RNA–Protein interactions for RNA: ENST00000528853.1

PPFIA1-212, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-212ENST00000528853 PRDM9Q9NQV7 894 aa10.37□□□□□ -0.75
PPFIA1-212ENST00000528853 LCE2AQ5TA79 106 aaPredicted RBP10.36□□□□□ -0.75
PPFIA1-212ENST00000528853 BRICD5Q6PL45 260 aa10.36□□□□□ -0.75
PPFIA1-212ENST00000528853 DACH1Q9UI36 760 aa10.36□□□□□ -0.75
PPFIA1-212ENST00000528853 CLCN1P35523 988 aa10.35□□□□□ -0.75
PPFIA1-212ENST00000528853 MDM2Q00987 491 aaPredicted RBP10.35□□□□□ -0.75
PPFIA1-212ENST00000528853 CCDC102AQ96A19 550 aa10.35□□□□□ -0.75
PPFIA1-212ENST00000528853 AXIN1O15169 862 aa10.34□□□□□ -0.75
PPFIA1-212ENST00000528853 CD46P15529 392 aa10.34□□□□□ -0.75
PPFIA1-212ENST00000528853 USP46P62068 366 aa10.34□□□□□ -0.75
PPFIA1-212ENST00000528853 CTC1Q2NKJ3 1217 aa10.34□□□□□ -0.75
PPFIA1-212ENST00000528853 MSS51Q4VC12 460 aa10.34□□□□□ -0.75
PPFIA1-212ENST00000528853 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.34□□□□□ -0.75
PPFIA1-212ENST00000528853 KDM4AO75164 1064 aa10.33□□□□□ -0.76
PPFIA1-212ENST00000528853 GPCPD1Q9NPB8 672 aa10.33□□□□□ -0.76
PPFIA1-212ENST00000528853 ZBTB24O43167 697 aaPredicted RBP10.32□□□□□ -0.76
PPFIA1-212ENST00000528853 SMCPP49901 116 aaPredicted RBP10.32□□□□□ -0.76
PPFIA1-212ENST00000528853 GMPR2Q9P2T1 348 aaKnown RBP10.32□□□□□ -0.76
PPFIA1-212ENST00000528853 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
PPFIA1-212ENST00000528853 TTC24A2A3L6 582 aaPredicted RBP10.3□□□□□ -0.76
PPFIA1-212ENST00000528853 C11orf95C9JLR9 678 aaPredicted RBP10.3□□□□□ -0.76
PPFIA1-212ENST00000528853 WNT7AO00755 349 aa10.27□□□□□ -0.77
PPFIA1-212ENST00000528853 NUTM1Q86Y26 1132 aa10.27□□□□□ -0.77
PPFIA1-212ENST00000528853 WFS1O76024 890 aa10.26□□□□□ -0.77
PPFIA1-212ENST00000528853 TRIM32Q13049 653 aa10.26□□□□□ -0.77
PPFIA1-212ENST00000528853 SNIP1Q8TAD8 396 aaKnown RBP10.26□□□□□ -0.77
PPFIA1-212ENST00000528853 SMPD1P17405 629 aa10.25□□□□□ -0.77
PPFIA1-212ENST00000528853 MMP16P51512 607 aa10.25□□□□□ -0.77
PPFIA1-212ENST00000528853 USB1Q9BQ65 265 aaKnown RBP10.25□□□□□ -0.77
PPFIA1-212ENST00000528853 FAM217BQ9NTX9 383 aaPredicted RBP10.25□□□□□ -0.77
PPFIA1-212ENST00000528853 HOXA2O43364 376 aa10.23□□□□□ -0.77
PPFIA1-212ENST00000528853 TTLL12Q14166 644 aaPredicted RBP10.23□□□□□ -0.77
PPFIA1-212ENST00000528853 BARGINQ6ZT62 677 aa10.22□□□□□ -0.77
PPFIA1-212ENST00000528853 MRGPRX2Q96LB1 330 aa10.22□□□□□ -0.77
PPFIA1-212ENST00000528853 DXOO77932 396 aaKnown RBP10.21□□□□□ -0.77
PPFIA1-212ENST00000528853 NFX1Q12986 1120 aaKnown RBP10.21□□□□□ -0.77
PPFIA1-212ENST00000528853 ATP13A2Q9NQ11 1180 aa10.21□□□□□ -0.77
PPFIA1-212ENST00000528853 J3QL48 77 aa10.2□□□□□ -0.78
PPFIA1-212ENST00000528853 ZMYND10O75800 440 aa10.2□□□□□ -0.78
PPFIA1-212ENST00000528853 ZC3H15Q8WU90 426 aaKnown RBP10.19□□□□□ -0.78
PPFIA1-212ENST00000528853 REPIN1Q9BWE0 567 aaKnown RBP10.19□□□□□ -0.78
PPFIA1-212ENST00000528853 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
PPFIA1-212ENST00000528853 WIPF1O43516 503 aa10.17□□□□□ -0.78
PPFIA1-212ENST00000528853 SNRPBP14678 240 aaKnown RBP10.17□□□□□ -0.78
PPFIA1-212ENST00000528853 AMHR2Q16671 573 aa10.16□□□□□ -0.78
PPFIA1-212ENST00000528853 HPS1Q92902 700 aa10.16□□□□□ -0.78
PPFIA1-212ENST00000528853 TRIM47Q96LD4 638 aa10.16□□□□□ -0.78
PPFIA1-212ENST00000528853 SENP2Q9HC62 589 aa10.16□□□□□ -0.78
PPFIA1-212ENST00000528853 DIXDC1Q155Q3 683 aa10.15□□□□□ -0.78
PPFIA1-212ENST00000528853 RETREG3Q86VR2 466 aa10.15□□□□□ -0.78
PPFIA1-212ENST00000528853 CCDC24Q8N4L8 307 aa10.15□□□□□ -0.78
PPFIA1-212ENST00000528853 HLA-CQ95604 372 aa10.15□□□□□ -0.78
PPFIA1-212ENST00000528853 FDX1P10109 184 aa10.14□□□□□ -0.79
PPFIA1-212ENST00000528853 JUNDP17535 347 aa10.14□□□□□ -0.79
PPFIA1-212ENST00000528853 RC3H1Q5TC82 1133 aaKnown RBP10.14□□□□□ -0.79
PPFIA1-212ENST00000528853 STK17AQ9UEE5 414 aa10.14□□□□□ -0.79
PPFIA1-212ENST00000528853 C6orf229H3BNL8 230 aa10.13□□□□□ -0.79
PPFIA1-212ENST00000528853 WNT7BP56706 349 aa10.13□□□□□ -0.79
PPFIA1-212ENST00000528853 SKOR1P84550 965 aa10.13□□□□□ -0.79
PPFIA1-212ENST00000528853 INSM1Q01101 510 aaPredicted RBP10.13□□□□□ -0.79
PPFIA1-212ENST00000528853 TERTO14746 1132 aaKnown RBP10.12□□□□□ -0.79
PPFIA1-212ENST00000528853 GUCA2AQ02747 115 aa10.12□□□□□ -0.79
PPFIA1-212ENST00000528853 GIGYF2Q6Y7W6 1299 aaKnown RBP10.12□□□□□ -0.79
PPFIA1-212ENST00000528853 KIFC2Q96AC6 838 aa10.11□□□□□ -0.79
PPFIA1-212ENST00000528853 LCE2CQ5TA81 110 aa10.1□□□□□ -0.79
PPFIA1-212ENST00000528853 AK7Q96M32 723 aa10.1□□□□□ -0.79
PPFIA1-212ENST00000528853 SPIRE2Q8WWL2 714 aa10.09□□□□□ -0.79
PPFIA1-212ENST00000528853 SPDYE5A6NIY4 337 aa10.08□□□□□ -0.8
PPFIA1-212ENST00000528853 NUDT12Q9BQG2 462 aa10.08□□□□□ -0.8
PPFIA1-212ENST00000528853 BEGAINQ9BUH8 593 aa10.08□□□□□ -0.8
PPFIA1-212ENST00000528853 MS4A1P11836 297 aa10.07□□□□□ -0.8
PPFIA1-212ENST00000528853 SYMPKQ92797 1274 aaKnown RBP10.07□□□□□ -0.8
PPFIA1-212ENST00000528853 ALDH1A1P00352 501 aa10.06□□□□□ -0.8
PPFIA1-212ENST00000528853 TRIM66O15016 1216 aa10.05□□□□□ -0.8
PPFIA1-212ENST00000528853 GJA5P36382 358 aa10.05□□□□□ -0.8
PPFIA1-212ENST00000528853 MTMR2Q13614 643 aa10.05□□□□□ -0.8
PPFIA1-212ENST00000528853 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
PPFIA1-212ENST00000528853 CCNYL3P0C7X3 344 aa10.04□□□□□ -0.8
PPFIA1-212ENST00000528853 SIAH2O43255 324 aa10.03□□□□□ -0.8
PPFIA1-212ENST00000528853 PTPRNQ16849 979 aa10.03□□□□□ -0.8
PPFIA1-212ENST00000528853 PTCRAQ6ISU1 281 aaPredicted RBP10.03□□□□□ -0.8
PPFIA1-212ENST00000528853 PARP9Q8IXQ6 854 aa10.03□□□□□ -0.8
PPFIA1-212ENST00000528853 PCDHGC3Q9UN70 934 aa10.03□□□□□ -0.8
PPFIA1-212ENST00000528853 NDUFV2P19404 249 aa10.02□□□□□ -0.81
PPFIA1-212ENST00000528853 EHBP1Q8NDI1 1231 aa10.02□□□□□ -0.81
PPFIA1-212ENST00000528853 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
PPFIA1-212ENST00000528853 DESI1Q6ICB0 168 aa10.01□□□□□ -0.81
PPFIA1-212ENST00000528853 PRR7Q8TB68 274 aa10.01□□□□□ -0.81
PPFIA1-212ENST00000528853 SLC16A10Q8TF71 515 aa10□□□□□ -0.81
PPFIA1-212ENST00000528853 RSBN1LQ6PCB5 846 aaPredicted RBP9.99□□□□□ -0.81
PPFIA1-212ENST00000528853 WASF2Q9Y6W5 498 aa9.99□□□□□ -0.81
PPFIA1-212ENST00000528853 CAPN5O15484 640 aaPredicted RBP9.98□□□□□ -0.81
PPFIA1-212ENST00000528853 BMP1P13497 986 aa9.98□□□□□ -0.81
PPFIA1-212ENST00000528853 SH3BP2P78314 561 aa9.98□□□□□ -0.81
PPFIA1-212ENST00000528853 TRIM46Q7Z4K8 759 aa9.98□□□□□ -0.81
PPFIA1-212ENST00000528853 ZBTB3Q9H5J0 574 aa9.98□□□□□ -0.81
PPFIA1-212ENST00000528853 NXF1Q9UBU9 619 aaKnown RBP9.98□□□□□ -0.81
PPFIA1-212ENST00000528853 EVA1BQ9NVM1 165 aa9.97□□□□□ -0.81
PPFIA1-212ENST00000528853 SPTLC1O15269 473 aa9.96□□□□□ -0.82
PPFIA1-212ENST00000528853 PDE4DQ08499 809 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms