RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-208ENST00000529505 DCAF11Q8TEB1 546 aa30.49■■■□□ 2.47
SMIM19-208ENST00000529505 PNPLA6Q8IY17 1366 aa30.49■■■□□ 2.47
SMIM19-208ENST00000529505 NRXN1Q9ULB1 1477 aa30.49■■■□□ 2.47
SMIM19-208ENST00000529505 KNDC1Q76NI1 1749 aa30.47■■■□□ 2.47
SMIM19-208ENST00000529505 LRPPRCP42704 1394 aaKnown RBP30.46■■■□□ 2.47
SMIM19-208ENST00000529505 NUTM2BA6NNL0 878 aaPredicted RBP30.45■■■□□ 2.47
SMIM19-208ENST00000529505 NUTM2EB1AL46 878 aaPredicted RBP30.45■■■□□ 2.47
SMIM19-208ENST00000529505 NUTM2AQ8IVF1 878 aaPredicted RBP30.45■■■□□ 2.47
SMIM19-208ENST00000529505 ORAI2Q96SN7 254 aa30.45■■■□□ 2.47
SMIM19-208ENST00000529505 SOS2Q07890 1332 aaPredicted RBP30.44■■■□□ 2.46
SMIM19-208ENST00000529505 ABCC11Q96J66 1382 aa30.43■■■□□ 2.46
SMIM19-208ENST00000529505 KDM2AQ9Y2K7 1162 aa30.43■■■□□ 2.46
SMIM19-208ENST00000529505 PCGF6Q9BYE7 350 aa30.42■■■□□ 2.46
SMIM19-208ENST00000529505 CFAP70Q5T0N1 1121 aa30.39■■■□□ 2.46
SMIM19-208ENST00000529505 SIN3AQ96ST3 1273 aa30.39■■■□□ 2.46
SMIM19-208ENST00000529505 STK26Q9P289 416 aa30.38■■■□□ 2.45
SMIM19-208ENST00000529505 TMEM132EQ6IEE7 984 aa30.37■■■□□ 2.45
SMIM19-208ENST00000529505 AFF2P51816 1311 aa30.37■■■□□ 2.45
SMIM19-208ENST00000529505 YTHDC2Q9H6S0 1430 aaKnown RBP30.37■■■□□ 2.45
SMIM19-208ENST00000529505 WAPLQ7Z5K2 1190 aa30.36■■■□□ 2.45
SMIM19-208ENST00000529505 SIRT1Q96EB6 747 aa30.35■■■□□ 2.45
SMIM19-208ENST00000529505 PLEKHH1Q9ULM0 1364 aa30.35■■■□□ 2.45
SMIM19-208ENST00000529505 CDK12Q9NYV4 1490 aaPredicted RBP30.33■■■□□ 2.45
SMIM19-208ENST00000529505 COL22A1Q8NFW1 1626 aaPredicted RBP30.33■■■□□ 2.45
SMIM19-208ENST00000529505 NEUROD1Q13562 356 aa30.32■■■□□ 2.44
SMIM19-208ENST00000529505 PXDNQ92626 1479 aa30.31■■■□□ 2.44
SMIM19-208ENST00000529505 RXRBP28702 533 aa30.31■■■□□ 2.44
SMIM19-208ENST00000529505 L3MBTL2Q969R5 705 aa30.31■■■□□ 2.44
SMIM19-208ENST00000529505 FMN2Q9NZ56 1722 aa30.3■■■□□ 2.44
SMIM19-208ENST00000529505 NPHP3Q7Z494 1330 aa30.3■■■□□ 2.44
SMIM19-208ENST00000529505 ESCO1Q5FWF5 840 aa30.3■■■□□ 2.44
SMIM19-208ENST00000529505 C8orf37Q96NL8 207 aa30.29■■■□□ 2.44
SMIM19-208ENST00000529505 ADAMTS2O95450 1211 aa30.24■■■□□ 2.43
SMIM19-208ENST00000529505 FOXO3O43524 673 aa30.23■■■□□ 2.43
SMIM19-208ENST00000529505 NUTM2FA1L443 756 aa30.22■■■□□ 2.43
SMIM19-208ENST00000529505 KIF1AQ12756 1690 aa30.22■■■□□ 2.43
SMIM19-208ENST00000529505 NGLY1Q96IV0 654 aa30.2■■■□□ 2.43
SMIM19-208ENST00000529505 QTRT2Q9H974 415 aaKnown RBP30.2■■■□□ 2.43
SMIM19-208ENST00000529505 DLC1Q96QB1 1528 aa30.2■■■□□ 2.42
SMIM19-208ENST00000529505 ADGRB1O14514 1584 aa30.2■■■□□ 2.42
SMIM19-208ENST00000529505 RBM6P78332 1123 aaKnown RBP30.18■■■□□ 2.42
SMIM19-208ENST00000529505 XPCQ01831 940 aaPredicted RBP30.18■■■□□ 2.42
SMIM19-208ENST00000529505 UPF1Q92900 1129 aaKnown RBP eCLIP30.18■■■□□ 2.42
SMIM19-208ENST00000529505 RGS12O14924 1447 aa30.18■■■□□ 2.42
SMIM19-208ENST00000529505 CLSPNQ9HAW4 1339 aa30.17■■■□□ 2.42
SMIM19-208ENST00000529505 FNBP4Q8N3X1 1017 aaPredicted RBP30.16■■■□□ 2.42
SMIM19-208ENST00000529505 MARF1Q9Y4F3 1742 aaKnown RBP30.16■■■□□ 2.42
SMIM19-208ENST00000529505 RGPD8O14715 1765 aaPredicted RBP30.15■■■□□ 2.42
SMIM19-208ENST00000529505 PRAM1Q96QH2 718 aa30.13■■■□□ 2.41
SMIM19-208ENST00000529505 TRAK1Q9UPV9 953 aa30.13■■■□□ 2.41
SMIM19-208ENST00000529505 ADGRB2O60241 1585 aa30.12■■■□□ 2.41
SMIM19-208ENST00000529505 USP21Q9UK80 565 aa30.12■■■□□ 2.41
SMIM19-208ENST00000529505 KIAA1210Q9ULL0 1709 aa30.11■■■□□ 2.41
SMIM19-208ENST00000529505 POGKQ9P215 609 aa30.11■■■□□ 2.41
SMIM19-208ENST00000529505 TONSLQ96HA7 1378 aa30.11■■■□□ 2.41
SMIM19-208ENST00000529505 NBPF1Q3BBV0 1214 aa30.1■■■□□ 2.41
SMIM19-208ENST00000529505 SPATA31A3Q5VYP0 1347 aa30.1■■■□□ 2.41
SMIM19-208ENST00000529505 ATRNO75882 1429 aa30.1■■■□□ 2.41
SMIM19-208ENST00000529505 TRPC5Q9UL62 973 aaPredicted RBP30.08■■■□□ 2.41
SMIM19-208ENST00000529505 USP32Q8NFA0 1604 aa30.07■■■□□ 2.4
SMIM19-208ENST00000529505 SAFB2Q14151 953 aaKnown RBP eCLIP30.07■■■□□ 2.4
SMIM19-208ENST00000529505 ANKARQ7Z5J8 1434 aa30.06■■■□□ 2.4
SMIM19-208ENST00000529505 PHF8Q9UPP1 1060 aa30.06■■■□□ 2.4
SMIM19-208ENST00000529505 BCL9LQ86UU0 1499 aa30.06■■■□□ 2.4
SMIM19-208ENST00000529505 KRT28Q7Z3Y7 464 aa30.05■■■□□ 2.4
SMIM19-208ENST00000529505 TIMELESSQ9UNS1 1208 aa30.04■■■□□ 2.4
SMIM19-208ENST00000529505 TNS3Q68CZ2 1445 aa30.03■■■□□ 2.4
SMIM19-208ENST00000529505 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.02■■■□□ 2.4
SMIM19-208ENST00000529505 NBPF8Q3BBV2 869 aa30.01■■■□□ 2.39
SMIM19-208ENST00000529505 SBNO1A3KN83 1393 aa30■■■□□ 2.39
SMIM19-208ENST00000529505 SLIT2O94813 1529 aa29.98■■■□□ 2.39
SMIM19-208ENST00000529505 PSME1Q06323 249 aa29.97■■■□□ 2.39
SMIM19-208ENST00000529505 CCER1Q8TC90 406 aaPredicted RBP29.97■■■□□ 2.39
SMIM19-208ENST00000529505 ARHGEF28Q8N1W1 1705 aaKnown RBP29.96■■■□□ 2.39
SMIM19-208ENST00000529505 ABCA3Q99758 1704 aa29.96■■■□□ 2.39
SMIM19-208ENST00000529505 TULP4Q9NRJ4 1543 aa29.96■■■□□ 2.39
SMIM19-208ENST00000529505 ROCK2O75116 1388 aaKnown RBP29.94■■■□□ 2.38
SMIM19-208ENST00000529505 EIF3AQ14152 1382 aaKnown RBP29.94■■■□□ 2.38
SMIM19-208ENST00000529505 HIRIP3Q9BW71 556 aaPredicted RBP29.94■■■□□ 2.38
SMIM19-208ENST00000529505 MINK1Q8N4C8 1332 aaPredicted RBP29.94■■■□□ 2.38
SMIM19-208ENST00000529505 TRPM3Q9HCF6 1732 aaPredicted RBP29.93■■■□□ 2.38
SMIM19-208ENST00000529505 PRR36Q9H6K5 1346 aa29.93■■■□□ 2.38
SMIM19-208ENST00000529505 ARHGEF10O15013 1369 aa29.92■■■□□ 2.38
SMIM19-208ENST00000529505 GPRASP1Q5JY77 1395 aa29.92■■■□□ 2.38
SMIM19-208ENST00000529505 ATAD2Q6PL18 1390 aa29.92■■■□□ 2.38
SMIM19-208ENST00000529505 WASLO00401 505 aaPredicted RBP29.91■■■□□ 2.38
SMIM19-208ENST00000529505 PMFBP1Q8TBY8 1022 aa29.91■■■□□ 2.38
SMIM19-208ENST00000529505 TRPM1Q7Z4N2 1603 aa29.91■■■□□ 2.38
SMIM19-208ENST00000529505 UNC5CLQ8IV45 518 aa29.9■■■□□ 2.38
SMIM19-208ENST00000529505 GJD4Q96KN9 370 aaPredicted RBP29.9■■■□□ 2.38
SMIM19-208ENST00000529505 GLI3P10071 1580 aa29.89■■■□□ 2.38
SMIM19-208ENST00000529505 CABLES1Q8TDN4 633 aa29.88■■■□□ 2.37
SMIM19-208ENST00000529505 CENPJQ9HC77 1338 aaPredicted RBP29.88■■■□□ 2.37
SMIM19-208ENST00000529505 ALS2Q96Q42 1657 aa29.88■■■□□ 2.37
SMIM19-208ENST00000529505 NWD2Q9ULI1 1742 aa29.87■■■□□ 2.37
SMIM19-208ENST00000529505 PLCH1Q4KWH8 1693 aa29.86■■■□□ 2.37
SMIM19-208ENST00000529505 RALGAPBQ86X10 1494 aa29.86■■■□□ 2.37
SMIM19-208ENST00000529505 EP400Q96L91 3159 aa29.85■■■□□ 2.37
SMIM19-208ENST00000529505 CARD11Q9BXL7 1154 aa29.84■■■□□ 2.37
SMIM19-208ENST00000529505 ATP7BP35670 1465 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms