RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-217ENST00000529133 SBNO2Q9Y2G9 1366 aa16.13■□□□□ 0.17
CAPN1-217ENST00000529133 NCOA3Q9Y6Q9 1424 aa16.12■□□□□ 0.17
CAPN1-217ENST00000529133 NALCNQ8IZF0 1738 aa16.12■□□□□ 0.17
CAPN1-217ENST00000529133 ADGRB2O60241 1585 aa16.12■□□□□ 0.17
CAPN1-217ENST00000529133 TESK2Q96S53 571 aa16.11■□□□□ 0.17
CAPN1-217ENST00000529133 MINK1Q8N4C8 1332 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-217ENST00000529133 XIRP1Q702N8 1843 aaKnown RBP16.1■□□□□ 0.17
CAPN1-217ENST00000529133 C14orf37Q86TY3 774 aa16.09■□□□□ 0.17
CAPN1-217ENST00000529133 HIRIP3Q9BW71 556 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-217ENST00000529133 TULP4Q9NRJ4 1543 aa16.09■□□□□ 0.17
CAPN1-217ENST00000529133 CDC42BPGQ6DT37 1551 aa16.09■□□□□ 0.17
CAPN1-217ENST00000529133 DCCP43146 1447 aa16.06■□□□□ 0.16
CAPN1-217ENST00000529133 MSH6P52701 1360 aa16.06■□□□□ 0.16
CAPN1-217ENST00000529133 DISP3Q9P2K9 1392 aa16.05■□□□□ 0.16
CAPN1-217ENST00000529133 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
CAPN1-217ENST00000529133 EVC2Q86UK5 1308 aa16.04■□□□□ 0.16
CAPN1-217ENST00000529133 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-217ENST00000529133 IQSEC2Q5JU85 1478 aa16.03■□□□□ 0.16
CAPN1-217ENST00000529133 TMF1P82094 1093 aa16.03■□□□□ 0.16
CAPN1-217ENST00000529133 FMN2Q9NZ56 1722 aa16.02■□□□□ 0.16
CAPN1-217ENST00000529133 SLC24A1O60721 1099 aa16.02■□□□□ 0.16
CAPN1-217ENST00000529133 CDK19Q9BWU1 502 aa16.02■□□□□ 0.16
CAPN1-217ENST00000529133 CERKQ8TCT0 537 aa16.01■□□□□ 0.15
CAPN1-217ENST00000529133 ATP7BP35670 1465 aa16■□□□□ 0.15
CAPN1-217ENST00000529133 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
CAPN1-217ENST00000529133 ATF3P18847 181 aa16■□□□□ 0.15
CAPN1-217ENST00000529133 SRPK2P78362 688 aaKnown RBP16■□□□□ 0.15
CAPN1-217ENST00000529133 CADPS2Q86UW7 1296 aa16■□□□□ 0.15
CAPN1-217ENST00000529133 CABP2Q9NPB3 220 aa16■□□□□ 0.15
CAPN1-217ENST00000529133 MST1RQ04912 1400 aa16■□□□□ 0.15
CAPN1-217ENST00000529133 ANKARQ7Z5J8 1434 aa16■□□□□ 0.15
CAPN1-217ENST00000529133 PRR36Q9H6K5 1346 aa15.99■□□□□ 0.15
CAPN1-217ENST00000529133 USP32Q8NFA0 1604 aa15.99■□□□□ 0.15
CAPN1-217ENST00000529133 KIF7Q2M1P5 1343 aa15.97■□□□□ 0.15
CAPN1-217ENST00000529133 NUTM2FA1L443 756 aa15.97■□□□□ 0.15
CAPN1-217ENST00000529133 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
CAPN1-217ENST00000529133 PUS7Q96PZ0 661 aaKnown RBP15.97■□□□□ 0.15
CAPN1-217ENST00000529133 ATAD2Q6PL18 1390 aa15.97■□□□□ 0.15
CAPN1-217ENST00000529133 C1orf167Q5SNV9 1468 aa15.97■□□□□ 0.15
CAPN1-217ENST00000529133 TOPAZ1Q8N9V7 1692 aa15.96■□□□□ 0.15
CAPN1-217ENST00000529133 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.15
CAPN1-217ENST00000529133 CCDC7Q96M83 1385 aa15.96■□□□□ 0.15
CAPN1-217ENST00000529133 WASHC2AQ641Q2 1341 aa15.95■□□□□ 0.14
CAPN1-217ENST00000529133 POLR3GLQ9BT43 218 aa15.94■□□□□ 0.14
CAPN1-217ENST00000529133 PPIP5K1Q6PFW1 1433 aa15.93■□□□□ 0.14
CAPN1-217ENST00000529133 ITSN1Q15811 1721 aa15.92■□□□□ 0.14
CAPN1-217ENST00000529133 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-217ENST00000529133 SLAIN2Q9P270 581 aa15.92■□□□□ 0.14
CAPN1-217ENST00000529133 CCDC61Q9Y6R9 512 aa15.92■□□□□ 0.14
CAPN1-217ENST00000529133 MYOM1P52179 1685 aa15.92■□□□□ 0.14
CAPN1-217ENST00000529133 NINLQ9Y2I6 1382 aa15.9■□□□□ 0.14
CAPN1-217ENST00000529133 UBAP1LF5GYI3 381 aa15.9■□□□□ 0.14
CAPN1-217ENST00000529133 TOM1O60784 492 aa15.9■□□□□ 0.14
CAPN1-217ENST00000529133 ESCO1Q5FWF5 840 aa15.9■□□□□ 0.14
CAPN1-217ENST00000529133 ORAI2Q96SN7 254 aa15.9■□□□□ 0.14
CAPN1-217ENST00000529133 RGPD8O14715 1765 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-217ENST00000529133 KIF1AQ12756 1690 aa15.89■□□□□ 0.13
CAPN1-217ENST00000529133 PLEKHG3A1L390 1219 aa15.89■□□□□ 0.13
CAPN1-217ENST00000529133 BRINP3Q76B58 766 aa15.89■□□□□ 0.13
CAPN1-217ENST00000529133 TMC1Q8TDI8 760 aa15.89■□□□□ 0.13
CAPN1-217ENST00000529133 CABP1Q9NZU7 370 aa15.89■□□□□ 0.13
CAPN1-217ENST00000529133 PHF8Q9UPP1 1060 aa15.89■□□□□ 0.13
CAPN1-217ENST00000529133 SLC12A5Q9H2X9 1139 aa15.88■□□□□ 0.13
CAPN1-217ENST00000529133 CD163L1Q9NR16 1453 aa15.88■□□□□ 0.13
CAPN1-217ENST00000529133 PMFBP1Q8TBY8 1022 aa15.87■□□□□ 0.13
CAPN1-217ENST00000529133 POLR3AO14802 1390 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-217ENST00000529133 ROBO1Q9Y6N7 1651 aa15.86■□□□□ 0.13
CAPN1-217ENST00000529133 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
CAPN1-217ENST00000529133 ACEP12821 1306 aa15.85■□□□□ 0.13
CAPN1-217ENST00000529133 A0A1W2PP64 1363 aa15.85■□□□□ 0.13
CAPN1-217ENST00000529133 ANKRD36BQ8N2N9 1353 aa15.85■□□□□ 0.13
CAPN1-217ENST00000529133 PIP4K2BP78356 416 aa15.84■□□□□ 0.13
CAPN1-217ENST00000529133 NGDNQ8NEJ9 315 aaKnown RBP15.84■□□□□ 0.13
CAPN1-217ENST00000529133 TERF2IPQ9NYB0 399 aa15.83■□□□□ 0.12
CAPN1-217ENST00000529133 NHSL1Q5SYE7 1610 aa15.83■□□□□ 0.12
CAPN1-217ENST00000529133 AKAP12Q02952 1782 aa15.82■□□□□ 0.12
CAPN1-217ENST00000529133 FOXO3O43524 673 aa15.82■□□□□ 0.12
CAPN1-217ENST00000529133 HDGFL2Q7Z4V5 671 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-217ENST00000529133 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
CAPN1-217ENST00000529133 USP6P35125 1406 aa15.82■□□□□ 0.12
CAPN1-217ENST00000529133 AHDC1Q5TGY3 1603 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-217ENST00000529133 NRKQ7Z2Y5 1582 aa15.81■□□□□ 0.12
CAPN1-217ENST00000529133 MON2Q7Z3U7 1717 aa15.81■□□□□ 0.12
CAPN1-217ENST00000529133 NPHP3Q7Z494 1330 aa15.81■□□□□ 0.12
CAPN1-217ENST00000529133 KTN1Q86UP2 1357 aaKnown RBP15.81■□□□□ 0.12
CAPN1-217ENST00000529133 PXDNQ92626 1479 aa15.81■□□□□ 0.12
CAPN1-217ENST00000529133 DDX17Q92841 729 aaKnown RBP15.81■□□□□ 0.12
CAPN1-217ENST00000529133 PANK3Q9H999 370 aa15.81■□□□□ 0.12
CAPN1-217ENST00000529133 SSH2Q76I76 1423 aa15.8■□□□□ 0.12
CAPN1-217ENST00000529133 ZNF692Q9BU19 519 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-217ENST00000529133 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-217ENST00000529133 PSME1Q06323 249 aa15.79■□□□□ 0.12
CAPN1-217ENST00000529133 DDX10Q13206 875 aaKnown RBP15.79■□□□□ 0.12
CAPN1-217ENST00000529133 CARD14Q9BXL6 1004 aa15.79■□□□□ 0.12
CAPN1-217ENST00000529133 EDC4Q6P2E9 1401 aaKnown RBP15.78■□□□□ 0.12
CAPN1-217ENST00000529133 NSD3Q9BZ95 1437 aa15.78■□□□□ 0.12
CAPN1-217ENST00000529133 KRT28Q7Z3Y7 464 aa15.78■□□□□ 0.12
CAPN1-217ENST00000529133 TRPM3Q9HCF6 1732 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-217ENST00000529133 BRD4O60885 1362 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms