RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 RGL3Q3MIN7 710 aa23.5■■□□□ 1.35
CTTN-212ENST00000527962 ANKRD30BQ9BXX2 1392 aa23.5■■□□□ 1.35
CTTN-212ENST00000527962 RGS12O14924 1447 aa23.5■■□□□ 1.35
CTTN-212ENST00000527962 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
CTTN-212ENST00000527962 LAMC1P11047 1609 aa23.48■■□□□ 1.35
CTTN-212ENST00000527962 FOXD1Q16676 465 aa23.48■■□□□ 1.35
CTTN-212ENST00000527962 FNBP4Q8N3X1 1017 aaPredicted RBP23.48■■□□□ 1.35
CTTN-212ENST00000527962 STK26Q9P289 416 aa23.48■■□□□ 1.35
CTTN-212ENST00000527962 ADGRF5Q8IZF2 1346 aa23.46■■□□□ 1.35
CTTN-212ENST00000527962 ATAD2Q6PL18 1390 aa23.45■■□□□ 1.34
CTTN-212ENST00000527962 FOXO3O43524 673 aa23.45■■□□□ 1.34
CTTN-212ENST00000527962 MPHOSPH9Q99550 1183 aa23.45■■□□□ 1.34
CTTN-212ENST00000527962 PPLO60437 1756 aa23.44■■□□□ 1.34
CTTN-212ENST00000527962 CDC42BPGQ6DT37 1551 aa23.43■■□□□ 1.34
CTTN-212ENST00000527962 ABCC11Q96J66 1382 aa23.42■■□□□ 1.34
CTTN-212ENST00000527962 WAPLQ7Z5K2 1190 aa23.42■■□□□ 1.34
CTTN-212ENST00000527962 TECPR2O15040 1411 aa23.41■■□□□ 1.34
CTTN-212ENST00000527962 NUTM2FA1L443 756 aa23.39■■□□□ 1.33
CTTN-212ENST00000527962 XPCQ01831 940 aaPredicted RBP23.39■■□□□ 1.33
CTTN-212ENST00000527962 TMEM132EQ6IEE7 984 aa23.39■■□□□ 1.33
CTTN-212ENST00000527962 SPATA31E1Q6ZUB1 1445 aa23.39■■□□□ 1.33
CTTN-212ENST00000527962 MYOM2P54296 1465 aa23.37■■□□□ 1.33
CTTN-212ENST00000527962 ATRNO75882 1429 aa23.37■■□□□ 1.33
CTTN-212ENST00000527962 SIRT1Q96EB6 747 aa23.37■■□□□ 1.33
CTTN-212ENST00000527962 COL22A1Q8NFW1 1626 aaPredicted RBP23.37■■□□□ 1.33
CTTN-212ENST00000527962 PXDNQ92626 1479 aa23.36■■□□□ 1.33
CTTN-212ENST00000527962 CCDC125Q86Z20 511 aa23.36■■□□□ 1.33
CTTN-212ENST00000527962 PIK3C2GO75747 1445 aa23.34■■□□□ 1.33
CTTN-212ENST00000527962 HAP1P54257 671 aaPredicted RBP23.33■■□□□ 1.33
CTTN-212ENST00000527962 PSME1Q06323 249 aa23.33■■□□□ 1.33
CTTN-212ENST00000527962 GJD4Q96KN9 370 aaPredicted RBP23.33■■□□□ 1.33
CTTN-212ENST00000527962 YTHDC2Q9H6S0 1430 aaKnown RBP23.33■■□□□ 1.32
CTTN-212ENST00000527962 DHX57Q6P158 1386 aaKnown RBP23.32■■□□□ 1.32
CTTN-212ENST00000527962 C14orf93Q9H972 538 aaKnown RBP23.32■■□□□ 1.32
CTTN-212ENST00000527962 SPATA31A3Q5VYP0 1347 aa23.32■■□□□ 1.32
CTTN-212ENST00000527962 BCL9LQ86UU0 1499 aa23.31■■□□□ 1.32
CTTN-212ENST00000527962 KRT28Q7Z3Y7 464 aa23.31■■□□□ 1.32
CTTN-212ENST00000527962 PLEKHH1Q9ULM0 1364 aa23.3■■□□□ 1.32
CTTN-212ENST00000527962 UNC5CLQ8IV45 518 aa23.3■■□□□ 1.32
CTTN-212ENST00000527962 ZRANB1Q9UGI0 708 aa23.3■■□□□ 1.32
CTTN-212ENST00000527962 PHF8Q9UPP1 1060 aa23.28■■□□□ 1.32
CTTN-212ENST00000527962 POGKQ9P215 609 aa23.26■■□□□ 1.31
CTTN-212ENST00000527962 CFAP70Q5T0N1 1121 aa23.25■■□□□ 1.31
CTTN-212ENST00000527962 KIF1AQ12756 1690 aa23.24■■□□□ 1.31
CTTN-212ENST00000527962 KNDC1Q76NI1 1749 aa23.24■■□□□ 1.31
CTTN-212ENST00000527962 LMOD2Q6P5Q4 547 aa23.23■■□□□ 1.31
CTTN-212ENST00000527962 PRAM1Q96QH2 718 aa23.23■■□□□ 1.31
CTTN-212ENST00000527962 IFT172Q9UG01 1749 aa23.22■■□□□ 1.31
CTTN-212ENST00000527962 SAFB2Q14151 953 aaKnown RBP eCLIP23.21■■□□□ 1.31
CTTN-212ENST00000527962 ARHGEF10O15013 1369 aa23.21■■□□□ 1.31
CTTN-212ENST00000527962 FMN2Q9NZ56 1722 aa23.2■■□□□ 1.3
CTTN-212ENST00000527962 SLIT2O94813 1529 aa23.2■■□□□ 1.3
CTTN-212ENST00000527962 TNS3Q68CZ2 1445 aa23.2■■□□□ 1.3
CTTN-212ENST00000527962 SBNO1A3KN83 1393 aa23.2■■□□□ 1.3
CTTN-212ENST00000527962 SF3B2Q13435 895 aaKnown RBP23.19■■□□□ 1.3
CTTN-212ENST00000527962 RALGAPBQ86X10 1494 aa23.18■■□□□ 1.3
CTTN-212ENST00000527962 NRXN1Q9ULB1 1477 aa23.18■■□□□ 1.3
CTTN-212ENST00000527962 CCDC9Q9Y3X0 531 aaKnown RBP23.18■■□□□ 1.3
CTTN-212ENST00000527962 MARF1Q9Y4F3 1742 aaKnown RBP23.18■■□□□ 1.3
CTTN-212ENST00000527962 VPS72Q15906 364 aa23.17■■□□□ 1.3
CTTN-212ENST00000527962 PLEKHG5O94827 1062 aa23.16■■□□□ 1.3
CTTN-212ENST00000527962 CABLES1Q8TDN4 633 aa23.16■■□□□ 1.3
CTTN-212ENST00000527962 EIF3AQ14152 1382 aaKnown RBP23.15■■□□□ 1.3
CTTN-212ENST00000527962 STAC3Q96MF2 364 aa23.15■■□□□ 1.3
CTTN-212ENST00000527962 BLMP54132 1417 aaPredicted RBP23.15■■□□□ 1.3
CTTN-212ENST00000527962 ANKARQ7Z5J8 1434 aa23.15■■□□□ 1.3
CTTN-212ENST00000527962 SRCAPQ6ZRS2 3230 aa23.14■■□□□ 1.3
CTTN-212ENST00000527962 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.14■■□□□ 1.3
CTTN-212ENST00000527962 SEPT12Q8IYM1 358 aa23.14■■□□□ 1.29
CTTN-212ENST00000527962 GPRASP1Q5JY77 1395 aa23.14■■□□□ 1.29
CTTN-212ENST00000527962 USP32Q8NFA0 1604 aa23.13■■□□□ 1.29
CTTN-212ENST00000527962 PMFBP1Q8TBY8 1022 aa23.13■■□□□ 1.29
CTTN-212ENST00000527962 EP400Q96L91 3159 aa23.12■■□□□ 1.29
CTTN-212ENST00000527962 DLC1Q96QB1 1528 aa23.12■■□□□ 1.29
CTTN-212ENST00000527962 TRAK1Q9UPV9 953 aa23.11■■□□□ 1.29
CTTN-212ENST00000527962 ONECUT3O60422 494 aaPredicted RBP23.1■■□□□ 1.29
CTTN-212ENST00000527962 RAB3GAP2Q9H2M9 1393 aa23.1■■□□□ 1.29
CTTN-212ENST00000527962 A0A0G2JS52 829 aa23.09■■□□□ 1.29
CTTN-212ENST00000527962 MYT1Q01538 1121 aa23.09■■□□□ 1.29
CTTN-212ENST00000527962 KRT27Q7Z3Y8 459 aa23.09■■□□□ 1.29
CTTN-212ENST00000527962 DCAF11Q8TEB1 546 aa23.09■■□□□ 1.29
CTTN-212ENST00000527962 GLI3P10071 1580 aa23.09■■□□□ 1.29
CTTN-212ENST00000527962 FAM83GA6ND36 823 aa23.08■■□□□ 1.29
CTTN-212ENST00000527962 HIRIP3Q9BW71 556 aaPredicted RBP23.08■■□□□ 1.29
CTTN-212ENST00000527962 KDM2AQ9Y2K7 1162 aa23.08■■□□□ 1.29
CTTN-212ENST00000527962 MINK1Q8N4C8 1332 aaPredicted RBP23.07■■□□□ 1.28
CTTN-212ENST00000527962 NGDNQ8NEJ9 315 aaKnown RBP23.06■■□□□ 1.28
CTTN-212ENST00000527962 WASLO00401 505 aaPredicted RBP23.05■■□□□ 1.28
CTTN-212ENST00000527962 BTG4Q9NY30 223 aa23.04■■□□□ 1.28
CTTN-212ENST00000527962 ADGRB2O60241 1585 aa23.02■■□□□ 1.28
CTTN-212ENST00000527962 PAK3O75914 559 aaPredicted RBP23.02■■□□□ 1.28
CTTN-212ENST00000527962 DEFB132Q7Z7B7 95 aa23.02■■□□□ 1.28
CTTN-212ENST00000527962 NWD2Q9ULI1 1742 aa23.02■■□□□ 1.28
CTTN-212ENST00000527962 RGPD8O14715 1765 aaPredicted RBP23.01■■□□□ 1.27
CTTN-212ENST00000527962 ADGRB1O14514 1584 aa23.01■■□□□ 1.27
CTTN-212ENST00000527962 HRCP23327 699 aa23■■□□□ 1.27
CTTN-212ENST00000527962 BAG6P46379 1132 aa23■■□□□ 1.27
CTTN-212ENST00000527962 FAM98CQ17RN3 349 aaKnown RBP23■■□□□ 1.27
CTTN-212ENST00000527962 TULP4Q9NRJ4 1543 aa22.98■■□□□ 1.27
CTTN-212ENST00000527962 PRR36Q9H6K5 1346 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms