RNA–Protein interactions for RNA: ENST00000529054.5

MS4A6A-210, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5 BASIC

Gene MS4A6A, Length 1,160 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-210ENST00000529054 MSS51Q4VC12 460 aa12.9□□□□□ -0.34
MS4A6A-210ENST00000529054 ZNF598Q86UK7 904 aaKnown RBP12.89□□□□□ -0.35
MS4A6A-210ENST00000529054 LCE2BO14633 110 aa12.88□□□□□ -0.35
MS4A6A-210ENST00000529054 PARP9Q8IXQ6 854 aa12.88□□□□□ -0.35
MS4A6A-210ENST00000529054 SYMPKQ92797 1274 aaKnown RBP12.88□□□□□ -0.35
MS4A6A-210ENST00000529054 AK7Q96M32 723 aa12.88□□□□□ -0.35
MS4A6A-210ENST00000529054 ZNF697Q5TEC3 545 aa12.87□□□□□ -0.35
MS4A6A-210ENST00000529054 SPIRE2Q8WWL2 714 aa12.86□□□□□ -0.35
MS4A6A-210ENST00000529054 USB1Q9BQ65 265 aaKnown RBP12.86□□□□□ -0.35
MS4A6A-210ENST00000529054 SLC24A3Q9HC58 644 aa12.85□□□□□ -0.35
MS4A6A-210ENST00000529054 PCDHGC3Q9UN70 934 aa12.84□□□□□ -0.35
MS4A6A-210ENST00000529054 MS4A1P11836 297 aa12.83□□□□□ -0.36
MS4A6A-210ENST00000529054 NDUFV2P19404 249 aa12.83□□□□□ -0.36
MS4A6A-210ENST00000529054 MMP16P51512 607 aa12.83□□□□□ -0.36
MS4A6A-210ENST00000529054 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
MS4A6A-210ENST00000529054 MOXD2PA6NHM9 499 aa12.81□□□□□ -0.36
MS4A6A-210ENST00000529054 TNFRSF10AO00220 468 aa12.81□□□□□ -0.36
MS4A6A-210ENST00000529054 DXOO77932 396 aaKnown RBP12.81□□□□□ -0.36
MS4A6A-210ENST00000529054 FDX1P10109 184 aa12.81□□□□□ -0.36
MS4A6A-210ENST00000529054 GDF9O60383 454 aa12.8□□□□□ -0.36
MS4A6A-210ENST00000529054 RPIAP49247 311 aa12.8□□□□□ -0.36
MS4A6A-210ENST00000529054 PDE4DQ08499 809 aa12.78□□□□□ -0.36
MS4A6A-210ENST00000529054 TRAF7Q6Q0C0 670 aa12.78□□□□□ -0.36
MS4A6A-210ENST00000529054 PKD2L1Q9P0L9 805 aa12.78□□□□□ -0.36
MS4A6A-210ENST00000529054 PRR20EP86478 221 aa12.77□□□□□ -0.37
MS4A6A-210ENST00000529054 PRR20CP86479 221 aa12.77□□□□□ -0.37
MS4A6A-210ENST00000529054 PRR20DP86480 221 aa12.77□□□□□ -0.37
MS4A6A-210ENST00000529054 PRR20BP86481 221 aa12.77□□□□□ -0.37
MS4A6A-210ENST00000529054 PRR20AP86496 221 aa12.77□□□□□ -0.37
MS4A6A-210ENST00000529054 FOXC1Q12948 553 aa12.77□□□□□ -0.37
MS4A6A-210ENST00000529054 C6orf229H3BNL8 230 aa12.76□□□□□ -0.37
MS4A6A-210ENST00000529054 TBC1D2Q9BYX2 928 aa12.76□□□□□ -0.37
MS4A6A-210ENST00000529054 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
MS4A6A-210ENST00000529054 JUNDP17535 347 aa12.75□□□□□ -0.37
MS4A6A-210ENST00000529054 RETREG3Q86VR2 466 aa12.75□□□□□ -0.37
MS4A6A-210ENST00000529054 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
MS4A6A-210ENST00000529054 ZBTB24O43167 697 aaPredicted RBP12.73□□□□□ -0.37
MS4A6A-210ENST00000529054 TRIM32Q13049 653 aa12.7□□□□□ -0.38
MS4A6A-210ENST00000529054 RSBN1LQ6PCB5 846 aaPredicted RBP12.7□□□□□ -0.38
MS4A6A-210ENST00000529054 FAM187AA6NFU0 413 aa12.69□□□□□ -0.38
MS4A6A-210ENST00000529054 PKDCCQ504Y2 493 aa12.69□□□□□ -0.38
MS4A6A-210ENST00000529054 PCDHB15Q9Y5E8 787 aa12.69□□□□□ -0.38
MS4A6A-210ENST00000529054 DGAT1O75907 488 aa12.66□□□□□ -0.38
MS4A6A-210ENST00000529054 MTMR2Q13614 643 aa12.66□□□□□ -0.38
MS4A6A-210ENST00000529054 PRR7Q8TB68 274 aa12.66□□□□□ -0.38
MS4A6A-210ENST00000529054 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
MS4A6A-210ENST00000529054 SPTLC1O15269 473 aa12.65□□□□□ -0.38
MS4A6A-210ENST00000529054 DIXDC1Q155Q3 683 aa12.65□□□□□ -0.38
MS4A6A-210ENST00000529054 TPRNQ4KMQ1 711 aa12.65□□□□□ -0.38
MS4A6A-210ENST00000529054 PTCRAQ6ISU1 281 aaPredicted RBP12.65□□□□□ -0.38
MS4A6A-210ENST00000529054 MYT1Q01538 1121 aa12.64□□□□□ -0.39
MS4A6A-210ENST00000529054 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
MS4A6A-210ENST00000529054 TOR4AQ9NXH8 423 aa12.64□□□□□ -0.39
MS4A6A-210ENST00000529054 GJA5P36382 358 aa12.63□□□□□ -0.39
MS4A6A-210ENST00000529054 WNT7AO00755 349 aa12.62□□□□□ -0.39
MS4A6A-210ENST00000529054 SKOR1P84550 965 aa12.62□□□□□ -0.39
MS4A6A-210ENST00000529054 CSPP1Q1MSJ5 1256 aa12.62□□□□□ -0.39
MS4A6A-210ENST00000529054 MYSM1Q5VVJ2 828 aa12.62□□□□□ -0.39
MS4A6A-210ENST00000529054 CYP4X1Q8N118 509 aa12.62□□□□□ -0.39
MS4A6A-210ENST00000529054 CABLES1Q8TDN4 633 aa12.62□□□□□ -0.39
MS4A6A-210ENST00000529054 LIMD1Q9UGP4 676 aa12.62□□□□□ -0.39
MS4A6A-210ENST00000529054 HRCP23327 699 aa12.61□□□□□ -0.39
MS4A6A-210ENST00000529054 SPDYE5A6NIY4 337 aa12.6□□□□□ -0.39
MS4A6A-210ENST00000529054 CFAP99D6REC4 459 aa12.6□□□□□ -0.39
MS4A6A-210ENST00000529054 CCNYL3P0C7X3 344 aa12.6□□□□□ -0.39
MS4A6A-210ENST00000529054 MRGPRX2Q96LB1 330 aa12.6□□□□□ -0.39
MS4A6A-210ENST00000529054 PTPRNQ16849 979 aa12.59□□□□□ -0.39
MS4A6A-210ENST00000529054 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
MS4A6A-210ENST00000529054 ZBTB3Q9H5J0 574 aa12.58□□□□□ -0.4
MS4A6A-210ENST00000529054 ST8SIA5O15466 376 aa12.57□□□□□ -0.4
MS4A6A-210ENST00000529054 QPCTQ16769 361 aa12.57□□□□□ -0.4
MS4A6A-210ENST00000529054 TTC24A2A3L6 582 aaPredicted RBP12.56□□□□□ -0.4
MS4A6A-210ENST00000529054 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
MS4A6A-210ENST00000529054 DESI1Q6ICB0 168 aa12.56□□□□□ -0.4
MS4A6A-210ENST00000529054 EVA1BQ9NVM1 165 aa12.56□□□□□ -0.4
MS4A6A-210ENST00000529054 WNT7BP56706 349 aa12.55□□□□□ -0.4
MS4A6A-210ENST00000529054 SNIP1Q8TAD8 396 aaKnown RBP12.55□□□□□ -0.4
MS4A6A-210ENST00000529054 PRPF38BQ5VTL8 546 aaKnown RBP12.54□□□□□ -0.4
MS4A6A-210ENST00000529054 UNC93B1Q9H1C4 597 aa12.54□□□□□ -0.4
MS4A6A-210ENST00000529054 KCNH2Q12809 1159 aa12.53□□□□□ -0.4
MS4A6A-210ENST00000529054 ZNF787Q6DD87 383 aa12.53□□□□□ -0.4
MS4A6A-210ENST00000529054 KDM4CQ9H3R0 1056 aa12.53□□□□□ -0.4
MS4A6A-210ENST00000529054 AAASQ9NRG9 546 aa12.53□□□□□ -0.4
MS4A6A-210ENST00000529054 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
MS4A6A-210ENST00000529054 J3QL48 77 aa12.52□□□□□ -0.41
MS4A6A-210ENST00000529054 SMPD1P17405 629 aa12.52□□□□□ -0.41
MS4A6A-210ENST00000529054 LYPD8Q6UX82 237 aa12.52□□□□□ -0.41
MS4A6A-210ENST00000529054 SH3BP2P78314 561 aa12.51□□□□□ -0.41
MS4A6A-210ENST00000529054 NUTM2BA6NNL0 878 aaPredicted RBP12.5□□□□□ -0.41
MS4A6A-210ENST00000529054 NUTM2EB1AL46 878 aaPredicted RBP12.5□□□□□ -0.41
MS4A6A-210ENST00000529054 POTECB2RU33 542 aa12.5□□□□□ -0.41
MS4A6A-210ENST00000529054 LILRB3O75022 631 aa12.5□□□□□ -0.41
MS4A6A-210ENST00000529054 AVPP01185 164 aa12.5□□□□□ -0.41
MS4A6A-210ENST00000529054 CLK2P49760 499 aaKnown RBP12.5□□□□□ -0.41
MS4A6A-210ENST00000529054 LINC01559Q495D7 138 aa12.5□□□□□ -0.41
MS4A6A-210ENST00000529054 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
MS4A6A-210ENST00000529054 NUTM2AQ8IVF1 878 aaPredicted RBP12.5□□□□□ -0.41
MS4A6A-210ENST00000529054 PER1O15534 1290 aaPredicted RBP12.49□□□□□ -0.41
MS4A6A-210ENST00000529054 CTHP32929 405 aa12.49□□□□□ -0.41
MS4A6A-210ENST00000529054 TUSC1Q2TAM9 212 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms