RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 TECPR2O15040 1411 aa26.05■■□□□ 1.76
CMTM1-213ENST00000529506 WAPLQ7Z5K2 1190 aa26.04■■□□□ 1.76
CMTM1-213ENST00000529506 DDX17Q92841 729 aaKnown RBP26.04■■□□□ 1.76
CMTM1-213ENST00000529506 STAC3Q96MF2 364 aa26.04■■□□□ 1.76
CMTM1-213ENST00000529506 DHX57Q6P158 1386 aaKnown RBP26.04■■□□□ 1.76
CMTM1-213ENST00000529506 ESCO1Q5FWF5 840 aa26.03■■□□□ 1.76
CMTM1-213ENST00000529506 LRP6O75581 1613 aa26.03■■□□□ 1.76
CMTM1-213ENST00000529506 SOS2Q07890 1332 aaPredicted RBP26.02■■□□□ 1.76
CMTM1-213ENST00000529506 YTHDC2Q9H6S0 1430 aaKnown RBP26.01■■□□□ 1.75
CMTM1-213ENST00000529506 PNPLA6Q8IY17 1366 aa25.99■■□□□ 1.75
CMTM1-213ENST00000529506 NPHP3Q7Z494 1330 aa25.99■■□□□ 1.75
CMTM1-213ENST00000529506 CFAP70Q5T0N1 1121 aa25.99■■□□□ 1.75
CMTM1-213ENST00000529506 MYOM2P54296 1465 aa25.98■■□□□ 1.75
CMTM1-213ENST00000529506 CDC42BPGQ6DT37 1551 aa25.98■■□□□ 1.75
CMTM1-213ENST00000529506 LAMC1P11047 1609 aa25.97■■□□□ 1.75
CMTM1-213ENST00000529506 NRXN1Q9ULB1 1477 aa25.97■■□□□ 1.75
CMTM1-213ENST00000529506 RXRBP28702 533 aa25.96■■□□□ 1.75
CMTM1-213ENST00000529506 KNDC1Q76NI1 1749 aa25.95■■□□□ 1.74
CMTM1-213ENST00000529506 AFF2P51816 1311 aa25.93■■□□□ 1.74
CMTM1-213ENST00000529506 FOXO3O43524 673 aa25.93■■□□□ 1.74
CMTM1-213ENST00000529506 DCAF11Q8TEB1 546 aa25.93■■□□□ 1.74
CMTM1-213ENST00000529506 NGLY1Q96IV0 654 aa25.92■■□□□ 1.74
CMTM1-213ENST00000529506 C8orf37Q96NL8 207 aa25.92■■□□□ 1.74
CMTM1-213ENST00000529506 POGKQ9P215 609 aa25.92■■□□□ 1.74
CMTM1-213ENST00000529506 KDM2AQ9Y2K7 1162 aa25.92■■□□□ 1.74
CMTM1-213ENST00000529506 NUTM2FA1L443 756 aa25.91■■□□□ 1.74
CMTM1-213ENST00000529506 PLEKHH1Q9ULM0 1364 aa25.91■■□□□ 1.74
CMTM1-213ENST00000529506 ADAMTS2O95450 1211 aa25.89■■□□□ 1.74
CMTM1-213ENST00000529506 PRAM1Q96QH2 718 aa25.88■■□□□ 1.73
CMTM1-213ENST00000529506 QTRT2Q9H974 415 aaKnown RBP25.87■■□□□ 1.73
CMTM1-213ENST00000529506 RBM6P78332 1123 aaKnown RBP25.84■■□□□ 1.73
CMTM1-213ENST00000529506 PSME1Q06323 249 aa25.84■■□□□ 1.73
CMTM1-213ENST00000529506 SAFB2Q14151 953 aaKnown RBP eCLIP25.83■■□□□ 1.73
CMTM1-213ENST00000529506 PHF8Q9UPP1 1060 aa25.82■■□□□ 1.72
CMTM1-213ENST00000529506 TRAK1Q9UPV9 953 aa25.82■■□□□ 1.72
CMTM1-213ENST00000529506 FMN2Q9NZ56 1722 aa25.82■■□□□ 1.72
CMTM1-213ENST00000529506 DLC1Q96QB1 1528 aa25.82■■□□□ 1.72
CMTM1-213ENST00000529506 CDK12Q9NYV4 1490 aaPredicted RBP25.81■■□□□ 1.72
CMTM1-213ENST00000529506 XPCQ01831 940 aaPredicted RBP25.81■■□□□ 1.72
CMTM1-213ENST00000529506 KRT28Q7Z3Y7 464 aa25.81■■□□□ 1.72
CMTM1-213ENST00000529506 PXDNQ92626 1479 aa25.8■■□□□ 1.72
CMTM1-213ENST00000529506 USP21Q9UK80 565 aa25.8■■□□□ 1.72
CMTM1-213ENST00000529506 FNBP4Q8N3X1 1017 aaPredicted RBP25.79■■□□□ 1.72
CMTM1-213ENST00000529506 COL22A1Q8NFW1 1626 aaPredicted RBP25.78■■□□□ 1.72
CMTM1-213ENST00000529506 KIF1AQ12756 1690 aa25.78■■□□□ 1.72
CMTM1-213ENST00000529506 TRPC5Q9UL62 973 aaPredicted RBP25.78■■□□□ 1.72
CMTM1-213ENST00000529506 SPATA31A3Q5VYP0 1347 aa25.77■■□□□ 1.72
CMTM1-213ENST00000529506 EIF3AQ14152 1382 aaKnown RBP25.76■■□□□ 1.71
CMTM1-213ENST00000529506 ADGRB1O14514 1584 aa25.74■■□□□ 1.71
CMTM1-213ENST00000529506 ANKARQ7Z5J8 1434 aa25.73■■□□□ 1.71
CMTM1-213ENST00000529506 MINK1Q8N4C8 1332 aaPredicted RBP25.71■■□□□ 1.71
CMTM1-213ENST00000529506 UPF1Q92900 1129 aaKnown RBP eCLIP25.71■■□□□ 1.71
CMTM1-213ENST00000529506 RGPD8O14715 1765 aaPredicted RBP25.71■■□□□ 1.71
CMTM1-213ENST00000529506 WASLO00401 505 aaPredicted RBP25.7■■□□□ 1.7
CMTM1-213ENST00000529506 HAP1P54257 671 aaPredicted RBP25.7■■□□□ 1.7
CMTM1-213ENST00000529506 HIRIP3Q9BW71 556 aaPredicted RBP25.69■■□□□ 1.7
CMTM1-213ENST00000529506 SBNO1A3KN83 1393 aa25.69■■□□□ 1.7
CMTM1-213ENST00000529506 PMFBP1Q8TBY8 1022 aa25.68■■□□□ 1.7
CMTM1-213ENST00000529506 LMOD2Q6P5Q4 547 aa25.67■■□□□ 1.7
CMTM1-213ENST00000529506 ADGRB2O60241 1585 aa25.66■■□□□ 1.7
CMTM1-213ENST00000529506 ARHGEF10O15013 1369 aa25.66■■□□□ 1.7
CMTM1-213ENST00000529506 GPRASP1Q5JY77 1395 aa25.66■■□□□ 1.7
CMTM1-213ENST00000529506 TNS3Q68CZ2 1445 aa25.65■■□□□ 1.7
CMTM1-213ENST00000529506 MARF1Q9Y4F3 1742 aaKnown RBP25.64■■□□□ 1.7
CMTM1-213ENST00000529506 ATRNO75882 1429 aa25.63■■□□□ 1.69
CMTM1-213ENST00000529506 UNC5CLQ8IV45 518 aa25.62■■□□□ 1.69
CMTM1-213ENST00000529506 NGDNQ8NEJ9 315 aaKnown RBP25.62■■□□□ 1.69
CMTM1-213ENST00000529506 RGS12O14924 1447 aa25.61■■□□□ 1.69
CMTM1-213ENST00000529506 BCL9LQ86UU0 1499 aa25.6■■□□□ 1.69
CMTM1-213ENST00000529506 GJD4Q96KN9 370 aaPredicted RBP25.6■■□□□ 1.69
CMTM1-213ENST00000529506 KIAA1210Q9ULL0 1709 aa25.59■■□□□ 1.69
CMTM1-213ENST00000529506 TULP4Q9NRJ4 1543 aa25.58■■□□□ 1.69
CMTM1-213ENST00000529506 NUDT16Q96DE0 195 aaKnown RBP25.58■■□□□ 1.69
CMTM1-213ENST00000529506 USP32Q8NFA0 1604 aa25.57■■□□□ 1.68
CMTM1-213ENST00000529506 CABLES1Q8TDN4 633 aa25.57■■□□□ 1.68
CMTM1-213ENST00000529506 PRR36Q9H6K5 1346 aa25.57■■□□□ 1.68
CMTM1-213ENST00000529506 CDK19Q9BWU1 502 aa25.56■■□□□ 1.68
CMTM1-213ENST00000529506 ATAD2Q6PL18 1390 aa25.56■■□□□ 1.68
CMTM1-213ENST00000529506 SLIT2O94813 1529 aa25.54■■□□□ 1.68
CMTM1-213ENST00000529506 NBPF1Q3BBV0 1214 aa25.54■■□□□ 1.68
CMTM1-213ENST00000529506 ARHGEF28Q8N1W1 1705 aaKnown RBP25.54■■□□□ 1.68
CMTM1-213ENST00000529506 PAK3O75914 559 aaPredicted RBP25.53■■□□□ 1.68
CMTM1-213ENST00000529506 PLEKHG5O94827 1062 aa25.53■■□□□ 1.68
CMTM1-213ENST00000529506 CCDC61Q9Y6R9 512 aa25.53■■□□□ 1.68
CMTM1-213ENST00000529506 L3MBTL2Q969R5 705 aa25.52■■□□□ 1.68
CMTM1-213ENST00000529506 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.5■■□□□ 1.67
CMTM1-213ENST00000529506 VPS72Q15906 364 aa25.49■■□□□ 1.67
CMTM1-213ENST00000529506 CCDC125Q86Z20 511 aa25.49■■□□□ 1.67
CMTM1-213ENST00000529506 CENPJQ9HC77 1338 aaPredicted RBP25.48■■□□□ 1.67
CMTM1-213ENST00000529506 FAM83GA6ND36 823 aa25.48■■□□□ 1.67
CMTM1-213ENST00000529506 ITSN1Q15811 1721 aa25.48■■□□□ 1.67
CMTM1-213ENST00000529506 NEUROD1Q13562 356 aa25.47■■□□□ 1.67
CMTM1-213ENST00000529506 SIN3AQ96ST3 1273 aa25.47■■□□□ 1.67
CMTM1-213ENST00000529506 CCDC9Q9Y3X0 531 aaKnown RBP25.47■■□□□ 1.67
CMTM1-213ENST00000529506 PLEKHG3A1L390 1219 aa25.46■■□□□ 1.67
CMTM1-213ENST00000529506 NBPF8Q3BBV2 869 aa25.45■■□□□ 1.66
CMTM1-213ENST00000529506 TRPM3Q9HCF6 1732 aaPredicted RBP25.45■■□□□ 1.66
CMTM1-213ENST00000529506 ATP7BP35670 1465 aa25.45■■□□□ 1.66
CMTM1-213ENST00000529506 SRPK2P78362 688 aaKnown RBP25.44■■□□□ 1.66
CMTM1-213ENST00000529506 RALGAPBQ86X10 1494 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms