RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 PLA2G2CQ5R387 149 aa17.74■□□□□ 0.43
CTNND1-217ENST00000527599 USB1Q9BQ65 265 aaKnown RBP17.73■□□□□ 0.43
CTNND1-217ENST00000527599 TPRNQ4KMQ1 711 aa17.72■□□□□ 0.43
CTNND1-217ENST00000527599 V9GY48 417 aaPredicted RBP17.7■□□□□ 0.42
CTNND1-217ENST00000527599 LIAT1Q6ZQX7 453 aa17.69■□□□□ 0.42
CTNND1-217ENST00000527599 KDM4CQ9H3R0 1056 aa17.68■□□□□ 0.42
CTNND1-217ENST00000527599 RSBN1LQ6PCB5 846 aaPredicted RBP17.67■□□□□ 0.42
CTNND1-217ENST00000527599 MMP16P51512 607 aa17.66■□□□□ 0.42
CTNND1-217ENST00000527599 SLC19A1P41440 591 aa17.65■□□□□ 0.42
CTNND1-217ENST00000527599 FCF1Q9Y324 198 aaKnown RBP17.65■□□□□ 0.42
CTNND1-217ENST00000527599 PCDHB15Q9Y5E8 787 aa17.65■□□□□ 0.42
CTNND1-217ENST00000527599 SPTLC1O15269 473 aa17.64■□□□□ 0.41
CTNND1-217ENST00000527599 MYSM1Q5VVJ2 828 aa17.64■□□□□ 0.41
CTNND1-217ENST00000527599 DXOO77932 396 aaKnown RBP17.63■□□□□ 0.41
CTNND1-217ENST00000527599 DIXDC1Q155Q3 683 aa17.63■□□□□ 0.41
CTNND1-217ENST00000527599 C6orf229H3BNL8 230 aa17.62■□□□□ 0.41
CTNND1-217ENST00000527599 GJA5P36382 358 aa17.62■□□□□ 0.41
CTNND1-217ENST00000527599 RETREG3Q86VR2 466 aa17.62■□□□□ 0.41
CTNND1-217ENST00000527599 FAM117AQ9C073 453 aa17.62■□□□□ 0.41
CTNND1-217ENST00000527599 RIC3Q7Z5B4 369 aa17.61■□□□□ 0.41
CTNND1-217ENST00000527599 LIMD1Q9UGP4 676 aa17.6■□□□□ 0.41
CTNND1-217ENST00000527599 SPRYD7Q5W111 196 aa17.58■□□□□ 0.4
CTNND1-217ENST00000527599 IRX2Q9BZI1 471 aaPredicted RBP17.58■□□□□ 0.4
CTNND1-217ENST00000527599 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
CTNND1-217ENST00000527599 JUNDP17535 347 aa17.55■□□□□ 0.4
CTNND1-217ENST00000527599 MTMR2Q13614 643 aa17.55■□□□□ 0.4
CTNND1-217ENST00000527599 CABLES1Q8TDN4 633 aa17.53■□□□□ 0.4
CTNND1-217ENST00000527599 HRCP23327 699 aa17.52■□□□□ 0.4
CTNND1-217ENST00000527599 CSPP1Q1MSJ5 1256 aa17.52■□□□□ 0.4
CTNND1-217ENST00000527599 PRR7Q8TB68 274 aa17.52■□□□□ 0.4
CTNND1-217ENST00000527599 PRKCSHP14314 528 aaPredicted RBP17.51■□□□□ 0.39
CTNND1-217ENST00000527599 TRIM67Q6ZTA4 783 aa17.51■□□□□ 0.39
CTNND1-217ENST00000527599 ZNF598Q86UK7 904 aaKnown RBP17.51■□□□□ 0.39
CTNND1-217ENST00000527599 QPCTQ16769 361 aa17.5■□□□□ 0.39
CTNND1-217ENST00000527599 POLR3EQ9NVU0 708 aa17.5■□□□□ 0.39
CTNND1-217ENST00000527599 RPIAP49247 311 aa17.49■□□□□ 0.39
CTNND1-217ENST00000527599 BRPF1P55201 1214 aaPredicted RBP17.49■□□□□ 0.39
CTNND1-217ENST00000527599 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
CTNND1-217ENST00000527599 CFAP99D6REC4 459 aa17.48■□□□□ 0.39
CTNND1-217ENST00000527599 DDRGK1Q96HY6 314 aa17.48■□□□□ 0.39
CTNND1-217ENST00000527599 SPDYE5A6NIY4 337 aa17.47■□□□□ 0.39
CTNND1-217ENST00000527599 TUSC1Q2TAM9 212 aa17.47■□□□□ 0.39
CTNND1-217ENST00000527599 ZNF697Q5TEC3 545 aa17.47■□□□□ 0.39
CTNND1-217ENST00000527599 PRPF38BQ5VTL8 546 aaKnown RBP17.47■□□□□ 0.39
CTNND1-217ENST00000527599 RSPH6AQ9H0K4 717 aa17.47■□□□□ 0.39
CTNND1-217ENST00000527599 ZBTB3Q9H5J0 574 aa17.47■□□□□ 0.39
CTNND1-217ENST00000527599 CLK2P49760 499 aaKnown RBP17.46■□□□□ 0.39
CTNND1-217ENST00000527599 GFRA3O60609 400 aa17.45■□□□□ 0.38
CTNND1-217ENST00000527599 LILRB3O75022 631 aa17.45■□□□□ 0.38
CTNND1-217ENST00000527599 CCDC24Q8N4L8 307 aa17.45■□□□□ 0.38
CTNND1-217ENST00000527599 PDZRN3Q9UPQ7 1066 aa17.43■□□□□ 0.38
CTNND1-217ENST00000527599 RTL5Q5HYW3 569 aaPredicted RBP17.42■□□□□ 0.38
CTNND1-217ENST00000527599 FBXO31Q5XUX0 539 aaPredicted RBP17.42■□□□□ 0.38
CTNND1-217ENST00000527599 DESI1Q6ICB0 168 aa17.42■□□□□ 0.38
CTNND1-217ENST00000527599 PTCRAQ6ISU1 281 aaPredicted RBP17.42■□□□□ 0.38
CTNND1-217ENST00000527599 NUDT12Q9BQG2 462 aa17.42■□□□□ 0.38
CTNND1-217ENST00000527599 SKIV2LQ15477 1246 aaKnown RBP17.41■□□□□ 0.38
CTNND1-217ENST00000527599 SH3D19Q5HYK7 790 aa17.41■□□□□ 0.38
CTNND1-217ENST00000527599 PROCA1Q8NCQ7 364 aaPredicted RBP17.41■□□□□ 0.38
CTNND1-217ENST00000527599 GDF9O60383 454 aa17.4■□□□□ 0.38
CTNND1-217ENST00000527599 PKD2L1Q9P0L9 805 aa17.4■□□□□ 0.38
CTNND1-217ENST00000527599 CD2BP2O95400 341 aaKnown RBP17.39■□□□□ 0.37
CTNND1-217ENST00000527599 ZBTB24O43167 697 aaPredicted RBP17.38■□□□□ 0.37
CTNND1-217ENST00000527599 PTPRNQ16849 979 aa17.38■□□□□ 0.37
CTNND1-217ENST00000527599 TRIM32Q13049 653 aa17.37■□□□□ 0.37
CTNND1-217ENST00000527599 NUTM2BA6NNL0 878 aaPredicted RBP17.36■□□□□ 0.37
CTNND1-217ENST00000527599 NUTM2EB1AL46 878 aaPredicted RBP17.36■□□□□ 0.37
CTNND1-217ENST00000527599 NRG2O14511 850 aaPredicted RBP17.36■□□□□ 0.37
CTNND1-217ENST00000527599 CCNYL3P0C7X3 344 aa17.36■□□□□ 0.37
CTNND1-217ENST00000527599 NUTM2DQ5VT03 806 aaPredicted RBP17.36■□□□□ 0.37
CTNND1-217ENST00000527599 NUTM2AQ8IVF1 878 aaPredicted RBP17.36■□□□□ 0.37
CTNND1-217ENST00000527599 TNFRSF10AO00220 468 aa17.35■□□□□ 0.37
CTNND1-217ENST00000527599 LYPD8Q6UX82 237 aa17.35■□□□□ 0.37
CTNND1-217ENST00000527599 IL27Q8NEV9 243 aa17.35■□□□□ 0.37
CTNND1-217ENST00000527599 PRR20EP86478 221 aa17.34■□□□□ 0.37
CTNND1-217ENST00000527599 PRR20CP86479 221 aa17.34■□□□□ 0.37
CTNND1-217ENST00000527599 PRR20DP86480 221 aa17.34■□□□□ 0.37
CTNND1-217ENST00000527599 PRR20BP86481 221 aa17.34■□□□□ 0.37
CTNND1-217ENST00000527599 PRR20AP86496 221 aa17.34■□□□□ 0.37
CTNND1-217ENST00000527599 LAPTM4AQ15012 233 aa17.34■□□□□ 0.37
CTNND1-217ENST00000527599 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.34■□□□□ 0.37
CTNND1-217ENST00000527599 EVA1BQ9NVM1 165 aa17.34■□□□□ 0.37
CTNND1-217ENST00000527599 PER1O15534 1290 aaPredicted RBP17.33■□□□□ 0.36
CTNND1-217ENST00000527599 FOXC1Q12948 553 aa17.33■□□□□ 0.36
CTNND1-217ENST00000527599 LCE2BO14633 110 aa17.3■□□□□ 0.36
CTNND1-217ENST00000527599 SKOR1P84550 965 aa17.3■□□□□ 0.36
CTNND1-217ENST00000527599 KCNH2Q12809 1159 aa17.29■□□□□ 0.36
CTNND1-217ENST00000527599 Q6ZNB5 142 aa17.28■□□□□ 0.36
CTNND1-217ENST00000527599 TSC1Q92574 1164 aa17.28■□□□□ 0.36
CTNND1-217ENST00000527599 UNC93B1Q9H1C4 597 aa17.26■□□□□ 0.35
CTNND1-217ENST00000527599 F12P00748 615 aaPredicted RBP17.25■□□□□ 0.35
CTNND1-217ENST00000527599 MAP10Q9P2G4 905 aa17.25■□□□□ 0.35
CTNND1-217ENST00000527599 WNT7AO00755 349 aa17.23■□□□□ 0.35
CTNND1-217ENST00000527599 PPP2R2DQ66LE6 453 aa17.23■□□□□ 0.35
CTNND1-217ENST00000527599 GOPCQ9HD26 462 aa17.22■□□□□ 0.35
CTNND1-217ENST00000527599 TOR4AQ9NXH8 423 aa17.22■□□□□ 0.35
CTNND1-217ENST00000527599 CTDSPL2Q05D32 466 aa17.21■□□□□ 0.35
CTNND1-217ENST00000527599 CTHP32929 405 aa17.2■□□□□ 0.34
CTNND1-217ENST00000527599 WNT7BP56706 349 aa17.2■□□□□ 0.34
CTNND1-217ENST00000527599 BAP1Q92560 729 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms