RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 C19orf44Q9H6X5 657 aa33.22■■■□□ 2.91
LRRK1-206ENST00000527698 C14orf37Q86TY3 774 aa33.21■■■□□ 2.91
LRRK1-206ENST00000527698 AHDC1Q5TGY3 1603 aaPredicted RBP33.2■■■□□ 2.91
LRRK1-206ENST00000527698 STK26Q9P289 416 aa33.2■■■□□ 2.91
LRRK1-206ENST00000527698 ROBO2Q9HCK4 1378 aa33.18■■■□□ 2.9
LRRK1-206ENST00000527698 DLC1Q96QB1 1528 aa33.18■■■□□ 2.9
LRRK1-206ENST00000527698 TRPM1Q7Z4N2 1603 aa33.17■■■□□ 2.9
LRRK1-206ENST00000527698 ATF3P18847 181 aa33.16■■■□□ 2.9
LRRK1-206ENST00000527698 SHPRHQ149N8 1683 aa33.14■■■□□ 2.9
LRRK1-206ENST00000527698 SPATA31A6Q5VVP1 1343 aa33.14■■■□□ 2.9
LRRK1-206ENST00000527698 DCCP43146 1447 aa33.13■■■□□ 2.89
LRRK1-206ENST00000527698 ADGRL3Q9HAR2 1447 aa33.11■■■□□ 2.89
LRRK1-206ENST00000527698 NBPF1Q3BBV0 1214 aa33.1■■■□□ 2.89
LRRK1-206ENST00000527698 TRAK1Q9UPV9 953 aa33.09■■■□□ 2.89
LRRK1-206ENST00000527698 ROCK2O75116 1388 aaKnown RBP33.09■■■□□ 2.89
LRRK1-206ENST00000527698 NBPF8Q3BBV2 869 aa33.08■■■□□ 2.89
LRRK1-206ENST00000527698 POGKQ9P215 609 aa33.08■■■□□ 2.89
LRRK1-206ENST00000527698 LRP6O75581 1613 aa33.08■■■□□ 2.89
LRRK1-206ENST00000527698 NALCNQ8IZF0 1738 aa33.05■■■□□ 2.88
LRRK1-206ENST00000527698 WAPLQ7Z5K2 1190 aa33.04■■■□□ 2.88
LRRK1-206ENST00000527698 PRAM1Q96QH2 718 aa33.04■■■□□ 2.88
LRRK1-206ENST00000527698 GPRASP1Q5JY77 1395 aa33.04■■■□□ 2.88
LRRK1-206ENST00000527698 RALGAPBQ86X10 1494 aa33.04■■■□□ 2.88
LRRK1-206ENST00000527698 BRINP3Q76B58 766 aa33.03■■■□□ 2.88
LRRK1-206ENST00000527698 ARHGEF28Q8N1W1 1705 aaKnown RBP33.02■■■□□ 2.88
LRRK1-206ENST00000527698 ZNF772Q68DY9 489 aaPredicted RBP32.99■■■□□ 2.87
LRRK1-206ENST00000527698 NHSL1Q5SYE7 1610 aa32.99■■■□□ 2.87
LRRK1-206ENST00000527698 EIF3AQ14152 1382 aaKnown RBP32.98■■■□□ 2.87
LRRK1-206ENST00000527698 MST1RQ04912 1400 aa32.98■■■□□ 2.87
LRRK1-206ENST00000527698 MEX3CQ5U5Q3 659 aaKnown RBP32.98■■■□□ 2.87
LRRK1-206ENST00000527698 CARD11Q9BXL7 1154 aa32.97■■■□□ 2.87
LRRK1-206ENST00000527698 PLEKHH1Q9ULM0 1364 aa32.96■■■□□ 2.87
LRRK1-206ENST00000527698 CDC42BPGQ6DT37 1551 aa32.96■■■□□ 2.87
LRRK1-206ENST00000527698 CENPJQ9HC77 1338 aaPredicted RBP32.91■■■□□ 2.86
LRRK1-206ENST00000527698 ADGRB2O60241 1585 aa32.91■■■□□ 2.86
LRRK1-206ENST00000527698 SAFB2Q14151 953 aaKnown RBP eCLIP32.9■■■□□ 2.86
LRRK1-206ENST00000527698 SLC24A1O60721 1099 aa32.86■■■□□ 2.85
LRRK1-206ENST00000527698 LRRC59Q96AG4 307 aaKnown RBP32.85■■■□□ 2.85
LRRK1-206ENST00000527698 FMN2Q9NZ56 1722 aa32.84■■■□□ 2.85
LRRK1-206ENST00000527698 MINK1Q8N4C8 1332 aaPredicted RBP32.83■■■□□ 2.85
LRRK1-206ENST00000527698 QRICH2Q9H0J4 1663 aa32.82■■■□□ 2.84
LRRK1-206ENST00000527698 C1orf167Q5SNV9 1468 aa32.81■■■□□ 2.84
LRRK1-206ENST00000527698 CDK12Q9NYV4 1490 aaPredicted RBP32.81■■■□□ 2.84
LRRK1-206ENST00000527698 WASLO00401 505 aaPredicted RBP32.81■■■□□ 2.84
LRRK1-206ENST00000527698 NUTM2BA6NNL0 878 aaPredicted RBP32.8■■■□□ 2.84
LRRK1-206ENST00000527698 NUTM2EB1AL46 878 aaPredicted RBP32.8■■■□□ 2.84
LRRK1-206ENST00000527698 NUTM2AQ8IVF1 878 aaPredicted RBP32.8■■■□□ 2.84
LRRK1-206ENST00000527698 RXRBP28702 533 aa32.79■■■□□ 2.84
LRRK1-206ENST00000527698 ANKARQ7Z5J8 1434 aa32.77■■■□□ 2.84
LRRK1-206ENST00000527698 HIRIP3Q9BW71 556 aaPredicted RBP32.77■■■□□ 2.84
LRRK1-206ENST00000527698 SBNO2Q9Y2G9 1366 aa32.77■■■□□ 2.84
LRRK1-206ENST00000527698 PNPLA6Q8IY17 1366 aa32.76■■■□□ 2.83
LRRK1-206ENST00000527698 AFF2P51816 1311 aa32.75■■■□□ 2.83
LRRK1-206ENST00000527698 UPF1Q92900 1129 aaKnown RBP eCLIP32.74■■■□□ 2.83
LRRK1-206ENST00000527698 EVC2Q86UK5 1308 aa32.73■■■□□ 2.83
LRRK1-206ENST00000527698 TULP4Q9NRJ4 1543 aa32.72■■■□□ 2.83
LRRK1-206ENST00000527698 ESCO1Q5FWF5 840 aa32.71■■■□□ 2.83
LRRK1-206ENST00000527698 CDK19Q9BWU1 502 aa32.71■■■□□ 2.83
LRRK1-206ENST00000527698 DDX17Q92841 729 aaKnown RBP32.7■■■□□ 2.83
LRRK1-206ENST00000527698 USP47Q96K76 1375 aa32.7■■■□□ 2.82
LRRK1-206ENST00000527698 KIF1AQ12756 1690 aa32.69■■■□□ 2.82
LRRK1-206ENST00000527698 ITSN1Q15811 1721 aa32.68■■■□□ 2.82
LRRK1-206ENST00000527698 RGPD8O14715 1765 aaPredicted RBP32.68■■■□□ 2.82
LRRK1-206ENST00000527698 NUTM2FA1L443 756 aa32.66■■■□□ 2.82
LRRK1-206ENST00000527698 ORAI2Q96SN7 254 aa32.66■■■□□ 2.82
LRRK1-206ENST00000527698 ST20-MTHFSA0A0A6YYL1 179 aa32.65■■■□□ 2.82
LRRK1-206ENST00000527698 SOS2Q07890 1332 aaPredicted RBP32.65■■■□□ 2.82
LRRK1-206ENST00000527698 SRPK2P78362 688 aaKnown RBP32.64■■■□□ 2.82
LRRK1-206ENST00000527698 C8orf37Q96NL8 207 aa32.64■■■□□ 2.82
LRRK1-206ENST00000527698 USP32Q8NFA0 1604 aa32.63■■■□□ 2.81
LRRK1-206ENST00000527698 NPHP3Q7Z494 1330 aa32.63■■■□□ 2.81
LRRK1-206ENST00000527698 NUDT16Q96DE0 195 aaKnown RBP32.63■■■□□ 2.81
LRRK1-206ENST00000527698 PUS7Q96PZ0 661 aaKnown RBP32.62■■■□□ 2.81
LRRK1-206ENST00000527698 PHF8Q9UPP1 1060 aa32.62■■■□□ 2.81
LRRK1-206ENST00000527698 CCDC61Q9Y6R9 512 aa32.62■■■□□ 2.81
LRRK1-206ENST00000527698 EIF4G2P78344 907 aaKnown RBP eCLIP32.61■■■□□ 2.81
LRRK1-206ENST00000527698 RBM6P78332 1123 aaKnown RBP32.6■■■□□ 2.81
LRRK1-206ENST00000527698 QTRT2Q9H974 415 aaKnown RBP32.59■■■□□ 2.81
LRRK1-206ENST00000527698 ATP7BP35670 1465 aa32.59■■■□□ 2.81
LRRK1-206ENST00000527698 COL22A1Q8NFW1 1626 aaPredicted RBP32.59■■■□□ 2.81
LRRK1-206ENST00000527698 RGS12O14924 1447 aa32.58■■■□□ 2.81
LRRK1-206ENST00000527698 TESK2Q96S53 571 aa32.57■■■□□ 2.8
LRRK1-206ENST00000527698 PRR36Q9H6K5 1346 aa32.56■■■□□ 2.8
LRRK1-206ENST00000527698 ATAD2Q6PL18 1390 aa32.56■■■□□ 2.8
LRRK1-206ENST00000527698 TMF1P82094 1093 aa32.55■■■□□ 2.8
LRRK1-206ENST00000527698 CDCA8Q53HL2 280 aa32.55■■■□□ 2.8
LRRK1-206ENST00000527698 CABP2Q9NPB3 220 aa32.55■■■□□ 2.8
LRRK1-206ENST00000527698 FOXO3O43524 673 aa32.54■■■□□ 2.8
LRRK1-206ENST00000527698 NGLY1Q96IV0 654 aa32.54■■■□□ 2.8
LRRK1-206ENST00000527698 TOPAZ1Q8N9V7 1692 aa32.53■■■□□ 2.8
LRRK1-206ENST00000527698 ZEB1P37275 1124 aaPredicted RBP32.53■■■□□ 2.8
LRRK1-206ENST00000527698 PSME1Q06323 249 aa32.53■■■□□ 2.8
LRRK1-206ENST00000527698 PLEKHG3A1L390 1219 aa32.52■■■□□ 2.8
LRRK1-206ENST00000527698 ADAMTS2O95450 1211 aa32.52■■■□□ 2.8
LRRK1-206ENST00000527698 NGDNQ8NEJ9 315 aaKnown RBP32.5■■■□□ 2.79
LRRK1-206ENST00000527698 PMFBP1Q8TBY8 1022 aa32.48■■■□□ 2.79
LRRK1-206ENST00000527698 PPIP5K1Q6PFW1 1433 aa32.48■■■□□ 2.79
LRRK1-206ENST00000527698 POLR3AO14802 1390 aaPredicted RBP32.46■■■□□ 2.79
LRRK1-206ENST00000527698 KRT28Q7Z3Y7 464 aa32.46■■■□□ 2.79
LRRK1-206ENST00000527698 FNBP4Q8N3X1 1017 aaPredicted RBP32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms