RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 RRAGDQ9NQL2 400 aaPredicted RBP12.56□□□□□ -0.4
SF3B2-206ENST00000528302 FANCAO15360 1455 aa12.56□□□□□ -0.4
SF3B2-206ENST00000528302 DUOX2Q9NRD8 1548 aa12.54□□□□□ -0.4
SF3B2-206ENST00000528302 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-206ENST00000528302 NAP1L5Q96NT1 182 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-206ENST00000528302 SMC4Q9NTJ3 1288 aa12.54□□□□□ -0.4
SF3B2-206ENST00000528302 TRMT2AQ8IZ69 625 aaKnown RBP12.54□□□□□ -0.4
SF3B2-206ENST00000528302 FBLN1P23142 703 aa12.53□□□□□ -0.4
SF3B2-206ENST00000528302 PRDM15P57071 1507 aaPredicted RBP12.53□□□□□ -0.4
SF3B2-206ENST00000528302 KANK1Q14678 1352 aa12.53□□□□□ -0.4
SF3B2-206ENST00000528302 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
SF3B2-206ENST00000528302 ELL2O00472 640 aaPredicted RBP12.53□□□□□ -0.4
SF3B2-206ENST00000528302 PDE3AQ14432 1141 aa12.53□□□□□ -0.4
SF3B2-206ENST00000528302 MAPK8IP3Q9UPT6 1336 aa12.53□□□□□ -0.4
SF3B2-206ENST00000528302 EIF3AQ14152 1382 aaKnown RBP12.52□□□□□ -0.41
SF3B2-206ENST00000528302 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.41
SF3B2-206ENST00000528302 SHROOM2Q13796 1616 aa12.52□□□□□ -0.41
SF3B2-206ENST00000528302 LNPKQ9C0E8 428 aa12.52□□□□□ -0.41
SF3B2-206ENST00000528302 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
SF3B2-206ENST00000528302 EXOSC9Q06265 439 aaKnown RBP12.51□□□□□ -0.41
SF3B2-206ENST00000528302 CYB5RLQ6IPT4 315 aa12.51□□□□□ -0.41
SF3B2-206ENST00000528302 RUNDC1Q96C34 613 aa12.51□□□□□ -0.41
SF3B2-206ENST00000528302 GGNBP2Q9H3C7 697 aa12.51□□□□□ -0.41
SF3B2-206ENST00000528302 RWDD1Q9H446 243 aaPredicted RBP12.51□□□□□ -0.41
SF3B2-206ENST00000528302 ASXL2Q76L83 1435 aa12.51□□□□□ -0.41
SF3B2-206ENST00000528302 PMFBP1Q8TBY8 1022 aa12.51□□□□□ -0.41
SF3B2-206ENST00000528302 C1orf115Q9H7X2 142 aa12.51□□□□□ -0.41
SF3B2-206ENST00000528302 ABCC1P33527 1531 aa12.51□□□□□ -0.41
SF3B2-206ENST00000528302 NSD3Q9BZ95 1437 aa12.51□□□□□ -0.41
SF3B2-206ENST00000528302 MAST1Q9Y2H9 1570 aa12.5□□□□□ -0.41
SF3B2-206ENST00000528302 ATP10AO60312 1499 aa12.5□□□□□ -0.41
SF3B2-206ENST00000528302 HSP90AA1P07900 732 aaKnown RBP12.5□□□□□ -0.41
SF3B2-206ENST00000528302 MLECQ14165 292 aa12.5□□□□□ -0.41
SF3B2-206ENST00000528302 C22orf23Q9BZE7 217 aa12.5□□□□□ -0.41
SF3B2-206ENST00000528302 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
SF3B2-206ENST00000528302 GOLGA6L3A6NEY3 463 aa12.49□□□□□ -0.41
SF3B2-206ENST00000528302 XRCC6P12956 609 aaKnown RBP eCLIP12.49□□□□□ -0.41
SF3B2-206ENST00000528302 TBC1D32Q96NH3 1257 aa12.49□□□□□ -0.41
SF3B2-206ENST00000528302 SCAF11Q99590 1463 aaKnown RBP12.49□□□□□ -0.41
SF3B2-206ENST00000528302 UNC13BO14795 1591 aa12.49□□□□□ -0.41
SF3B2-206ENST00000528302 DZIP1LQ8IYY4 767 aaKnown RBP12.49□□□□□ -0.41
SF3B2-206ENST00000528302 IQGAP3Q86VI3 1631 aa12.48□□□□□ -0.41
SF3B2-206ENST00000528302 CFAP53Q96M91 514 aa12.48□□□□□ -0.41
SF3B2-206ENST00000528302 FAM43AQ8N2R8 423 aa12.47□□□□□ -0.41
SF3B2-206ENST00000528302 ZKSCAN2Q63HK3 967 aa12.47□□□□□ -0.41
SF3B2-206ENST00000528302 NOB1Q9ULX3 412 aaKnown RBP12.47□□□□□ -0.41
SF3B2-206ENST00000528302 TRAK2O60296 914 aa12.47□□□□□ -0.41
SF3B2-206ENST00000528302 MCM4P33991 863 aa12.47□□□□□ -0.41
SF3B2-206ENST00000528302 SRPK2P78362 688 aaKnown RBP12.47□□□□□ -0.41
SF3B2-206ENST00000528302 ANTXR1Q9H6X2 564 aa12.47□□□□□ -0.41
SF3B2-206ENST00000528302 APBB1O00213 710 aa12.46□□□□□ -0.41
SF3B2-206ENST00000528302 SSH1Q8WYL5 1049 aa12.46□□□□□ -0.41
SF3B2-206ENST00000528302 THUMPD2Q9BTF0 503 aaKnown RBP12.46□□□□□ -0.41
SF3B2-206ENST00000528302 PIK3C2GO75747 1445 aa12.46□□□□□ -0.41
SF3B2-206ENST00000528302 INSRP06213 1382 aa12.46□□□□□ -0.42
SF3B2-206ENST00000528302 MVPQ14764 893 aaKnown RBP12.46□□□□□ -0.42
SF3B2-206ENST00000528302 TRIM27P14373 513 aa12.45□□□□□ -0.42
SF3B2-206ENST00000528302 CLASP1Q7Z460 1538 aa12.45□□□□□ -0.42
SF3B2-206ENST00000528302 CLTCL1P53675 1640 aa12.45□□□□□ -0.42
SF3B2-206ENST00000528302 HSCBQ8IWL3 235 aa12.45□□□□□ -0.42
SF3B2-206ENST00000528302 NOS1P29475 1434 aa12.45□□□□□ -0.42
SF3B2-206ENST00000528302 PLXNC1O60486 1568 aa12.45□□□□□ -0.42
SF3B2-206ENST00000528302 ATP7AQ04656 1500 aa12.45□□□□□ -0.42
SF3B2-206ENST00000528302 ZFYVE16Q7Z3T8 1539 aa12.45□□□□□ -0.42
SF3B2-206ENST00000528302 TMEM57Q8N5G2 664 aa12.45□□□□□ -0.42
SF3B2-206ENST00000528302 TAF7LQ5H9L4 462 aa12.44□□□□□ -0.42
SF3B2-206ENST00000528302 HSP90AB1P08238 724 aaKnown RBP12.44□□□□□ -0.42
SF3B2-206ENST00000528302 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
SF3B2-206ENST00000528302 RBM42Q9BTD8 480 aaKnown RBP12.44□□□□□ -0.42
SF3B2-206ENST00000528302 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
SF3B2-206ENST00000528302 ZBTB7CA1YPR0 619 aa12.43□□□□□ -0.42
SF3B2-206ENST00000528302 PNNQ9H307 717 aaKnown RBP12.43□□□□□ -0.42
SF3B2-206ENST00000528302 BRD2P25440 801 aaKnown RBP12.42□□□□□ -0.42
SF3B2-206ENST00000528302 RIPK4P57078 832 aa12.42□□□□□ -0.42
SF3B2-206ENST00000528302 ANKRD45Q5TZF3 282 aa12.42□□□□□ -0.42
SF3B2-206ENST00000528302 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.42□□□□□ -0.42
SF3B2-206ENST00000528302 MINK1Q8N4C8 1332 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-206ENST00000528302 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
SF3B2-206ENST00000528302 CD109Q6YHK3 1445 aa12.42□□□□□ -0.42
SF3B2-206ENST00000528302 HMOX1P09601 288 aa12.42□□□□□ -0.42
SF3B2-206ENST00000528302 NCLP19338 710 aaKnown RBP12.42□□□□□ -0.42
SF3B2-206ENST00000528302 FBXO31Q5XUX0 539 aaPredicted RBP12.41□□□□□ -0.42
SF3B2-206ENST00000528302 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
SF3B2-206ENST00000528302 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
SF3B2-206ENST00000528302 ERVK-7P63135 1459 aa12.41□□□□□ -0.42
SF3B2-206ENST00000528302 CHMP5Q9NZZ3 219 aa12.41□□□□□ -0.42
SF3B2-206ENST00000528302 EIF2AK4Q9P2K8 1649 aaKnown RBP12.4□□□□□ -0.42
SF3B2-206ENST00000528302 CDK11BP21127 795 aaKnown RBP12.4□□□□□ -0.42
SF3B2-206ENST00000528302 FOXD4L5Q5VV16 416 aaPredicted RBP12.4□□□□□ -0.43
SF3B2-206ENST00000528302 CNKSR2Q8WXI2 1034 aa12.4□□□□□ -0.43
SF3B2-206ENST00000528302 FOXD4L4Q8WXT5 416 aaPredicted RBP12.4□□□□□ -0.43
SF3B2-206ENST00000528302 ARID3AQ99856 593 aa12.39□□□□□ -0.43
SF3B2-206ENST00000528302 SPHKAPQ2M3C7 1700 aa12.39□□□□□ -0.43
SF3B2-206ENST00000528302 MADDQ8WXG6 1647 aa12.39□□□□□ -0.43
SF3B2-206ENST00000528302 UHRF1BP1LA0JNW5 1464 aa12.38□□□□□ -0.43
SF3B2-206ENST00000528302 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
SF3B2-206ENST00000528302 WDR63Q8IWG1 891 aa12.38□□□□□ -0.43
SF3B2-206ENST00000528302 CD2BP2O95400 341 aaKnown RBP12.38□□□□□ -0.43
SF3B2-206ENST00000528302 TMPOP42166 694 aaKnown RBP12.38□□□□□ -0.43
SF3B2-206ENST00000528302 IDI1Q13907 227 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms