RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
NR1H3-230ENST00000527949 USP21Q9UK80 565 aa16.49■□□□□ 0.23
NR1H3-230ENST00000527949 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
NR1H3-230ENST00000527949 SOS2Q07890 1332 aaPredicted RBP16.48■□□□□ 0.23
NR1H3-230ENST00000527949 ADAMTS2O95450 1211 aa16.48■□□□□ 0.23
NR1H3-230ENST00000527949 FNBP4Q8N3X1 1017 aaPredicted RBP16.47■□□□□ 0.23
NR1H3-230ENST00000527949 ZRANB1Q9UGI0 708 aa16.47■□□□□ 0.23
NR1H3-230ENST00000527949 LAMC1P11047 1609 aa16.45■□□□□ 0.22
NR1H3-230ENST00000527949 DDX17Q92841 729 aaKnown RBP16.45■□□□□ 0.22
NR1H3-230ENST00000527949 TECPR2O15040 1411 aa16.44■□□□□ 0.22
NR1H3-230ENST00000527949 PIK3C2GO75747 1445 aa16.44■□□□□ 0.22
NR1H3-230ENST00000527949 NRXN1Q9ULB1 1477 aa16.43■□□□□ 0.22
NR1H3-230ENST00000527949 NALCNQ8IZF0 1738 aa16.43■□□□□ 0.22
NR1H3-230ENST00000527949 NPHP3Q7Z494 1330 aa16.43■□□□□ 0.22
NR1H3-230ENST00000527949 ADGRF5Q8IZF2 1346 aa16.43■□□□□ 0.22
NR1H3-230ENST00000527949 MYOM2P54296 1465 aa16.42■□□□□ 0.22
NR1H3-230ENST00000527949 ROBO2Q9HCK4 1378 aa16.42■□□□□ 0.22
NR1H3-230ENST00000527949 ORAI2Q96SN7 254 aa16.41■□□□□ 0.22
NR1H3-230ENST00000527949 ATRNO75882 1429 aa16.41■□□□□ 0.22
NR1H3-230ENST00000527949 LRPPRCP42704 1394 aaKnown RBP16.4■□□□□ 0.22
NR1H3-230ENST00000527949 ABCC11Q96J66 1382 aa16.4■□□□□ 0.22
NR1H3-230ENST00000527949 RGL3Q3MIN7 710 aa16.4■□□□□ 0.22
NR1H3-230ENST00000527949 STAC3Q96MF2 364 aa16.4■□□□□ 0.22
NR1H3-230ENST00000527949 KNDC1Q76NI1 1749 aa16.39■□□□□ 0.21
NR1H3-230ENST00000527949 SIRT1Q96EB6 747 aa16.38■□□□□ 0.21
NR1H3-230ENST00000527949 C14orf93Q9H972 538 aaKnown RBP16.37■□□□□ 0.21
NR1H3-230ENST00000527949 CDC42BPGQ6DT37 1551 aa16.37■□□□□ 0.21
NR1H3-230ENST00000527949 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
NR1H3-230ENST00000527949 ESCO1Q5FWF5 840 aa16.36■□□□□ 0.21
NR1H3-230ENST00000527949 GJD4Q96KN9 370 aaPredicted RBP16.35■□□□□ 0.21
NR1H3-230ENST00000527949 YTHDC2Q9H6S0 1430 aaKnown RBP16.34■□□□□ 0.21
NR1H3-230ENST00000527949 BCL9LQ86UU0 1499 aa16.34■□□□□ 0.21
NR1H3-230ENST00000527949 SRCAPQ6ZRS2 3230 aa16.32■□□□□ 0.2
NR1H3-230ENST00000527949 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
NR1H3-230ENST00000527949 DHX57Q6P158 1386 aaKnown RBP16.31■□□□□ 0.2
NR1H3-230ENST00000527949 FOXO3O43524 673 aa16.31■□□□□ 0.2
NR1H3-230ENST00000527949 DLC1Q96QB1 1528 aa16.3■□□□□ 0.2
NR1H3-230ENST00000527949 PXDNQ92626 1479 aa16.3■□□□□ 0.2
NR1H3-230ENST00000527949 SF3B2Q13435 895 aaKnown RBP16.3■□□□□ 0.2
NR1H3-230ENST00000527949 UNC5CLQ8IV45 518 aa16.3■□□□□ 0.2
NR1H3-230ENST00000527949 TMEM132EQ6IEE7 984 aa16.28■□□□□ 0.2
NR1H3-230ENST00000527949 ADGRB1O14514 1584 aa16.27■□□□□ 0.2
NR1H3-230ENST00000527949 CFAP70Q5T0N1 1121 aa16.27■□□□□ 0.2
NR1H3-230ENST00000527949 STK26Q9P289 416 aa16.26■□□□□ 0.19
NR1H3-230ENST00000527949 FMN2Q9NZ56 1722 aa16.25■□□□□ 0.19
NR1H3-230ENST00000527949 SPATA31A3Q5VYP0 1347 aa16.25■□□□□ 0.19
NR1H3-230ENST00000527949 WAPLQ7Z5K2 1190 aa16.25■□□□□ 0.19
NR1H3-230ENST00000527949 SLIT2O94813 1529 aa16.24■□□□□ 0.19
NR1H3-230ENST00000527949 RALGAPBQ86X10 1494 aa16.24■□□□□ 0.19
NR1H3-230ENST00000527949 PSME1Q06323 249 aa16.24■□□□□ 0.19
NR1H3-230ENST00000527949 PLEKHH1Q9ULM0 1364 aa16.24■□□□□ 0.19
NR1H3-230ENST00000527949 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.23■□□□□ 0.19
NR1H3-230ENST00000527949 HAP1P54257 671 aaPredicted RBP16.23■□□□□ 0.19
NR1H3-230ENST00000527949 XPCQ01831 940 aaPredicted RBP16.23■□□□□ 0.19
NR1H3-230ENST00000527949 ADGRB2O60241 1585 aa16.22■□□□□ 0.19
NR1H3-230ENST00000527949 KIF1AQ12756 1690 aa16.22■□□□□ 0.19
NR1H3-230ENST00000527949 VPS72Q15906 364 aa16.22■□□□□ 0.19
NR1H3-230ENST00000527949 DCAF11Q8TEB1 546 aa16.22■□□□□ 0.19
NR1H3-230ENST00000527949 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
NR1H3-230ENST00000527949 EP400Q96L91 3159 aa16.21■□□□□ 0.19
NR1H3-230ENST00000527949 ONECUT3O60422 494 aaPredicted RBP16.21■□□□□ 0.19
NR1H3-230ENST00000527949 KIAA1210Q9ULL0 1709 aa16.2■□□□□ 0.18
NR1H3-230ENST00000527949 KRT28Q7Z3Y7 464 aa16.2■□□□□ 0.18
NR1H3-230ENST00000527949 SEPT12Q8IYM1 358 aa16.2■□□□□ 0.18
NR1H3-230ENST00000527949 ANKARQ7Z5J8 1434 aa16.19■□□□□ 0.18
NR1H3-230ENST00000527949 GLI3P10071 1580 aa16.18■□□□□ 0.18
NR1H3-230ENST00000527949 ARHGEF10O15013 1369 aa16.18■□□□□ 0.18
NR1H3-230ENST00000527949 NUTM2FA1L443 756 aa16.18■□□□□ 0.18
NR1H3-230ENST00000527949 KRT27Q7Z3Y8 459 aa16.18■□□□□ 0.18
NR1H3-230ENST00000527949 PRAM1Q96QH2 718 aa16.18■□□□□ 0.18
NR1H3-230ENST00000527949 TNS3Q68CZ2 1445 aa16.18■□□□□ 0.18
NR1H3-230ENST00000527949 SBNO1A3KN83 1393 aa16.17■□□□□ 0.18
NR1H3-230ENST00000527949 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
NR1H3-230ENST00000527949 USP32Q8NFA0 1604 aa16.17■□□□□ 0.18
NR1H3-230ENST00000527949 BAG6P46379 1132 aa16.17■□□□□ 0.18
NR1H3-230ENST00000527949 KDM2AQ9Y2K7 1162 aa16.17■□□□□ 0.18
NR1H3-230ENST00000527949 DEFB132Q7Z7B7 95 aa16.16■□□□□ 0.18
NR1H3-230ENST00000527949 POGKQ9P215 609 aa16.16■□□□□ 0.18
NR1H3-230ENST00000527949 PHF8Q9UPP1 1060 aa16.16■□□□□ 0.18
NR1H3-230ENST00000527949 CCDC9Q9Y3X0 531 aaKnown RBP16.16■□□□□ 0.18
NR1H3-230ENST00000527949 LRP5O75197 1615 aa16.13■□□□□ 0.17
NR1H3-230ENST00000527949 ARHGEF28Q8N1W1 1705 aaKnown RBP16.13■□□□□ 0.17
NR1H3-230ENST00000527949 TRAK1Q9UPV9 953 aa16.12■□□□□ 0.17
NR1H3-230ENST00000527949 RGPD8O14715 1765 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-230ENST00000527949 NWD2Q9ULI1 1742 aa16.11■□□□□ 0.17
NR1H3-230ENST00000527949 TULP4Q9NRJ4 1543 aa16.11■□□□□ 0.17
NR1H3-230ENST00000527949 LMOD2Q6P5Q4 547 aa16.11■□□□□ 0.17
NR1H3-230ENST00000527949 A0A0G2JS52 829 aa16.1■□□□□ 0.17
NR1H3-230ENST00000527949 MYT1Q01538 1121 aa16.1■□□□□ 0.17
NR1H3-230ENST00000527949 WASLO00401 505 aaPredicted RBP16.09■□□□□ 0.17
NR1H3-230ENST00000527949 CABLES1Q8TDN4 633 aa16.09■□□□□ 0.17
NR1H3-230ENST00000527949 SAFB2Q14151 953 aaKnown RBP eCLIP16.08■□□□□ 0.16
NR1H3-230ENST00000527949 FAM83GA6ND36 823 aa16.07■□□□□ 0.16
NR1H3-230ENST00000527949 GPRASP1Q5JY77 1395 aa16.06■□□□□ 0.16
NR1H3-230ENST00000527949 MINK1Q8N4C8 1332 aaPredicted RBP16.06■□□□□ 0.16
NR1H3-230ENST00000527949 FAM98CQ17RN3 349 aaKnown RBP16.06■□□□□ 0.16
NR1H3-230ENST00000527949 BTG4Q9NY30 223 aa16.05■□□□□ 0.16
NR1H3-230ENST00000527949 ITSN1Q15811 1721 aa16.05■□□□□ 0.16
NR1H3-230ENST00000527949 PLCH1Q4KWH8 1693 aa16.05■□□□□ 0.16
NR1H3-230ENST00000527949 PRR36Q9H6K5 1346 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms