RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 ORAI2Q96SN7 254 aa23.24■■□□□ 1.31
CTSB-215ENST00000528965 SOS2Q07890 1332 aaPredicted RBP23.24■■□□□ 1.31
CTSB-215ENST00000528965 LRPPRCP42704 1394 aaKnown RBP23.23■■□□□ 1.31
CTSB-215ENST00000528965 PIK3C2GO75747 1445 aa23.22■■□□□ 1.31
CTSB-215ENST00000528965 NPHP3Q7Z494 1330 aa23.21■■□□□ 1.31
CTSB-215ENST00000528965 KNDC1Q76NI1 1749 aa23.2■■□□□ 1.3
CTSB-215ENST00000528965 STK26Q9P289 416 aa23.19■■□□□ 1.3
CTSB-215ENST00000528965 ABCC11Q96J66 1382 aa23.18■■□□□ 1.3
CTSB-215ENST00000528965 ESCO1Q5FWF5 840 aa23.18■■□□□ 1.3
CTSB-215ENST00000528965 NGLY1Q96IV0 654 aa23.18■■□□□ 1.3
CTSB-215ENST00000528965 ADAMTS2O95450 1211 aa23.17■■□□□ 1.3
CTSB-215ENST00000528965 RBM6P78332 1123 aaKnown RBP23.17■■□□□ 1.3
CTSB-215ENST00000528965 COL22A1Q8NFW1 1626 aaPredicted RBP23.16■■□□□ 1.3
CTSB-215ENST00000528965 UPF1Q92900 1129 aaKnown RBP eCLIP23.15■■□□□ 1.3
CTSB-215ENST00000528965 QTRT2Q9H974 415 aaKnown RBP23.15■■□□□ 1.3
CTSB-215ENST00000528965 YTHDC2Q9H6S0 1430 aaKnown RBP23.15■■□□□ 1.3
CTSB-215ENST00000528965 MYOM2P54296 1465 aa23.14■■□□□ 1.29
CTSB-215ENST00000528965 PXDNQ92626 1479 aa23.13■■□□□ 1.29
CTSB-215ENST00000528965 WAPLQ7Z5K2 1190 aa23.13■■□□□ 1.29
CTSB-215ENST00000528965 RGS12O14924 1447 aa23.13■■□□□ 1.29
CTSB-215ENST00000528965 TMEM132EQ6IEE7 984 aa23.12■■□□□ 1.29
CTSB-215ENST00000528965 NRXN1Q9ULB1 1477 aa23.11■■□□□ 1.29
CTSB-215ENST00000528965 KIF1AQ12756 1690 aa23.1■■□□□ 1.29
CTSB-215ENST00000528965 PLEKHH1Q9ULM0 1364 aa23.1■■□□□ 1.29
CTSB-215ENST00000528965 FMN2Q9NZ56 1722 aa23.1■■□□□ 1.29
CTSB-215ENST00000528965 FOXO3O43524 673 aa23.09■■□□□ 1.29
CTSB-215ENST00000528965 USP21Q9UK80 565 aa23.09■■□□□ 1.29
CTSB-215ENST00000528965 SIRT1Q96EB6 747 aa23.08■■□□□ 1.29
CTSB-215ENST00000528965 C14orf93Q9H972 538 aaKnown RBP23.08■■□□□ 1.29
CTSB-215ENST00000528965 TRPC5Q9UL62 973 aaPredicted RBP23.08■■□□□ 1.29
CTSB-215ENST00000528965 DHX57Q6P158 1386 aaKnown RBP23.08■■□□□ 1.29
CTSB-215ENST00000528965 RAB3GAP2Q9H2M9 1393 aa23.07■■□□□ 1.28
CTSB-215ENST00000528965 NUTM2FA1L443 756 aa23.07■■□□□ 1.28
CTSB-215ENST00000528965 FNBP4Q8N3X1 1017 aaPredicted RBP23.06■■□□□ 1.28
CTSB-215ENST00000528965 XPCQ01831 940 aaPredicted RBP23.05■■□□□ 1.28
CTSB-215ENST00000528965 ATRNO75882 1429 aa23.03■■□□□ 1.28
CTSB-215ENST00000528965 ATAD2Q6PL18 1390 aa23.02■■□□□ 1.28
CTSB-215ENST00000528965 CFAP70Q5T0N1 1121 aa23.02■■□□□ 1.28
CTSB-215ENST00000528965 MARF1Q9Y4F3 1742 aaKnown RBP23.01■■□□□ 1.27
CTSB-215ENST00000528965 DLC1Q96QB1 1528 aa23.01■■□□□ 1.27
CTSB-215ENST00000528965 SPATA31A3Q5VYP0 1347 aa22.99■■□□□ 1.27
CTSB-215ENST00000528965 PRAM1Q96QH2 718 aa22.98■■□□□ 1.27
CTSB-215ENST00000528965 PSME1Q06323 249 aa22.97■■□□□ 1.27
CTSB-215ENST00000528965 POGKQ9P215 609 aa22.97■■□□□ 1.27
CTSB-215ENST00000528965 PHF8Q9UPP1 1060 aa22.97■■□□□ 1.27
CTSB-215ENST00000528965 TNS3Q68CZ2 1445 aa22.97■■□□□ 1.27
CTSB-215ENST00000528965 KRT28Q7Z3Y7 464 aa22.96■■□□□ 1.27
CTSB-215ENST00000528965 ANKARQ7Z5J8 1434 aa22.96■■□□□ 1.27
CTSB-215ENST00000528965 BCL9LQ86UU0 1499 aa22.96■■□□□ 1.27
CTSB-215ENST00000528965 ADGRB2O60241 1585 aa22.95■■□□□ 1.26
CTSB-215ENST00000528965 SAFB2Q14151 953 aaKnown RBP eCLIP22.95■■□□□ 1.26
CTSB-215ENST00000528965 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.94■■□□□ 1.26
CTSB-215ENST00000528965 USP32Q8NFA0 1604 aa22.94■■□□□ 1.26
CTSB-215ENST00000528965 EIF3AQ14152 1382 aaKnown RBP22.94■■□□□ 1.26
CTSB-215ENST00000528965 HAP1P54257 671 aaPredicted RBP22.94■■□□□ 1.26
CTSB-215ENST00000528965 ADGRB1O14514 1584 aa22.93■■□□□ 1.26
CTSB-215ENST00000528965 STAC3Q96MF2 364 aa22.93■■□□□ 1.26
CTSB-215ENST00000528965 SBNO1A3KN83 1393 aa22.92■■□□□ 1.26
CTSB-215ENST00000528965 ARHGEF10O15013 1369 aa22.92■■□□□ 1.26
CTSB-215ENST00000528965 SLIT2O94813 1529 aa22.91■■□□□ 1.26
CTSB-215ENST00000528965 UNC5CLQ8IV45 518 aa22.9■■□□□ 1.26
CTSB-215ENST00000528965 GJD4Q96KN9 370 aaPredicted RBP22.9■■□□□ 1.26
CTSB-215ENST00000528965 RGPD8O14715 1765 aaPredicted RBP22.89■■□□□ 1.26
CTSB-215ENST00000528965 HRCP23327 699 aa22.89■■□□□ 1.25
CTSB-215ENST00000528965 DCAF11Q8TEB1 546 aa22.89■■□□□ 1.25
CTSB-215ENST00000528965 TRAK1Q9UPV9 953 aa22.87■■□□□ 1.25
CTSB-215ENST00000528965 KDM2AQ9Y2K7 1162 aa22.87■■□□□ 1.25
CTSB-215ENST00000528965 LMOD2Q6P5Q4 547 aa22.86■■□□□ 1.25
CTSB-215ENST00000528965 RALGAPBQ86X10 1494 aa22.85■■□□□ 1.25
CTSB-215ENST00000528965 TULP4Q9NRJ4 1543 aa22.85■■□□□ 1.25
CTSB-215ENST00000528965 GPRASP1Q5JY77 1395 aa22.84■■□□□ 1.25
CTSB-215ENST00000528965 ABCA3Q99758 1704 aa22.83■■□□□ 1.25
CTSB-215ENST00000528965 CCDC125Q86Z20 511 aa22.83■■□□□ 1.25
CTSB-215ENST00000528965 PMFBP1Q8TBY8 1022 aa22.83■■□□□ 1.25
CTSB-215ENST00000528965 HIRIP3Q9BW71 556 aaPredicted RBP22.83■■□□□ 1.25
CTSB-215ENST00000528965 MINK1Q8N4C8 1332 aaPredicted RBP22.82■■□□□ 1.24
CTSB-215ENST00000528965 GLI3P10071 1580 aa22.82■■□□□ 1.24
CTSB-215ENST00000528965 NWD2Q9ULI1 1742 aa22.82■■□□□ 1.24
CTSB-215ENST00000528965 PLCH1Q4KWH8 1693 aa22.81■■□□□ 1.24
CTSB-215ENST00000528965 CABLES1Q8TDN4 633 aa22.81■■□□□ 1.24
CTSB-215ENST00000528965 PLEKHG5O94827 1062 aa22.8■■□□□ 1.24
CTSB-215ENST00000528965 WASLO00401 505 aaPredicted RBP22.79■■□□□ 1.24
CTSB-215ENST00000528965 VPS72Q15906 364 aa22.79■■□□□ 1.24
CTSB-215ENST00000528965 TRPM3Q9HCF6 1732 aaPredicted RBP22.78■■□□□ 1.24
CTSB-215ENST00000528965 CCDC9Q9Y3X0 531 aaKnown RBP22.77■■□□□ 1.24
CTSB-215ENST00000528965 ARHGEF28Q8N1W1 1705 aaKnown RBP22.77■■□□□ 1.23
CTSB-215ENST00000528965 NGDNQ8NEJ9 315 aaKnown RBP22.76■■□□□ 1.23
CTSB-215ENST00000528965 PRR36Q9H6K5 1346 aa22.76■■□□□ 1.23
CTSB-215ENST00000528965 ITSN1Q15811 1721 aa22.75■■□□□ 1.23
CTSB-215ENST00000528965 ALS2Q96Q42 1657 aa22.74■■□□□ 1.23
CTSB-215ENST00000528965 ZRANB1Q9UGI0 708 aa22.74■■□□□ 1.23
CTSB-215ENST00000528965 BLMP54132 1417 aaPredicted RBP22.74■■□□□ 1.23
CTSB-215ENST00000528965 ATP7BP35670 1465 aa22.73■■□□□ 1.23
CTSB-215ENST00000528965 EP400Q96L91 3159 aa22.72■■□□□ 1.23
CTSB-215ENST00000528965 SEPT12Q8IYM1 358 aa22.72■■□□□ 1.23
CTSB-215ENST00000528965 COL14A1Q05707 1796 aaKnown RBP22.71■■□□□ 1.23
CTSB-215ENST00000528965 KIAA1210Q9ULL0 1709 aa22.71■■□□□ 1.23
CTSB-215ENST00000528965 FAM83GA6ND36 823 aa22.7■■□□□ 1.22
CTSB-215ENST00000528965 SF3B2Q13435 895 aaKnown RBP22.7■■□□□ 1.22
CTSB-215ENST00000528965 NRAPQ86VF7 1730 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms