RNA–Protein interactions for RNA: ENST00000527374.1

AP003080.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003080.1, Length 2,371 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003080.1-201ENST00000527374 FKBP8Q14318 412 aa13.72□□□□□ -0.21
AP003080.1-201ENST00000527374 TECPR2O15040 1411 aa13.72□□□□□ -0.21
AP003080.1-201ENST00000527374 SAFB2Q14151 953 aaKnown RBP eCLIP13.72□□□□□ -0.21
AP003080.1-201ENST00000527374 PTCH1Q13635 1447 aa13.71□□□□□ -0.21
AP003080.1-201ENST00000527374 C14orf37Q86TY3 774 aa13.71□□□□□ -0.21
AP003080.1-201ENST00000527374 PRAM1Q96QH2 718 aa13.71□□□□□ -0.21
AP003080.1-201ENST00000527374 RALGAPBQ86X10 1494 aa13.7□□□□□ -0.22
AP003080.1-201ENST00000527374 ARHGEF28Q8N1W1 1705 aaKnown RBP13.7□□□□□ -0.22
AP003080.1-201ENST00000527374 CARD11Q9BXL7 1154 aa13.69□□□□□ -0.22
AP003080.1-201ENST00000527374 NALCNQ8IZF0 1738 aa13.69□□□□□ -0.22
AP003080.1-201ENST00000527374 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.69□□□□□ -0.22
AP003080.1-201ENST00000527374 POGKQ9P215 609 aa13.68□□□□□ -0.22
AP003080.1-201ENST00000527374 GPRASP1Q5JY77 1395 aa13.68□□□□□ -0.22
AP003080.1-201ENST00000527374 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
AP003080.1-201ENST00000527374 SIRT1Q96EB6 747 aa13.67□□□□□ -0.22
AP003080.1-201ENST00000527374 DLC1Q96QB1 1528 aa13.67□□□□□ -0.22
AP003080.1-201ENST00000527374 C19orf44Q9H6X5 657 aa13.67□□□□□ -0.22
AP003080.1-201ENST00000527374 MSH6P52701 1360 aa13.66□□□□□ -0.22
AP003080.1-201ENST00000527374 HIRIP3Q9BW71 556 aaPredicted RBP13.66□□□□□ -0.22
AP003080.1-201ENST00000527374 NCOA3Q9Y6Q9 1424 aa13.66□□□□□ -0.22
AP003080.1-201ENST00000527374 IQSEC2Q5JU85 1478 aa13.65□□□□□ -0.22
AP003080.1-201ENST00000527374 ADGRL3Q9HAR2 1447 aa13.65□□□□□ -0.22
AP003080.1-201ENST00000527374 MINK1Q8N4C8 1332 aaPredicted RBP13.65□□□□□ -0.22
AP003080.1-201ENST00000527374 UBAP1LF5GYI3 381 aa13.65□□□□□ -0.22
AP003080.1-201ENST00000527374 NUTM2FA1L443 756 aa13.63□□□□□ -0.23
AP003080.1-201ENST00000527374 ATF3P18847 181 aa13.63□□□□□ -0.23
AP003080.1-201ENST00000527374 CENPJQ9HC77 1338 aaPredicted RBP13.62□□□□□ -0.23
AP003080.1-201ENST00000527374 QRICH2Q9H0J4 1663 aa13.62□□□□□ -0.23
AP003080.1-201ENST00000527374 TOM1O60784 492 aa13.61□□□□□ -0.23
AP003080.1-201ENST00000527374 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
AP003080.1-201ENST00000527374 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
AP003080.1-201ENST00000527374 SLAIN2Q9P270 581 aa13.6□□□□□ -0.23
AP003080.1-201ENST00000527374 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
AP003080.1-201ENST00000527374 ST20-MTHFSA0A0A6YYL1 179 aa13.6□□□□□ -0.23
AP003080.1-201ENST00000527374 USP47Q96K76 1375 aa13.59□□□□□ -0.23
AP003080.1-201ENST00000527374 EIF3AQ14152 1382 aaKnown RBP13.59□□□□□ -0.23
AP003080.1-201ENST00000527374 RGPD8O14715 1765 aaPredicted RBP13.59□□□□□ -0.23
AP003080.1-201ENST00000527374 DCCP43146 1447 aa13.59□□□□□ -0.23
AP003080.1-201ENST00000527374 CDC42BPGQ6DT37 1551 aa13.59□□□□□ -0.23
AP003080.1-201ENST00000527374 MST1RQ04912 1400 aa13.58□□□□□ -0.24
AP003080.1-201ENST00000527374 FMN2Q9NZ56 1722 aa13.57□□□□□ -0.24
AP003080.1-201ENST00000527374 ADGRB2O60241 1585 aa13.57□□□□□ -0.24
AP003080.1-201ENST00000527374 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
AP003080.1-201ENST00000527374 CDK19Q9BWU1 502 aa13.57□□□□□ -0.24
AP003080.1-201ENST00000527374 FBXO41Q8TF61 875 aa13.56□□□□□ -0.24
AP003080.1-201ENST00000527374 ORAI2Q96SN7 254 aa13.56□□□□□ -0.24
AP003080.1-201ENST00000527374 TESK2Q96S53 571 aa13.56□□□□□ -0.24
AP003080.1-201ENST00000527374 ROBO1Q9Y6N7 1651 aa13.55□□□□□ -0.24
AP003080.1-201ENST00000527374 C1orf167Q5SNV9 1468 aa13.55□□□□□ -0.24
AP003080.1-201ENST00000527374 USP32Q8NFA0 1604 aa13.55□□□□□ -0.24
AP003080.1-201ENST00000527374 TULP4Q9NRJ4 1543 aa13.55□□□□□ -0.24
AP003080.1-201ENST00000527374 PRR36Q9H6K5 1346 aa13.54□□□□□ -0.24
AP003080.1-201ENST00000527374 HSPA5P11021 654 aaKnown RBP13.54□□□□□ -0.24
AP003080.1-201ENST00000527374 CABP2Q9NPB3 220 aa13.54□□□□□ -0.24
AP003080.1-201ENST00000527374 EIF4G2P78344 907 aaKnown RBP eCLIP13.54□□□□□ -0.24
AP003080.1-201ENST00000527374 ESCO1Q5FWF5 840 aa13.54□□□□□ -0.24
AP003080.1-201ENST00000527374 BRINP3Q76B58 766 aa13.54□□□□□ -0.24
AP003080.1-201ENST00000527374 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
AP003080.1-201ENST00000527374 DDX17Q92841 729 aaKnown RBP13.53□□□□□ -0.24
AP003080.1-201ENST00000527374 SBNO2Q9Y2G9 1366 aa13.52□□□□□ -0.25
AP003080.1-201ENST00000527374 EVC2Q86UK5 1308 aa13.52□□□□□ -0.25
AP003080.1-201ENST00000527374 NUDT16Q96DE0 195 aaKnown RBP13.52□□□□□ -0.25
AP003080.1-201ENST00000527374 PMFBP1Q8TBY8 1022 aa13.51□□□□□ -0.25
AP003080.1-201ENST00000527374 ATP7BP35670 1465 aa13.5□□□□□ -0.25
AP003080.1-201ENST00000527374 ZEB1P37275 1124 aaPredicted RBP13.5□□□□□ -0.25
AP003080.1-201ENST00000527374 ILDR1Q86SU0 546 aaPredicted RBP13.5□□□□□ -0.25
AP003080.1-201ENST00000527374 DISP3Q9P2K9 1392 aa13.5□□□□□ -0.25
AP003080.1-201ENST00000527374 FOXO3O43524 673 aa13.49□□□□□ -0.25
AP003080.1-201ENST00000527374 ANKARQ7Z5J8 1434 aa13.49□□□□□ -0.25
AP003080.1-201ENST00000527374 HSPA1LP34931 641 aa13.49□□□□□ -0.25
AP003080.1-201ENST00000527374 PHF8Q9UPP1 1060 aa13.48□□□□□ -0.25
AP003080.1-201ENST00000527374 XPCQ01831 940 aaPredicted RBP13.47□□□□□ -0.25
AP003080.1-201ENST00000527374 HOMEZQ8IX15 550 aa13.47□□□□□ -0.25
AP003080.1-201ENST00000527374 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
AP003080.1-201ENST00000527374 TMF1P82094 1093 aa13.47□□□□□ -0.25
AP003080.1-201ENST00000527374 TOPAZ1Q8N9V7 1692 aa13.46□□□□□ -0.25
AP003080.1-201ENST00000527374 C11orf95C9JLR9 678 aaPredicted RBP13.46□□□□□ -0.25
AP003080.1-201ENST00000527374 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
AP003080.1-201ENST00000527374 ITSN1Q15811 1721 aa13.46□□□□□ -0.25
AP003080.1-201ENST00000527374 PHLPP1O60346 1717 aa13.46□□□□□ -0.26
AP003080.1-201ENST00000527374 PPIP5K1Q6PFW1 1433 aa13.45□□□□□ -0.26
AP003080.1-201ENST00000527374 NHSL1Q5SYE7 1610 aa13.45□□□□□ -0.26
AP003080.1-201ENST00000527374 KIF1AQ12756 1690 aa13.44□□□□□ -0.26
AP003080.1-201ENST00000527374 TULP1O00294 542 aaPredicted RBP13.44□□□□□ -0.26
AP003080.1-201ENST00000527374 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
AP003080.1-201ENST00000527374 TMC1Q8TDI8 760 aa13.44□□□□□ -0.26
AP003080.1-201ENST00000527374 POLR3GLQ9BT43 218 aa13.44□□□□□ -0.26
AP003080.1-201ENST00000527374 SLC12A5Q9H2X9 1139 aa13.44□□□□□ -0.26
AP003080.1-201ENST00000527374 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
AP003080.1-201ENST00000527374 ACEP12821 1306 aa13.44□□□□□ -0.26
AP003080.1-201ENST00000527374 AHDC1Q5TGY3 1603 aaPredicted RBP13.43□□□□□ -0.26
AP003080.1-201ENST00000527374 PLEKHG3A1L390 1219 aa13.43□□□□□ -0.26
AP003080.1-201ENST00000527374 ATAD2Q6PL18 1390 aa13.43□□□□□ -0.26
AP003080.1-201ENST00000527374 COL16A1Q07092 1604 aaPredicted RBP13.42□□□□□ -0.26
AP003080.1-201ENST00000527374 PSME1Q06323 249 aa13.42□□□□□ -0.26
AP003080.1-201ENST00000527374 KRT28Q7Z3Y7 464 aa13.42□□□□□ -0.26
AP003080.1-201ENST00000527374 NPHP3Q7Z494 1330 aa13.42□□□□□ -0.26
AP003080.1-201ENST00000527374 SOS2Q07890 1332 aaPredicted RBP13.42□□□□□ -0.26
AP003080.1-201ENST00000527374 PXDNQ92626 1479 aa13.41□□□□□ -0.26
AP003080.1-201ENST00000527374 POLR3AO14802 1390 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms