RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 NGLY1Q96IV0 654 aa13.77□□□□□ -0.21
VPS11-203ENST00000529545 SETBP1Q9Y6X0 1596 aa13.77□□□□□ -0.21
VPS11-203ENST00000529545 ADGRL3Q9HAR2 1447 aa13.75□□□□□ -0.21
VPS11-203ENST00000529545 PNPLA6Q8IY17 1366 aa13.75□□□□□ -0.21
VPS11-203ENST00000529545 NRXN3Q9Y4C0 1643 aa13.75□□□□□ -0.21
VPS11-203ENST00000529545 RGS12O14924 1447 aa13.74□□□□□ -0.21
VPS11-203ENST00000529545 METP08581 1390 aa13.74□□□□□ -0.21
VPS11-203ENST00000529545 SPHKAPQ2M3C7 1700 aa13.74□□□□□ -0.21
VPS11-203ENST00000529545 ADAMTS2O95450 1211 aa13.74□□□□□ -0.21
VPS11-203ENST00000529545 ITGAEP38570 1179 aa13.74□□□□□ -0.21
VPS11-203ENST00000529545 DDX17Q92841 729 aaKnown RBP13.74□□□□□ -0.21
VPS11-203ENST00000529545 ATAD2Q6PL18 1390 aa13.72□□□□□ -0.21
VPS11-203ENST00000529545 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
VPS11-203ENST00000529545 NALCNQ8IZF0 1738 aa13.71□□□□□ -0.21
VPS11-203ENST00000529545 USP21Q9UK80 565 aa13.7□□□□□ -0.22
VPS11-203ENST00000529545 TRPC5Q9UL62 973 aaPredicted RBP13.7□□□□□ -0.22
VPS11-203ENST00000529545 C1orf167Q5SNV9 1468 aa13.69□□□□□ -0.22
VPS11-203ENST00000529545 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
VPS11-203ENST00000529545 SOS2Q07890 1332 aaPredicted RBP13.67□□□□□ -0.22
VPS11-203ENST00000529545 KIF1BO60333 1816 aa13.67□□□□□ -0.22
VPS11-203ENST00000529545 PTCH1Q13635 1447 aa13.67□□□□□ -0.22
VPS11-203ENST00000529545 VGFO15240 615 aaPredicted RBP13.67□□□□□ -0.22
VPS11-203ENST00000529545 NEXMIFQ5QGS0 1516 aa13.67□□□□□ -0.22
VPS11-203ENST00000529545 LAMC1P11047 1609 aa13.66□□□□□ -0.22
VPS11-203ENST00000529545 ORAI2Q96SN7 254 aa13.66□□□□□ -0.22
VPS11-203ENST00000529545 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
VPS11-203ENST00000529545 FNBP4Q8N3X1 1017 aaPredicted RBP13.65□□□□□ -0.22
VPS11-203ENST00000529545 CCDC125Q86Z20 511 aa13.64□□□□□ -0.23
VPS11-203ENST00000529545 ROBO2Q9HCK4 1378 aa13.63□□□□□ -0.23
VPS11-203ENST00000529545 NPHP3Q7Z494 1330 aa13.63□□□□□ -0.23
VPS11-203ENST00000529545 ESCO1Q5FWF5 840 aa13.62□□□□□ -0.23
VPS11-203ENST00000529545 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
VPS11-203ENST00000529545 ATRNO75882 1429 aa13.62□□□□□ -0.23
VPS11-203ENST00000529545 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
VPS11-203ENST00000529545 COL22A1Q8NFW1 1626 aaPredicted RBP13.61□□□□□ -0.23
VPS11-203ENST00000529545 LRPPRCP42704 1394 aaKnown RBP13.59□□□□□ -0.23
VPS11-203ENST00000529545 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.24
VPS11-203ENST00000529545 GJD4Q96KN9 370 aaPredicted RBP13.58□□□□□ -0.24
VPS11-203ENST00000529545 MARF1Q9Y4F3 1742 aaKnown RBP13.58□□□□□ -0.24
VPS11-203ENST00000529545 MYOM2P54296 1465 aa13.57□□□□□ -0.24
VPS11-203ENST00000529545 FOXO3O43524 673 aa13.57□□□□□ -0.24
VPS11-203ENST00000529545 BCL9LQ86UU0 1499 aa13.56□□□□□ -0.24
VPS11-203ENST00000529545 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
VPS11-203ENST00000529545 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
VPS11-203ENST00000529545 CDC42BPGQ6DT37 1551 aa13.56□□□□□ -0.24
VPS11-203ENST00000529545 PPLO60437 1756 aa13.55□□□□□ -0.24
VPS11-203ENST00000529545 PXDNQ92626 1479 aa13.55□□□□□ -0.24
VPS11-203ENST00000529545 SF3B2Q13435 895 aaKnown RBP13.54□□□□□ -0.24
VPS11-203ENST00000529545 NUTM2FA1L443 756 aa13.53□□□□□ -0.24
VPS11-203ENST00000529545 HAP1P54257 671 aaPredicted RBP13.53□□□□□ -0.24
VPS11-203ENST00000529545 UNC5CLQ8IV45 518 aa13.53□□□□□ -0.24
VPS11-203ENST00000529545 NAIPQ13075 1403 aa13.53□□□□□ -0.24
VPS11-203ENST00000529545 STK26Q9P289 416 aa13.52□□□□□ -0.25
VPS11-203ENST00000529545 BLMP54132 1417 aaPredicted RBP13.52□□□□□ -0.25
VPS11-203ENST00000529545 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.52□□□□□ -0.25
VPS11-203ENST00000529545 RALGAPBQ86X10 1494 aa13.5□□□□□ -0.25
VPS11-203ENST00000529545 WAPLQ7Z5K2 1190 aa13.5□□□□□ -0.25
VPS11-203ENST00000529545 CCDC144AA2RUR9 1427 aa13.49□□□□□ -0.25
VPS11-203ENST00000529545 SPATA31A3Q5VYP0 1347 aa13.49□□□□□ -0.25
VPS11-203ENST00000529545 KIF1AQ12756 1690 aa13.49□□□□□ -0.25
VPS11-203ENST00000529545 SLIT2O94813 1529 aa13.49□□□□□ -0.25
VPS11-203ENST00000529545 RRBP1Q9P2E9 1410 aaKnown RBP13.48□□□□□ -0.25
VPS11-203ENST00000529545 SRCAPQ6ZRS2 3230 aa13.48□□□□□ -0.25
VPS11-203ENST00000529545 PSME1Q06323 249 aa13.48□□□□□ -0.25
VPS11-203ENST00000529545 RGL3Q3MIN7 710 aa13.48□□□□□ -0.25
VPS11-203ENST00000529545 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
VPS11-203ENST00000529545 CCDC9Q9Y3X0 531 aaKnown RBP13.48□□□□□ -0.25
VPS11-203ENST00000529545 GLI3P10071 1580 aa13.48□□□□□ -0.25
VPS11-203ENST00000529545 TECPR2O15040 1411 aa13.47□□□□□ -0.25
VPS11-203ENST00000529545 ADGRF5Q8IZF2 1346 aa13.47□□□□□ -0.25
VPS11-203ENST00000529545 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
VPS11-203ENST00000529545 EP400Q96L91 3159 aa13.47□□□□□ -0.25
VPS11-203ENST00000529545 USP32Q8NFA0 1604 aa13.46□□□□□ -0.25
VPS11-203ENST00000529545 ABCC11Q96J66 1382 aa13.46□□□□□ -0.25
VPS11-203ENST00000529545 ANKRD30BQ9BXX2 1392 aa13.46□□□□□ -0.25
VPS11-203ENST00000529545 BRWD3Q6RI45 1802 aa13.46□□□□□ -0.25
VPS11-203ENST00000529545 TMEM132EQ6IEE7 984 aa13.46□□□□□ -0.25
VPS11-203ENST00000529545 DEFB132Q7Z7B7 95 aa13.46□□□□□ -0.25
VPS11-203ENST00000529545 FMN2Q9NZ56 1722 aa13.46□□□□□ -0.25
VPS11-203ENST00000529545 KNDC1Q76NI1 1749 aa13.45□□□□□ -0.26
VPS11-203ENST00000529545 VPS72Q15906 364 aa13.45□□□□□ -0.26
VPS11-203ENST00000529545 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
VPS11-203ENST00000529545 A0A0G2JS52 829 aa13.44□□□□□ -0.26
VPS11-203ENST00000529545 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
VPS11-203ENST00000529545 MYT1Q01538 1121 aa13.44□□□□□ -0.26
VPS11-203ENST00000529545 KRT27Q7Z3Y8 459 aa13.44□□□□□ -0.26
VPS11-203ENST00000529545 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
VPS11-203ENST00000529545 PLEKHH1Q9ULM0 1364 aa13.44□□□□□ -0.26
VPS11-203ENST00000529545 TNS3Q68CZ2 1445 aa13.43□□□□□ -0.26
VPS11-203ENST00000529545 NWD2Q9ULI1 1742 aa13.42□□□□□ -0.26
VPS11-203ENST00000529545 YTHDC2Q9H6S0 1430 aaKnown RBP13.42□□□□□ -0.26
VPS11-203ENST00000529545 ONECUT3O60422 494 aaPredicted RBP13.42□□□□□ -0.26
VPS11-203ENST00000529545 BAG6P46379 1132 aa13.42□□□□□ -0.26
VPS11-203ENST00000529545 CABLES1Q8TDN4 633 aa13.42□□□□□ -0.26
VPS11-203ENST00000529545 SIRT1Q96EB6 747 aa13.42□□□□□ -0.26
VPS11-203ENST00000529545 ARHGEF10O15013 1369 aa13.42□□□□□ -0.26
VPS11-203ENST00000529545 PLCH1Q4KWH8 1693 aa13.41□□□□□ -0.26
VPS11-203ENST00000529545 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
VPS11-203ENST00000529545 SBNO1A3KN83 1393 aa13.41□□□□□ -0.26
VPS11-203ENST00000529545 IFT172Q9UG01 1749 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms