Q9HCF6 1732 aaPredicted RBP18.77■□□□□ 0.6
SMCO4-205ENST00000529714 PSME1Q06323 249 aa18.77■□□□□ 0.6
SMCO4-205ENST00000529714 DDX10Q13206 875 aaKnown RBP18.77■□□□□ 0.6
SMCO4-205ENST00000529714 SOS2Q07890 1332 aaPredicted RBP18.76■□□□□ 0.59
SMCO4-205ENST00000529714 PIP4K2BP78356 416 aa18.76■□□□□ 0.59
SMCO4-205ENST00000529714 CARD14Q9BXL6 1004 aa18.76■□□□□ 0.59
SMCO4-205ENST00000529714 NSD3Q9BZ95 1437 aa18.75■□□□□ 0.59
SMCO4-205ENST00000529714 KRT28Q7Z3Y7 464 aa18.75■□□□□ 0.59
SMCO4-205ENST00000529714 SBNO1A3KN83 1393 aa18.75■□□□□ 0.59
SMCO4-205ENST00000529714 TTC21AQ8NDW8 1320 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms