RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 DDX10Q13206 875 aaKnown RBP16.43■□□□□ 0.22
USF1-208ENST00000528768 FNBP4Q8N3X1 1017 aaPredicted RBP16.43■□□□□ 0.22
USF1-208ENST00000528768 ADGRL3Q9HAR2 1447 aa16.43■□□□□ 0.22
USF1-208ENST00000528768 ADAMTS2O95450 1211 aa16.42■□□□□ 0.22
USF1-208ENST00000528768 EIF4G2P78344 907 aaKnown RBP eCLIP16.42■□□□□ 0.22
USF1-208ENST00000528768 L3MBTL2Q969R5 705 aa16.41■□□□□ 0.22
USF1-208ENST00000528768 SETBP1Q9Y6X0 1596 aa16.41■□□□□ 0.22
USF1-208ENST00000528768 ATRNO75882 1429 aa16.4■□□□□ 0.22
USF1-208ENST00000528768 ANP32CO43423 234 aa16.4■□□□□ 0.22
USF1-208ENST00000528768 LAMC1P11047 1609 aa16.4■□□□□ 0.22
USF1-208ENST00000528768 NUP155O75694 1391 aa16.39■□□□□ 0.21
USF1-208ENST00000528768 SOS2Q07890 1332 aaPredicted RBP16.39■□□□□ 0.21
USF1-208ENST00000528768 EP400Q96L91 3159 aa16.37■□□□□ 0.21
USF1-208ENST00000528768 E9PCH4 1651 aa16.37■□□□□ 0.21
USF1-208ENST00000528768 C1orf167Q5SNV9 1468 aa16.36■□□□□ 0.21
USF1-208ENST00000528768 CCER2I3L3R5 266 aa16.36■□□□□ 0.21
USF1-208ENST00000528768 DDX17Q92841 729 aaKnown RBP16.36■□□□□ 0.21
USF1-208ENST00000528768 IQGAP3Q86VI3 1631 aa16.36■□□□□ 0.21
USF1-208ENST00000528768 GTF3C3Q9Y5Q9 886 aa16.35■□□□□ 0.21
USF1-208ENST00000528768 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
USF1-208ENST00000528768 HSPA5P11021 654 aaKnown RBP16.34■□□□□ 0.21
USF1-208ENST00000528768 BLMP54132 1417 aaPredicted RBP16.34■□□□□ 0.21
USF1-208ENST00000528768 COL22A1Q8NFW1 1626 aaPredicted RBP16.34■□□□□ 0.21
USF1-208ENST00000528768 METP08581 1390 aa16.33■□□□□ 0.2
USF1-208ENST00000528768 NALCNQ8IZF0 1738 aa16.32■□□□□ 0.2
USF1-208ENST00000528768 GJD4Q96KN9 370 aaPredicted RBP16.31■□□□□ 0.2
USF1-208ENST00000528768 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
USF1-208ENST00000528768 LRP5O75197 1615 aa16.3■□□□□ 0.2
USF1-208ENST00000528768 SF3B2Q13435 895 aaKnown RBP16.3■□□□□ 0.2
USF1-208ENST00000528768 ZNF326Q5BKZ1 582 aaKnown RBP16.3■□□□□ 0.2
USF1-208ENST00000528768 MYOM2P54296 1465 aa16.29■□□□□ 0.2
USF1-208ENST00000528768 BCL9LQ86UU0 1499 aa16.29■□□□□ 0.2
USF1-208ENST00000528768 NPHP3Q7Z494 1330 aa16.28■□□□□ 0.2
USF1-208ENST00000528768 ORAI2Q96SN7 254 aa16.27■□□□□ 0.2
USF1-208ENST00000528768 PRAG1Q86YV5 1406 aa16.26■□□□□ 0.19
USF1-208ENST00000528768 SPHKAPQ2M3C7 1700 aa16.25■□□□□ 0.19
USF1-208ENST00000528768 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.25■□□□□ 0.19
USF1-208ENST00000528768 MARF1Q9Y4F3 1742 aaKnown RBP16.25■□□□□ 0.19
USF1-208ENST00000528768 LRPPRCP42704 1394 aaKnown RBP16.25■□□□□ 0.19
USF1-208ENST00000528768 UNC5CLQ8IV45 518 aa16.24■□□□□ 0.19
USF1-208ENST00000528768 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
USF1-208ENST00000528768 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
USF1-208ENST00000528768 RALGAPBQ86X10 1494 aa16.21■□□□□ 0.19
USF1-208ENST00000528768 WASHC2AQ641Q2 1341 aa16.2■□□□□ 0.18
USF1-208ENST00000528768 NEXMIFQ5QGS0 1516 aa16.2■□□□□ 0.18
USF1-208ENST00000528768 ESCO1Q5FWF5 840 aa16.2■□□□□ 0.18
USF1-208ENST00000528768 CCDC7Q96M83 1385 aa16.2■□□□□ 0.18
USF1-208ENST00000528768 ROBO2Q9HCK4 1378 aa16.2■□□□□ 0.18
USF1-208ENST00000528768 PXDNQ92626 1479 aa16.2■□□□□ 0.18
USF1-208ENST00000528768 CCDC144AA2RUR9 1427 aa16.19■□□□□ 0.18
USF1-208ENST00000528768 SLIT2O94813 1529 aa16.19■□□□□ 0.18
USF1-208ENST00000528768 DEFB132Q7Z7B7 95 aa16.19■□□□□ 0.18
USF1-208ENST00000528768 GLI3P10071 1580 aa16.17■□□□□ 0.18
USF1-208ENST00000528768 CDC42BPGQ6DT37 1551 aa16.17■□□□□ 0.18
USF1-208ENST00000528768 BAG6P46379 1132 aa16.17■□□□□ 0.18
USF1-208ENST00000528768 SPATA31E1Q6ZUB1 1445 aa16.17■□□□□ 0.18
USF1-208ENST00000528768 ONECUT3O60422 494 aaPredicted RBP16.16■□□□□ 0.18
USF1-208ENST00000528768 SEPT12Q8IYM1 358 aa16.16■□□□□ 0.18
USF1-208ENST00000528768 FOXO3O43524 673 aa16.15■□□□□ 0.18
USF1-208ENST00000528768 VPS72Q15906 364 aa16.15■□□□□ 0.18
USF1-208ENST00000528768 RPGRIP1LQ68CZ1 1315 aa16.15■□□□□ 0.18
USF1-208ENST00000528768 USP47Q96K76 1375 aa16.14■□□□□ 0.17
USF1-208ENST00000528768 KRT27Q7Z3Y8 459 aa16.14■□□□□ 0.17
USF1-208ENST00000528768 ROCK2O75116 1388 aaKnown RBP16.13■□□□□ 0.17
USF1-208ENST00000528768 DCAF11Q8TEB1 546 aa16.13■□□□□ 0.17
USF1-208ENST00000528768 CARD11Q9BXL7 1154 aa16.13■□□□□ 0.17
USF1-208ENST00000528768 KIF1BO60333 1816 aa16.12■□□□□ 0.17
USF1-208ENST00000528768 BRWD3Q6RI45 1802 aa16.12■□□□□ 0.17
USF1-208ENST00000528768 SPATA31A3Q5VYP0 1347 aa16.12■□□□□ 0.17
USF1-208ENST00000528768 STAC3Q96MF2 364 aa16.11■□□□□ 0.17
USF1-208ENST00000528768 CLTCL1P53675 1640 aa16.11■□□□□ 0.17
USF1-208ENST00000528768 USP32Q8NFA0 1604 aa16.11■□□□□ 0.17
USF1-208ENST00000528768 KDM2AQ9Y2K7 1162 aa16.1■□□□□ 0.17
USF1-208ENST00000528768 KIF7Q2M1P5 1343 aa16.1■□□□□ 0.17
USF1-208ENST00000528768 PSDA5PKW4 1024 aaPredicted RBP16.09■□□□□ 0.17
USF1-208ENST00000528768 HAP1P54257 671 aaPredicted RBP16.09■□□□□ 0.17
USF1-208ENST00000528768 XPCQ01831 940 aaPredicted RBP16.09■□□□□ 0.17
USF1-208ENST00000528768 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
USF1-208ENST00000528768 NWD2Q9ULI1 1742 aa16.08■□□□□ 0.17
USF1-208ENST00000528768 CCDC9Q9Y3X0 531 aaKnown RBP16.08■□□□□ 0.16
USF1-208ENST00000528768 KIF1AQ12756 1690 aa16.08■□□□□ 0.16
USF1-208ENST00000528768 PSME1Q06323 249 aa16.07■□□□□ 0.16
USF1-208ENST00000528768 C11orf95C9JLR9 678 aaPredicted RBP16.05■□□□□ 0.16
USF1-208ENST00000528768 KRT28Q7Z3Y7 464 aa16.05■□□□□ 0.16
USF1-208ENST00000528768 DISP2A7MBM2 1401 aa16.04■□□□□ 0.16
USF1-208ENST00000528768 TECPR2O15040 1411 aa16.04■□□□□ 0.16
USF1-208ENST00000528768 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
USF1-208ENST00000528768 ARHGEF10O15013 1369 aa16.03■□□□□ 0.16
USF1-208ENST00000528768 RGPD1P0DJD0 1748 aa16.03■□□□□ 0.16
USF1-208ENST00000528768 A0A0G2JS52 829 aa16.03■□□□□ 0.16
USF1-208ENST00000528768 YY1P25490 414 aa16.03■□□□□ 0.16
USF1-208ENST00000528768 MYT1Q01538 1121 aa16.03■□□□□ 0.16
USF1-208ENST00000528768 PRKRIP1Q9H875 184 aaPredicted RBP16.03■□□□□ 0.16
USF1-208ENST00000528768 PLCH1Q4KWH8 1693 aa16.02■□□□□ 0.16
USF1-208ENST00000528768 SBNO1A3KN83 1393 aa16.01■□□□□ 0.15
USF1-208ENST00000528768 R3HDM1Q15032 1099 aaKnown RBP16.01■□□□□ 0.15
USF1-208ENST00000528768 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
USF1-208ENST00000528768 ABCC11Q96J66 1382 aa16■□□□□ 0.15
USF1-208ENST00000528768 NEFLP07196 543 aa16■□□□□ 0.15
USF1-208ENST00000528768 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms