RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 PRAG1Q86YV5 1406 aa27.34■■□□□ 1.97
LTBP3-211ENST00000528966 KIF1BO60333 1816 aa27.33■■□□□ 1.97
LTBP3-211ENST00000528966 GJD4Q96KN9 370 aaPredicted RBP27.31■■□□□ 1.96
LTBP3-211ENST00000528966 PXDNQ92626 1479 aa27.31■■□□□ 1.96
LTBP3-211ENST00000528966 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.3■■□□□ 1.96
LTBP3-211ENST00000528966 NPHP3Q7Z494 1330 aa27.27■■□□□ 1.96
LTBP3-211ENST00000528966 ITGAEP38570 1179 aa27.27■■□□□ 1.96
LTBP3-211ENST00000528966 GLI3P10071 1580 aa27.26■■□□□ 1.96
LTBP3-211ENST00000528966 HFM1A2PYH4 1435 aa27.26■■□□□ 1.95
LTBP3-211ENST00000528966 BLMP54132 1417 aaPredicted RBP27.26■■□□□ 1.95
LTBP3-211ENST00000528966 CDC42BPGQ6DT37 1551 aa27.26■■□□□ 1.95
LTBP3-211ENST00000528966 BRWD3Q6RI45 1802 aa27.25■■□□□ 1.95
LTBP3-211ENST00000528966 XPCQ01831 940 aaPredicted RBP27.24■■□□□ 1.95
LTBP3-211ENST00000528966 ESCO1Q5FWF5 840 aa27.24■■□□□ 1.95
LTBP3-211ENST00000528966 RALGAPBQ86X10 1494 aa27.23■■□□□ 1.95
LTBP3-211ENST00000528966 VGFO15240 615 aaPredicted RBP27.22■■□□□ 1.95
LTBP3-211ENST00000528966 FOXO3O43524 673 aa27.21■■□□□ 1.95
LTBP3-211ENST00000528966 DEFB132Q7Z7B7 95 aa27.21■■□□□ 1.95
LTBP3-211ENST00000528966 SLIT2O94813 1529 aa27.21■■□□□ 1.95
LTBP3-211ENST00000528966 LRP5O75197 1615 aa27.2■■□□□ 1.95
LTBP3-211ENST00000528966 UNC5CLQ8IV45 518 aa27.18■■□□□ 1.94
LTBP3-211ENST00000528966 PPLO60437 1756 aa27.17■■□□□ 1.94
LTBP3-211ENST00000528966 USP32Q8NFA0 1604 aa27.13■■□□□ 1.93
LTBP3-211ENST00000528966 NAIPQ13075 1403 aa27.13■■□□□ 1.93
LTBP3-211ENST00000528966 LRPPRCP42704 1394 aaKnown RBP27.12■■□□□ 1.93
LTBP3-211ENST00000528966 RPGRIP1LQ68CZ1 1315 aa27.11■■□□□ 1.93
LTBP3-211ENST00000528966 NUTM2FA1L443 756 aa27.1■■□□□ 1.93
LTBP3-211ENST00000528966 SPATA31A3Q5VYP0 1347 aa27.1■■□□□ 1.93
LTBP3-211ENST00000528966 SEPT12Q8IYM1 358 aa27.09■■□□□ 1.93
LTBP3-211ENST00000528966 SF3B2Q13435 895 aaKnown RBP27.08■■□□□ 1.93
LTBP3-211ENST00000528966 FMN2Q9NZ56 1722 aa27.06■■□□□ 1.92
LTBP3-211ENST00000528966 KIF1AQ12756 1690 aa27.05■■□□□ 1.92
LTBP3-211ENST00000528966 PLCH1Q4KWH8 1693 aa27.05■■□□□ 1.92
LTBP3-211ENST00000528966 WAPLQ7Z5K2 1190 aa27.05■■□□□ 1.92
LTBP3-211ENST00000528966 TECPR2O15040 1411 aa27.05■■□□□ 1.92
LTBP3-211ENST00000528966 CCDC144AA2RUR9 1427 aa27.03■■□□□ 1.92
LTBP3-211ENST00000528966 VPS72Q15906 364 aa27.03■■□□□ 1.92
LTBP3-211ENST00000528966 NWD2Q9ULI1 1742 aa27.03■■□□□ 1.92
LTBP3-211ENST00000528966 ONECUT3O60422 494 aaPredicted RBP27.02■■□□□ 1.92
LTBP3-211ENST00000528966 PLEKHH1Q9ULM0 1364 aa27.01■■□□□ 1.91
LTBP3-211ENST00000528966 PSDA5PKW4 1024 aaPredicted RBP27.01■■□□□ 1.91
LTBP3-211ENST00000528966 STK26Q9P289 416 aa27.01■■□□□ 1.91
LTBP3-211ENST00000528966 KNDC1Q76NI1 1749 aa27■■□□□ 1.91
LTBP3-211ENST00000528966 ABCA3Q99758 1704 aa27■■□□□ 1.91
LTBP3-211ENST00000528966 KRT27Q7Z3Y8 459 aa27■■□□□ 1.91
LTBP3-211ENST00000528966 ADGRF5Q8IZF2 1346 aa26.99■■□□□ 1.91
LTBP3-211ENST00000528966 HRCP23327 699 aa26.99■■□□□ 1.91
LTBP3-211ENST00000528966 KRT28Q7Z3Y7 464 aa26.99■■□□□ 1.91
LTBP3-211ENST00000528966 RGPD8O14715 1765 aaPredicted RBP26.99■■□□□ 1.91
LTBP3-211ENST00000528966 CABLES1Q8TDN4 633 aa26.98■■□□□ 1.91
LTBP3-211ENST00000528966 TNS3Q68CZ2 1445 aa26.97■■□□□ 1.91
LTBP3-211ENST00000528966 RRBP1Q9P2E9 1410 aaKnown RBP26.96■■□□□ 1.91
LTBP3-211ENST00000528966 ABCC11Q96J66 1382 aa26.96■■□□□ 1.91
LTBP3-211ENST00000528966 PPARGC1BQ86YN6 1023 aaKnown RBP26.95■■□□□ 1.9
LTBP3-211ENST00000528966 CCDC9Q9Y3X0 531 aaKnown RBP26.95■■□□□ 1.9
LTBP3-211ENST00000528966 IFT172Q9UG01 1749 aa26.94■■□□□ 1.9
LTBP3-211ENST00000528966 HAP1P54257 671 aaPredicted RBP26.94■■□□□ 1.9
LTBP3-211ENST00000528966 BAG6P46379 1132 aa26.93■■□□□ 1.9
LTBP3-211ENST00000528966 TMEM132EQ6IEE7 984 aa26.92■■□□□ 1.9
LTBP3-211ENST00000528966 NRAPQ86VF7 1730 aa26.91■■□□□ 1.9
LTBP3-211ENST00000528966 PLEKHG5O94827 1062 aa26.91■■□□□ 1.9
LTBP3-211ENST00000528966 SLC4A1APQ9BWU0 796 aaKnown RBP26.9■■□□□ 1.9
LTBP3-211ENST00000528966 PHF8Q9UPP1 1060 aa26.88■■□□□ 1.89
LTBP3-211ENST00000528966 RGPD1P0DJD0 1748 aa26.87■■□□□ 1.89
LTBP3-211ENST00000528966 SBNO1A3KN83 1393 aa26.87■■□□□ 1.89
LTBP3-211ENST00000528966 FAM83GA6ND36 823 aa26.87■■□□□ 1.89
LTBP3-211ENST00000528966 YTHDC2Q9H6S0 1430 aaKnown RBP26.87■■□□□ 1.89
LTBP3-211ENST00000528966 NRXN1Q9ULB1 1477 aa26.87■■□□□ 1.89
LTBP3-211ENST00000528966 A0A0G2JS52 829 aa26.86■■□□□ 1.89
LTBP3-211ENST00000528966 MYT1Q01538 1121 aa26.86■■□□□ 1.89
LTBP3-211ENST00000528966 PSME1Q06323 249 aa26.86■■□□□ 1.89
LTBP3-211ENST00000528966 SPATA31E1Q6ZUB1 1445 aa26.86■■□□□ 1.89
LTBP3-211ENST00000528966 PIK3C2GO75747 1445 aa26.85■■□□□ 1.89
LTBP3-211ENST00000528966 EN1Q05925 392 aaPredicted RBP26.85■■□□□ 1.89
LTBP3-211ENST00000528966 FAM98CQ17RN3 349 aaKnown RBP26.85■■□□□ 1.89
LTBP3-211ENST00000528966 ARHGEF10O15013 1369 aa26.84■■□□□ 1.89
LTBP3-211ENST00000528966 RGL3Q3MIN7 710 aa26.84■■□□□ 1.89
LTBP3-211ENST00000528966 ANKRD30BQ9BXX2 1392 aa26.84■■□□□ 1.89
LTBP3-211ENST00000528966 LMOD2Q6P5Q4 547 aa26.83■■□□□ 1.89
LTBP3-211ENST00000528966 TNS1Q9HBL0 1735 aaKnown RBP26.82■■□□□ 1.88
LTBP3-211ENST00000528966 R3HDM1Q15032 1099 aaKnown RBP26.82■■□□□ 1.88
LTBP3-211ENST00000528966 FAM182BQ5T319 152 aa26.81■■□□□ 1.88
LTBP3-211ENST00000528966 DISP2A7MBM2 1401 aa26.8■■□□□ 1.88
LTBP3-211ENST00000528966 SIRT1Q96EB6 747 aa26.79■■□□□ 1.88
LTBP3-211ENST00000528966 BTG4Q9NY30 223 aa26.78■■□□□ 1.88
LTBP3-211ENST00000528966 TRPM3Q9HCF6 1732 aaPredicted RBP26.78■■□□□ 1.88
LTBP3-211ENST00000528966 COL14A1Q05707 1796 aaKnown RBP26.78■■□□□ 1.88
LTBP3-211ENST00000528966 THSD7AQ9UPZ6 1657 aa26.77■■□□□ 1.88
LTBP3-211ENST00000528966 ALS2Q96Q42 1657 aa26.75■■□□□ 1.87
LTBP3-211ENST00000528966 SPATA31A5Q5VU36 1347 aa26.73■■□□□ 1.87
LTBP3-211ENST00000528966 SPATA31A7Q8IWB4 1347 aa26.73■■□□□ 1.87
LTBP3-211ENST00000528966 PMFBP1Q8TBY8 1022 aa26.73■■□□□ 1.87
LTBP3-211ENST00000528966 EZH2Q15910 746 aaKnown RBP26.72■■□□□ 1.87
LTBP3-211ENST00000528966 SAFB2Q14151 953 aaKnown RBP eCLIP26.71■■□□□ 1.87
LTBP3-211ENST00000528966 ANKARQ7Z5J8 1434 aa26.71■■□□□ 1.87
LTBP3-211ENST00000528966 CRYBG1Q9Y4K1 1723 aa26.7■■□□□ 1.87
LTBP3-211ENST00000528966 C14orf93Q9H972 538 aaKnown RBP26.7■■□□□ 1.86
LTBP3-211ENST00000528966 ADGRB2O60241 1585 aa26.69■■□□□ 1.86
LTBP3-211ENST00000528966 PRAM1Q96QH2 718 aa26.69■■□□□ 1.86
LTBP3-211ENST00000528966 CAMKK2Q96RR4 588 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms