RNA–Protein interactions for RNA: ENST00000527840.1

SOX6-209, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-209ENST00000527840 GPIHBP1Q8IV16 184 aa9.18□□□□□ -0.94
SOX6-209ENST00000527840 TTC24A2A3L6 582 aaPredicted RBP9.17□□□□□ -0.94
SOX6-209ENST00000527840 MMP16P51512 607 aa9.17□□□□□ -0.94
SOX6-209ENST00000527840 GMPR2Q9P2T1 348 aaKnown RBP9.17□□□□□ -0.94
SOX6-209ENST00000527840 DACH1Q9UI36 760 aa9.17□□□□□ -0.94
SOX6-209ENST00000527840 TRIM32Q13049 653 aa9.16□□□□□ -0.94
SOX6-209ENST00000527840 C11orf95C9JLR9 678 aaPredicted RBP9.15□□□□□ -0.94
SOX6-209ENST00000527840 CD46P15529 392 aa9.15□□□□□ -0.94
SOX6-209ENST00000527840 SNIP1Q8TAD8 396 aaKnown RBP9.15□□□□□ -0.94
SOX6-209ENST00000527840 REPIN1Q9BWE0 567 aaKnown RBP9.15□□□□□ -0.94
SOX6-209ENST00000527840 WFS1O76024 890 aa9.14□□□□□ -0.95
SOX6-209ENST00000527840 DXOO77932 396 aaKnown RBP9.12□□□□□ -0.95
SOX6-209ENST00000527840 SMPD1P17405 629 aa9.12□□□□□ -0.95
SOX6-209ENST00000527840 USP46P62068 366 aa9.12□□□□□ -0.95
SOX6-209ENST00000527840 PLCB2Q00722 1185 aa9.12□□□□□ -0.95
SOX6-209ENST00000527840 USB1Q9BQ65 265 aaKnown RBP9.12□□□□□ -0.95
SOX6-209ENST00000527840 KDM4AO75164 1064 aa9.11□□□□□ -0.95
SOX6-209ENST00000527840 MAP2K5Q13163 448 aa9.11□□□□□ -0.95
SOX6-209ENST00000527840 NFX1Q12986 1120 aaKnown RBP9.1□□□□□ -0.95
SOX6-209ENST00000527840 MRGPRX2Q96LB1 330 aa9.1□□□□□ -0.95
SOX6-209ENST00000527840 SENP2Q9HC62 589 aa9.1□□□□□ -0.95
SOX6-209ENST00000527840 ATP13A2Q9NQ11 1180 aa9.1□□□□□ -0.95
SOX6-209ENST00000527840 WIPF1O43516 503 aa9.09□□□□□ -0.95
SOX6-209ENST00000527840 WNT7BP56706 349 aa9.08□□□□□ -0.96
SOX6-209ENST00000527840 TRIM47Q96LD4 638 aa9.08□□□□□ -0.96
SOX6-209ENST00000527840 STK17AQ9UEE5 414 aa9.07□□□□□ -0.96
SOX6-209ENST00000527840 J3QL48 77 aa9.06□□□□□ -0.96
SOX6-209ENST00000527840 INSM1Q01101 510 aaPredicted RBP9.06□□□□□ -0.96
SOX6-209ENST00000527840 KIFC2Q96AC6 838 aa9.06□□□□□ -0.96
SOX6-209ENST00000527840 HOXA2O43364 376 aa9.05□□□□□ -0.96
SOX6-209ENST00000527840 TULP1O00294 542 aaPredicted RBP9.03□□□□□ -0.96
SOX6-209ENST00000527840 IRF6O14896 467 aa9.03□□□□□ -0.96
SOX6-209ENST00000527840 RC3H1Q5TC82 1133 aaKnown RBP9.03□□□□□ -0.96
SOX6-209ENST00000527840 MINK1Q8N4C8 1332 aaPredicted RBP9.03□□□□□ -0.96
SOX6-209ENST00000527840 TERTO14746 1132 aaKnown RBP9.02□□□□□ -0.97
SOX6-209ENST00000527840 JUNDP17535 347 aa9.02□□□□□ -0.97
SOX6-209ENST00000527840 SKOR1P84550 965 aa9.02□□□□□ -0.97
SOX6-209ENST00000527840 MDM2Q00987 491 aaPredicted RBP9.02□□□□□ -0.97
SOX6-209ENST00000527840 CCDC24Q8N4L8 307 aa9.02□□□□□ -0.97
SOX6-209ENST00000527840 HPS1Q92902 700 aa9.02□□□□□ -0.97
SOX6-209ENST00000527840 SNRPBP14678 240 aaKnown RBP9.01□□□□□ -0.97
SOX6-209ENST00000527840 HLA-CQ95604 372 aa9.01□□□□□ -0.97
SOX6-209ENST00000527840 CLCN1P35523 988 aa8.99□□□□□ -0.97
SOX6-209ENST00000527840 RETREG3Q86VR2 466 aa8.99□□□□□ -0.97
SOX6-209ENST00000527840 GPCPD1Q9NPB8 672 aa8.99□□□□□ -0.97
SOX6-209ENST00000527840 CCDC102AQ96A19 550 aa8.98□□□□□ -0.97
SOX6-209ENST00000527840 NUDT12Q9BQG2 462 aa8.97□□□□□ -0.97
SOX6-209ENST00000527840 FAM217BQ9NTX9 383 aaPredicted RBP8.97□□□□□ -0.97
SOX6-209ENST00000527840 ALDH1A1P00352 501 aa8.96□□□□□ -0.98
SOX6-209ENST00000527840 GUCA2AQ02747 115 aa8.96□□□□□ -0.98
SOX6-209ENST00000527840 LCE2CQ5TA81 110 aa8.96□□□□□ -0.98
SOX6-209ENST00000527840 NUTM1Q86Y26 1132 aa8.95□□□□□ -0.98
SOX6-209ENST00000527840 SIAH2O43255 324 aa8.94□□□□□ -0.98
SOX6-209ENST00000527840 EHBP1Q8NDI1 1231 aa8.94□□□□□ -0.98
SOX6-209ENST00000527840 SLC16A10Q8TF71 515 aa8.94□□□□□ -0.98
SOX6-209ENST00000527840 HAP1P54257 671 aaPredicted RBP8.93□□□□□ -0.98
SOX6-209ENST00000527840 NPAS3Q8IXF0 933 aa8.93□□□□□ -0.98
SOX6-209ENST00000527840 CCNYL3P0C7X3 344 aa8.92□□□□□ -0.98
SOX6-209ENST00000527840 SYMPKQ92797 1274 aaKnown RBP8.92□□□□□ -0.98
SOX6-209ENST00000527840 WASF2Q9Y6W5 498 aa8.92□□□□□ -0.98
SOX6-209ENST00000527840 FDX1P10109 184 aa8.91□□□□□ -0.98
SOX6-209ENST00000527840 PTPRNQ16849 979 aa8.91□□□□□ -0.98
SOX6-209ENST00000527840 NXF1Q9UBU9 619 aaKnown RBP8.91□□□□□ -0.98
SOX6-209ENST00000527840 FAM181BA6NEQ2 426 aa8.9□□□□□ -0.98
SOX6-209ENST00000527840 CAPN5O15484 640 aaPredicted RBP8.9□□□□□ -0.98
SOX6-209ENST00000527840 MS4A1P11836 297 aa8.9□□□□□ -0.98
SOX6-209ENST00000527840 PTCRAQ6ISU1 281 aaPredicted RBP8.9□□□□□ -0.98
SOX6-209ENST00000527840 KDM2AQ9Y2K7 1162 aa8.9□□□□□ -0.98
SOX6-209ENST00000527840 SH3BP2P78314 561 aa8.89□□□□□ -0.99
SOX6-209ENST00000527840 TRIM46Q7Z4K8 759 aa8.89□□□□□ -0.99
SOX6-209ENST00000527840 KRI1Q8N9T8 703 aaKnown RBP8.89□□□□□ -0.99
SOX6-209ENST00000527840 C6orf229H3BNL8 230 aa8.88□□□□□ -0.99
SOX6-209ENST00000527840 BMP1P13497 986 aa8.88□□□□□ -0.99
SOX6-209ENST00000527840 IRF7Q92985 503 aa8.87□□□□□ -0.99
SOX6-209ENST00000527840 UNC93B1Q9H1C4 597 aa8.87□□□□□ -0.99
SOX6-209ENST00000527840 PCDHGC3Q9UN70 934 aa8.87□□□□□ -0.99
SOX6-209ENST00000527840 MPNDQ8N594 471 aa8.86□□□□□ -0.99
SOX6-209ENST00000527840 EVA1BQ9NVM1 165 aa8.86□□□□□ -0.99
SOX6-209ENST00000527840 PLEKHG3A1L390 1219 aa8.85□□□□□ -0.99
SOX6-209ENST00000527840 SPDYE5A6NIY4 337 aa8.85□□□□□ -0.99
SOX6-209ENST00000527840 DESI1Q6ICB0 168 aa8.85□□□□□ -0.99
SOX6-209ENST00000527840 VARSP26640 1264 aaKnown RBP8.84□□□□□ -0.99
SOX6-209ENST00000527840 KCNH2Q12809 1159 aa8.84□□□□□ -0.99
SOX6-209ENST00000527840 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
SOX6-209ENST00000527840 H3BM21 787 aa8.83□□□□□ -1
SOX6-209ENST00000527840 ZNF511Q8NB15 262 aa8.83□□□□□ -1
SOX6-209ENST00000527840 TLL2Q9Y6L7 1015 aa8.83□□□□□ -1
SOX6-209ENST00000527840 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
SOX6-209ENST00000527840 GMPRP36959 345 aa8.82□□□□□ -1
SOX6-209ENST00000527840 ZSCAN1Q8NBB4 408 aa8.82□□□□□ -1
SOX6-209ENST00000527840 MTMR2Q13614 643 aa8.81□□□□□ -1
SOX6-209ENST00000527840 LINC01559Q495D7 138 aa8.81□□□□□ -1
SOX6-209ENST00000527840 VSIG10Q8N0Z9 540 aa8.81□□□□□ -1
SOX6-209ENST00000527840 PRR7Q8TB68 274 aa8.81□□□□□ -1
SOX6-209ENST00000527840 MOXD2PA6NHM9 499 aa8.8□□□□□ -1
SOX6-209ENST00000527840 GJA5P36382 358 aa8.8□□□□□ -1
SOX6-209ENST00000527840 NNTQ13423 1086 aa8.8□□□□□ -1
SOX6-209ENST00000527840 BAP1Q92560 729 aa8.8□□□□□ -1
SOX6-209ENST00000527840 ZFP42Q96MM3 310 aa8.8□□□□□ -1
SOX6-209ENST00000527840 ADH1CP00326 375 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms