RNA–Protein interactions for RNA: ENST00000529273.1

ROM1-204, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 4

Gene ROM1, Length 249 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-204ENST00000529273 NRXN1Q9ULB1 1477 aa40.67■■■■■ 4.1
ROM1-204ENST00000529273 CFAP70Q5T0N1 1121 aa40.65■■■■■ 4.1
ROM1-204ENST00000529273 YTHDC2Q9H6S0 1430 aaKnown RBP40.65■■■■■ 4.1
ROM1-204ENST00000529273 NUTM2BA6NNL0 878 aaPredicted RBP40.64■■■■■ 4.1
ROM1-204ENST00000529273 NUTM2EB1AL46 878 aaPredicted RBP40.64■■■■■ 4.1
ROM1-204ENST00000529273 NUTM2AQ8IVF1 878 aaPredicted RBP40.64■■■■■ 4.1
ROM1-204ENST00000529273 PLEKHH1Q9ULM0 1364 aa40.62■■■■■ 4.09
ROM1-204ENST00000529273 CDC42BPGQ6DT37 1551 aa40.6■■■■■ 4.09
ROM1-204ENST00000529273 SIRT1Q96EB6 747 aa40.58■■■■■ 4.09
ROM1-204ENST00000529273 DHX57Q6P158 1386 aaKnown RBP40.57■■■■■ 4.08
ROM1-204ENST00000529273 KNDC1Q76NI1 1749 aa40.56■■■■■ 4.08
ROM1-204ENST00000529273 ESCO1Q5FWF5 840 aa40.56■■■■■ 4.08
ROM1-204ENST00000529273 PNPLA6Q8IY17 1366 aa40.56■■■■■ 4.08
ROM1-204ENST00000529273 SOS2Q07890 1332 aaPredicted RBP40.55■■■■■ 4.08
ROM1-204ENST00000529273 LAMC1P11047 1609 aa40.53■■■■■ 4.08
ROM1-204ENST00000529273 ZNF772Q68DY9 489 aaPredicted RBP40.52■■■■■ 4.08
ROM1-204ENST00000529273 KDM2AQ9Y2K7 1162 aa40.52■■■■■ 4.08
ROM1-204ENST00000529273 NUTM2FA1L443 756 aa40.51■■■■■ 4.08
ROM1-204ENST00000529273 DCAF11Q8TEB1 546 aa40.51■■■■■ 4.08
ROM1-204ENST00000529273 NPHP3Q7Z494 1330 aa40.45■■■■■ 4.07
ROM1-204ENST00000529273 STAC3Q96MF2 364 aa40.44■■■■■ 4.06
ROM1-204ENST00000529273 PRAM1Q96QH2 718 aa40.44■■■■■ 4.06
ROM1-204ENST00000529273 FOXO3O43524 673 aa40.43■■■■■ 4.06
ROM1-204ENST00000529273 SAFB2Q14151 953 aaKnown RBP eCLIP40.4■■■■■ 4.06
ROM1-204ENST00000529273 AFF2P51816 1311 aa40.4■■■■■ 4.06
ROM1-204ENST00000529273 C8orf37Q96NL8 207 aa40.38■■■■■ 4.05
ROM1-204ENST00000529273 POGKQ9P215 609 aa40.38■■■■■ 4.05
ROM1-204ENST00000529273 ADGRB1O14514 1584 aa40.37■■■■■ 4.05
ROM1-204ENST00000529273 XPCQ01831 940 aaPredicted RBP40.37■■■■■ 4.05
ROM1-204ENST00000529273 DLC1Q96QB1 1528 aa40.36■■■■■ 4.05
ROM1-204ENST00000529273 PXDNQ92626 1479 aa40.35■■■■■ 4.05
ROM1-204ENST00000529273 ADAMTS2O95450 1211 aa40.35■■■■■ 4.05
ROM1-204ENST00000529273 TRAK1Q9UPV9 953 aa40.35■■■■■ 4.05
ROM1-204ENST00000529273 FMN2Q9NZ56 1722 aa40.34■■■■■ 4.05
ROM1-204ENST00000529273 RXRBP28702 533 aa40.29■■■■■ 4.04
ROM1-204ENST00000529273 NGLY1Q96IV0 654 aa40.28■■■■■ 4.04
ROM1-204ENST00000529273 PHF8Q9UPP1 1060 aa40.25■■■■■ 4.03
ROM1-204ENST00000529273 COL22A1Q8NFW1 1626 aaPredicted RBP40.23■■■■■ 4.03
ROM1-204ENST00000529273 KRT28Q7Z3Y7 464 aa40.22■■■■■ 4.03
ROM1-204ENST00000529273 HIRIP3Q9BW71 556 aaPredicted RBP40.21■■■■■ 4.03
ROM1-204ENST00000529273 QTRT2Q9H974 415 aaKnown RBP40.21■■■■■ 4.03
ROM1-204ENST00000529273 KIF1AQ12756 1690 aa40.21■■■■■ 4.03
ROM1-204ENST00000529273 MINK1Q8N4C8 1332 aaPredicted RBP40.19■■■■■ 4.02
ROM1-204ENST00000529273 SPATA31A3Q5VYP0 1347 aa40.17■■■■■ 4.02
ROM1-204ENST00000529273 ANKARQ7Z5J8 1434 aa40.16■■■■■ 4.02
ROM1-204ENST00000529273 ADGRB2O60241 1585 aa40.15■■■■■ 4.02
ROM1-204ENST00000529273 PSME1Q06323 249 aa40.13■■■■■ 4.01
ROM1-204ENST00000529273 USP21Q9UK80 565 aa40.13■■■■■ 4.01
ROM1-204ENST00000529273 RBM6P78332 1123 aaKnown RBP40.12■■■■■ 4.01
ROM1-204ENST00000529273 FNBP4Q8N3X1 1017 aaPredicted RBP40.12■■■■■ 4.01
ROM1-204ENST00000529273 RGPD8O14715 1765 aaPredicted RBP40.12■■■■■ 4.01
ROM1-204ENST00000529273 CDK12Q9NYV4 1490 aaPredicted RBP40.12■■■■■ 4.01
ROM1-204ENST00000529273 WASLO00401 505 aaPredicted RBP40.1■■■■■ 4.01
ROM1-204ENST00000529273 PMFBP1Q8TBY8 1022 aa40.1■■■■■ 4.01
ROM1-204ENST00000529273 EIF3AQ14152 1382 aaKnown RBP40.08■■■■■ 4.01
ROM1-204ENST00000529273 USP32Q8NFA0 1604 aa40.07■■■■■ 4.01
ROM1-204ENST00000529273 PRR36Q9H6K5 1346 aa40.05■■■■■ 4
ROM1-204ENST00000529273 TRPC5Q9UL62 973 aaPredicted RBP40.04■■■■■ 4
ROM1-204ENST00000529273 SBNO1A3KN83 1393 aa40.04■■■■■ 4
ROM1-204ENST00000529273 TNS3Q68CZ2 1445 aa40.04■■■■■ 4
ROM1-204ENST00000529273 NBPF1Q3BBV0 1214 aa40.02■■■■■ 4
ROM1-204ENST00000529273 TULP4Q9NRJ4 1543 aa40.01■■■■■ 4
ROM1-204ENST00000529273 ARHGEF28Q8N1W1 1705 aaKnown RBP39.99■■■■□ 3.99
ROM1-204ENST00000529273 LMOD2Q6P5Q4 547 aa39.99■■■■□ 3.99
ROM1-204ENST00000529273 RGS12O14924 1447 aa39.99■■■■□ 3.99
ROM1-204ENST00000529273 SIN3AQ96ST3 1273 aa39.98■■■■□ 3.99
ROM1-204ENST00000529273 KIAA1210Q9ULL0 1709 aa39.97■■■■□ 3.99
ROM1-204ENST00000529273 UPF1Q92900 1129 aaKnown RBP eCLIP39.97■■■■□ 3.99
ROM1-204ENST00000529273 L3MBTL2Q969R5 705 aa39.97■■■■□ 3.99
ROM1-204ENST00000529273 BCL9LQ86UU0 1499 aa39.96■■■■□ 3.99
ROM1-204ENST00000529273 CABLES1Q8TDN4 633 aa39.96■■■■□ 3.99
ROM1-204ENST00000529273 ATRNO75882 1429 aa39.96■■■■□ 3.99
ROM1-204ENST00000529273 HAP1P54257 671 aaPredicted RBP39.95■■■■□ 3.99
ROM1-204ENST00000529273 ARHGEF10O15013 1369 aa39.95■■■■□ 3.99
ROM1-204ENST00000529273 PLEKHG5O94827 1062 aa39.94■■■■□ 3.98
ROM1-204ENST00000529273 GPRASP1Q5JY77 1395 aa39.94■■■■□ 3.98
ROM1-204ENST00000529273 MARF1Q9Y4F3 1742 aaKnown RBP39.91■■■■□ 3.98
ROM1-204ENST00000529273 NGDNQ8NEJ9 315 aaKnown RBP39.91■■■■□ 3.98
ROM1-204ENST00000529273 NUDT16Q96DE0 195 aaKnown RBP39.91■■■■□ 3.98
ROM1-204ENST00000529273 CDK19Q9BWU1 502 aa39.91■■■■□ 3.98
ROM1-204ENST00000529273 NEUROD1Q13562 356 aa39.9■■■■□ 3.98
ROM1-204ENST00000529273 ATP7BP35670 1465 aa39.86■■■■□ 3.97
ROM1-204ENST00000529273 UNC5CLQ8IV45 518 aa39.85■■■■□ 3.97
ROM1-204ENST00000529273 SLIT2O94813 1529 aa39.85■■■■□ 3.97
ROM1-204ENST00000529273 GJD4Q96KN9 370 aaPredicted RBP39.82■■■■□ 3.97
ROM1-204ENST00000529273 TRPM3Q9HCF6 1732 aaPredicted RBP39.81■■■■□ 3.96
ROM1-204ENST00000529273 CENPJQ9HC77 1338 aaPredicted RBP39.8■■■■□ 3.96
ROM1-204ENST00000529273 PAK3O75914 559 aaPredicted RBP39.79■■■■□ 3.96
ROM1-204ENST00000529273 CCDC61Q9Y6R9 512 aa39.77■■■■□ 3.96
ROM1-204ENST00000529273 FAM83GA6ND36 823 aa39.74■■■■□ 3.95
ROM1-204ENST00000529273 ITSN1Q15811 1721 aa39.73■■■■□ 3.95
ROM1-204ENST00000529273 ABCA3Q99758 1704 aa39.73■■■■□ 3.95
ROM1-204ENST00000529273 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.73■■■■□ 3.95
ROM1-204ENST00000529273 ALS2Q96Q42 1657 aa39.73■■■■□ 3.95
ROM1-204ENST00000529273 PLEKHG3A1L390 1219 aa39.71■■■■□ 3.95
ROM1-204ENST00000529273 ACEP12821 1306 aa39.7■■■■□ 3.95
ROM1-204ENST00000529273 RALGAPBQ86X10 1494 aa39.7■■■■□ 3.95
ROM1-204ENST00000529273 SRPK2P78362 688 aaKnown RBP39.7■■■■□ 3.95
ROM1-204ENST00000529273 POLR3AO14802 1390 aaPredicted RBP39.7■■■■□ 3.95
ROM1-204ENST00000529273 ATAD2Q6PL18 1390 aa39.7■■■■□ 3.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms