RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 XPCQ01831 940 aaPredicted RBP29.04■■■□□ 2.24
SSRP1-204ENST00000529002 MYOM2P54296 1465 aa29.04■■■□□ 2.24
SSRP1-204ENST00000529002 ESCO1Q5FWF5 840 aa28.99■■■□□ 2.23
SSRP1-204ENST00000529002 PXDNQ92626 1479 aa28.98■■■□□ 2.23
SSRP1-204ENST00000529002 BRWD3Q6RI45 1802 aa28.97■■■□□ 2.23
SSRP1-204ENST00000529002 VGFO15240 615 aaPredicted RBP28.96■■■□□ 2.23
SSRP1-204ENST00000529002 GJD4Q96KN9 370 aaPredicted RBP28.96■■■□□ 2.23
SSRP1-204ENST00000529002 PPLO60437 1756 aa28.96■■■□□ 2.23
SSRP1-204ENST00000529002 FOXO3O43524 673 aa28.95■■■□□ 2.22
SSRP1-204ENST00000529002 NUTM2FA1L443 756 aa28.94■■■□□ 2.22
SSRP1-204ENST00000529002 FOXD1Q16676 465 aa28.94■■■□□ 2.22
SSRP1-204ENST00000529002 HFM1A2PYH4 1435 aa28.94■■■□□ 2.22
SSRP1-204ENST00000529002 NPHP3Q7Z494 1330 aa28.94■■■□□ 2.22
SSRP1-204ENST00000529002 CCDC125Q86Z20 511 aa28.93■■■□□ 2.22
SSRP1-204ENST00000529002 PRAG1Q86YV5 1406 aa28.93■■■□□ 2.22
SSRP1-204ENST00000529002 GLI3P10071 1580 aa28.92■■■□□ 2.22
SSRP1-204ENST00000529002 CDC42BPGQ6DT37 1551 aa28.91■■■□□ 2.22
SSRP1-204ENST00000529002 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.91■■■□□ 2.22
SSRP1-204ENST00000529002 DEFB132Q7Z7B7 95 aa28.89■■■□□ 2.22
SSRP1-204ENST00000529002 RALGAPBQ86X10 1494 aa28.88■■■□□ 2.21
SSRP1-204ENST00000529002 NAIPQ13075 1403 aa28.86■■■□□ 2.21
SSRP1-204ENST00000529002 WAPLQ7Z5K2 1190 aa28.85■■■□□ 2.21
SSRP1-204ENST00000529002 UNC5CLQ8IV45 518 aa28.84■■■□□ 2.21
SSRP1-204ENST00000529002 STK26Q9P289 416 aa28.84■■■□□ 2.21
SSRP1-204ENST00000529002 BLMP54132 1417 aaPredicted RBP28.84■■■□□ 2.21
SSRP1-204ENST00000529002 SLIT2O94813 1529 aa28.84■■■□□ 2.21
SSRP1-204ENST00000529002 RPGRIP1LQ68CZ1 1315 aa28.83■■■□□ 2.21
SSRP1-204ENST00000529002 RGPD8O14715 1765 aaPredicted RBP28.8■■■□□ 2.2
SSRP1-204ENST00000529002 PLEKHH1Q9ULM0 1364 aa28.8■■■□□ 2.2
SSRP1-204ENST00000529002 PLEKHG5O94827 1062 aa28.8■■■□□ 2.2
SSRP1-204ENST00000529002 ADGRF5Q8IZF2 1346 aa28.79■■■□□ 2.2
SSRP1-204ENST00000529002 USP32Q8NFA0 1604 aa28.79■■■□□ 2.2
SSRP1-204ENST00000529002 SPATA31A3Q5VYP0 1347 aa28.78■■■□□ 2.2
SSRP1-204ENST00000529002 FMN2Q9NZ56 1722 aa28.77■■■□□ 2.2
SSRP1-204ENST00000529002 SEPT12Q8IYM1 358 aa28.77■■■□□ 2.2
SSRP1-204ENST00000529002 LRPPRCP42704 1394 aaKnown RBP28.76■■■□□ 2.2
SSRP1-204ENST00000529002 TMEM132EQ6IEE7 984 aa28.75■■■□□ 2.19
SSRP1-204ENST00000529002 CABLES1Q8TDN4 633 aa28.75■■■□□ 2.19
SSRP1-204ENST00000529002 PLCH1Q4KWH8 1693 aa28.74■■■□□ 2.19
SSRP1-204ENST00000529002 KRT28Q7Z3Y7 464 aa28.73■■■□□ 2.19
SSRP1-204ENST00000529002 SLC4A1APQ9BWU0 796 aaKnown RBP28.73■■■□□ 2.19
SSRP1-204ENST00000529002 KIF1AQ12756 1690 aa28.71■■■□□ 2.19
SSRP1-204ENST00000529002 TECPR2O15040 1411 aa28.71■■■□□ 2.19
SSRP1-204ENST00000529002 SF3B2Q13435 895 aaKnown RBP28.71■■■□□ 2.19
SSRP1-204ENST00000529002 LRP5O75197 1615 aa28.71■■■□□ 2.19
SSRP1-204ENST00000529002 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.19
SSRP1-204ENST00000529002 KNDC1Q76NI1 1749 aa28.7■■■□□ 2.19
SSRP1-204ENST00000529002 PSDA5PKW4 1024 aaPredicted RBP28.7■■■□□ 2.18
SSRP1-204ENST00000529002 RGL3Q3MIN7 710 aa28.7■■■□□ 2.18
SSRP1-204ENST00000529002 IFT172Q9UG01 1749 aa28.69■■■□□ 2.18
SSRP1-204ENST00000529002 CCDC9Q9Y3X0 531 aaKnown RBP28.68■■■□□ 2.18
SSRP1-204ENST00000529002 ABCA3Q99758 1704 aa28.68■■■□□ 2.18
SSRP1-204ENST00000529002 CCDC144AA2RUR9 1427 aa28.68■■■□□ 2.18
SSRP1-204ENST00000529002 HAP1P54257 671 aaPredicted RBP28.67■■■□□ 2.18
SSRP1-204ENST00000529002 VPS72Q15906 364 aa28.67■■■□□ 2.18
SSRP1-204ENST00000529002 NWD2Q9ULI1 1742 aa28.66■■■□□ 2.18
SSRP1-204ENST00000529002 ABCC11Q96J66 1382 aa28.65■■■□□ 2.18
SSRP1-204ENST00000529002 KRT27Q7Z3Y8 459 aa28.65■■■□□ 2.18
SSRP1-204ENST00000529002 TNS3Q68CZ2 1445 aa28.64■■■□□ 2.18
SSRP1-204ENST00000529002 LMOD2Q6P5Q4 547 aa28.62■■■□□ 2.17
SSRP1-204ENST00000529002 ONECUT3O60422 494 aaPredicted RBP28.61■■■□□ 2.17
SSRP1-204ENST00000529002 PHF8Q9UPP1 1060 aa28.61■■■□□ 2.17
SSRP1-204ENST00000529002 SPATA31E1Q6ZUB1 1445 aa28.6■■■□□ 2.17
SSRP1-204ENST00000529002 YTHDC2Q9H6S0 1430 aaKnown RBP28.6■■■□□ 2.17
SSRP1-204ENST00000529002 A0A0G2JS52 829 aa28.59■■■□□ 2.17
SSRP1-204ENST00000529002 MYT1Q01538 1121 aa28.59■■■□□ 2.17
SSRP1-204ENST00000529002 FAM83GA6ND36 823 aa28.58■■■□□ 2.17
SSRP1-204ENST00000529002 HRCP23327 699 aa28.58■■■□□ 2.17
SSRP1-204ENST00000529002 NRAPQ86VF7 1730 aa28.57■■■□□ 2.16
SSRP1-204ENST00000529002 PIK3C2GO75747 1445 aa28.56■■■□□ 2.16
SSRP1-204ENST00000529002 FAM182BQ5T319 152 aa28.56■■■□□ 2.16
SSRP1-204ENST00000529002 PSME1Q06323 249 aa28.55■■■□□ 2.16
SSRP1-204ENST00000529002 FAM98CQ17RN3 349 aaKnown RBP28.55■■■□□ 2.16
SSRP1-204ENST00000529002 ANKRD30BQ9BXX2 1392 aa28.54■■■□□ 2.16
SSRP1-204ENST00000529002 BAG6P46379 1132 aa28.54■■■□□ 2.16
SSRP1-204ENST00000529002 SAFB2Q14151 953 aaKnown RBP eCLIP28.54■■■□□ 2.16
SSRP1-204ENST00000529002 EN1Q05925 392 aaPredicted RBP28.53■■■□□ 2.16
SSRP1-204ENST00000529002 NRXN1Q9ULB1 1477 aa28.53■■■□□ 2.16
SSRP1-204ENST00000529002 SBNO1A3KN83 1393 aa28.51■■■□□ 2.16
SSRP1-204ENST00000529002 PMFBP1Q8TBY8 1022 aa28.51■■■□□ 2.15
SSRP1-204ENST00000529002 RGPD1P0DJD0 1748 aa28.49■■■□□ 2.15
SSRP1-204ENST00000529002 BTG4Q9NY30 223 aa28.48■■■□□ 2.15
SSRP1-204ENST00000529002 ARHGEF10O15013 1369 aa28.48■■■□□ 2.15
SSRP1-204ENST00000529002 TRPM3Q9HCF6 1732 aaPredicted RBP28.47■■■□□ 2.15
SSRP1-204ENST00000529002 R3HDM1Q15032 1099 aaKnown RBP28.47■■■□□ 2.15
SSRP1-204ENST00000529002 CFAP70Q5T0N1 1121 aa28.46■■■□□ 2.15
SSRP1-204ENST00000529002 SIRT1Q96EB6 747 aa28.46■■■□□ 2.15
SSRP1-204ENST00000529002 PRAM1Q96QH2 718 aa28.45■■■□□ 2.14
SSRP1-204ENST00000529002 TNS1Q9HBL0 1735 aaKnown RBP28.44■■■□□ 2.14
SSRP1-204ENST00000529002 C14orf93Q9H972 538 aaKnown RBP28.44■■■□□ 2.14
SSRP1-204ENST00000529002 COL14A1Q05707 1796 aaKnown RBP28.42■■■□□ 2.14
SSRP1-204ENST00000529002 ALS2Q96Q42 1657 aa28.42■■■□□ 2.14
SSRP1-204ENST00000529002 MPHOSPH9Q99550 1183 aa28.41■■■□□ 2.14
SSRP1-204ENST00000529002 DHX57Q6P158 1386 aaKnown RBP28.39■■■□□ 2.14
SSRP1-204ENST00000529002 EZH2Q15910 746 aaKnown RBP28.39■■■□□ 2.14
SSRP1-204ENST00000529002 THSD7AQ9UPZ6 1657 aa28.38■■■□□ 2.13
SSRP1-204ENST00000529002 CRYBG1Q9Y4K1 1723 aa28.38■■■□□ 2.13
SSRP1-204ENST00000529002 HIRIP3Q9BW71 556 aaPredicted RBP28.37■■■□□ 2.13
SSRP1-204ENST00000529002 SPATA31A5Q5VU36 1347 aa28.37■■■□□ 2.13
SSRP1-204ENST00000529002 SPATA31A7Q8IWB4 1347 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms