RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 PNPLA6Q8IY17 1366 aa25.2■■□□□ 1.63
LTBP3-208ENST00000527339 DCAF11Q8TEB1 546 aa25.19■■□□□ 1.62
LTBP3-208ENST00000527339 LRRC59Q96AG4 307 aaKnown RBP25.19■■□□□ 1.62
LTBP3-208ENST00000527339 PCGF6Q9BYE7 350 aa25.19■■□□□ 1.62
LTBP3-208ENST00000527339 CDK12Q9NYV4 1490 aaPredicted RBP25.17■■□□□ 1.62
LTBP3-208ENST00000527339 C8orf37Q96NL8 207 aa25.17■■□□□ 1.62
LTBP3-208ENST00000527339 PRAG1Q86YV5 1406 aa25.17■■□□□ 1.62
LTBP3-208ENST00000527339 C1orf167Q5SNV9 1468 aa25.16■■□□□ 1.62
LTBP3-208ENST00000527339 PTCH1Q13635 1447 aa25.15■■□□□ 1.62
LTBP3-208ENST00000527339 ROBO2Q9HCK4 1378 aa25.15■■□□□ 1.62
LTBP3-208ENST00000527339 RGS12O14924 1447 aa25.14■■□□□ 1.62
LTBP3-208ENST00000527339 C14orf93Q9H972 538 aaKnown RBP25.14■■□□□ 1.62
LTBP3-208ENST00000527339 KDM2AQ9Y2K7 1162 aa25.14■■□□□ 1.62
LTBP3-208ENST00000527339 KNDC1Q76NI1 1749 aa25.14■■□□□ 1.61
LTBP3-208ENST00000527339 ORAI2Q96SN7 254 aa25.13■■□□□ 1.61
LTBP3-208ENST00000527339 QTRT2Q9H974 415 aaKnown RBP25.13■■□□□ 1.61
LTBP3-208ENST00000527339 SIN3AQ96ST3 1273 aa25.12■■□□□ 1.61
LTBP3-208ENST00000527339 ADAMTS2O95450 1211 aa25.1■■□□□ 1.61
LTBP3-208ENST00000527339 CFAP70Q5T0N1 1121 aa25.1■■□□□ 1.61
LTBP3-208ENST00000527339 LRPPRCP42704 1394 aaKnown RBP25.09■■□□□ 1.61
LTBP3-208ENST00000527339 TECPR2O15040 1411 aa25.09■■□□□ 1.61
LTBP3-208ENST00000527339 SOS2Q07890 1332 aaPredicted RBP25.08■■□□□ 1.6
LTBP3-208ENST00000527339 YTHDC2Q9H6S0 1430 aaKnown RBP25.07■■□□□ 1.6
LTBP3-208ENST00000527339 RBM6P78332 1123 aaKnown RBP25.07■■□□□ 1.6
LTBP3-208ENST00000527339 NEUROD1Q13562 356 aa25.07■■□□□ 1.6
LTBP3-208ENST00000527339 TMEM132EQ6IEE7 984 aa25.07■■□□□ 1.6
LTBP3-208ENST00000527339 ABCC11Q96J66 1382 aa25.06■■□□□ 1.6
LTBP3-208ENST00000527339 KIAA1210Q9ULL0 1709 aa25.06■■□□□ 1.6
LTBP3-208ENST00000527339 ADGRB1O14514 1584 aa25.05■■□□□ 1.6
LTBP3-208ENST00000527339 NGLY1Q96IV0 654 aa25.04■■□□□ 1.6
LTBP3-208ENST00000527339 EP400Q96L91 3159 aa25.04■■□□□ 1.6
LTBP3-208ENST00000527339 L3MBTL2Q969R5 705 aa25.03■■□□□ 1.6
LTBP3-208ENST00000527339 STK26Q9P289 416 aa25.03■■□□□ 1.6
LTBP3-208ENST00000527339 DLC1Q96QB1 1528 aa24.99■■□□□ 1.59
LTBP3-208ENST00000527339 SIRT1Q96EB6 747 aa24.98■■□□□ 1.59
LTBP3-208ENST00000527339 FNBP4Q8N3X1 1017 aaPredicted RBP24.97■■□□□ 1.59
LTBP3-208ENST00000527339 USP21Q9UK80 565 aa24.97■■□□□ 1.59
LTBP3-208ENST00000527339 COL22A1Q8NFW1 1626 aaPredicted RBP24.95■■□□□ 1.58
LTBP3-208ENST00000527339 TONSLQ96HA7 1378 aa24.94■■□□□ 1.58
LTBP3-208ENST00000527339 WAPLQ7Z5K2 1190 aa24.94■■□□□ 1.58
LTBP3-208ENST00000527339 CDC42BPGQ6DT37 1551 aa24.93■■□□□ 1.58
LTBP3-208ENST00000527339 CLSPNQ9HAW4 1339 aa24.93■■□□□ 1.58
LTBP3-208ENST00000527339 XPCQ01831 940 aaPredicted RBP24.93■■□□□ 1.58
LTBP3-208ENST00000527339 PXDNQ92626 1479 aa24.93■■□□□ 1.58
LTBP3-208ENST00000527339 ATRNO75882 1429 aa24.93■■□□□ 1.58
LTBP3-208ENST00000527339 TRPM1Q7Z4N2 1603 aa24.93■■□□□ 1.58
LTBP3-208ENST00000527339 PLEKHH1Q9ULM0 1364 aa24.93■■□□□ 1.58
LTBP3-208ENST00000527339 ARHGEF28Q8N1W1 1705 aaKnown RBP24.92■■□□□ 1.58
LTBP3-208ENST00000527339 ESCO1Q5FWF5 840 aa24.91■■□□□ 1.58
LTBP3-208ENST00000527339 TRPC5Q9UL62 973 aaPredicted RBP24.91■■□□□ 1.58
LTBP3-208ENST00000527339 FOXO3O43524 673 aa24.9■■□□□ 1.58
LTBP3-208ENST00000527339 TRAK1Q9UPV9 953 aa24.9■■□□□ 1.58
LTBP3-208ENST00000527339 BCL9LQ86UU0 1499 aa24.89■■□□□ 1.58
LTBP3-208ENST00000527339 NUTM2FA1L443 756 aa24.89■■□□□ 1.58
LTBP3-208ENST00000527339 PRAM1Q96QH2 718 aa24.88■■□□□ 1.57
LTBP3-208ENST00000527339 ATAD2Q6PL18 1390 aa24.87■■□□□ 1.57
LTBP3-208ENST00000527339 NPHP3Q7Z494 1330 aa24.86■■□□□ 1.57
LTBP3-208ENST00000527339 NBPF1Q3BBV0 1214 aa24.86■■□□□ 1.57
LTBP3-208ENST00000527339 POGKQ9P215 609 aa24.86■■□□□ 1.57
LTBP3-208ENST00000527339 FMN2Q9NZ56 1722 aa24.85■■□□□ 1.57
LTBP3-208ENST00000527339 ADGRB2O60241 1585 aa24.84■■□□□ 1.57
LTBP3-208ENST00000527339 MARF1Q9Y4F3 1742 aaKnown RBP24.83■■□□□ 1.57
LTBP3-208ENST00000527339 SAFB2Q14151 953 aaKnown RBP eCLIP24.82■■□□□ 1.56
LTBP3-208ENST00000527339 NBPF8Q3BBV2 869 aa24.8■■□□□ 1.56
LTBP3-208ENST00000527339 CCER1Q8TC90 406 aaPredicted RBP24.8■■□□□ 1.56
LTBP3-208ENST00000527339 ROCK2O75116 1388 aaKnown RBP24.8■■□□□ 1.56
LTBP3-208ENST00000527339 GJD4Q96KN9 370 aaPredicted RBP24.78■■□□□ 1.56
LTBP3-208ENST00000527339 RALGAPBQ86X10 1494 aa24.77■■□□□ 1.56
LTBP3-208ENST00000527339 TIMELESSQ9UNS1 1208 aa24.76■■□□□ 1.55
LTBP3-208ENST00000527339 SPATA31A3Q5VYP0 1347 aa24.76■■□□□ 1.55
LTBP3-208ENST00000527339 GPRASP1Q5JY77 1395 aa24.76■■□□□ 1.55
LTBP3-208ENST00000527339 RGPD8O14715 1765 aaPredicted RBP24.75■■□□□ 1.55
LTBP3-208ENST00000527339 GLI3P10071 1580 aa24.75■■□□□ 1.55
LTBP3-208ENST00000527339 MINK1Q8N4C8 1332 aaPredicted RBP24.74■■□□□ 1.55
LTBP3-208ENST00000527339 SLIT2O94813 1529 aa24.74■■□□□ 1.55
LTBP3-208ENST00000527339 QRICH2Q9H0J4 1663 aa24.73■■□□□ 1.55
LTBP3-208ENST00000527339 HIRIP3Q9BW71 556 aaPredicted RBP24.72■■□□□ 1.55
LTBP3-208ENST00000527339 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.72■■□□□ 1.55
LTBP3-208ENST00000527339 KIF1AQ12756 1690 aa24.72■■□□□ 1.55
LTBP3-208ENST00000527339 UNC5CLQ8IV45 518 aa24.71■■□□□ 1.55
LTBP3-208ENST00000527339 ANKARQ7Z5J8 1434 aa24.7■■□□□ 1.55
LTBP3-208ENST00000527339 EIF3AQ14152 1382 aaKnown RBP24.7■■□□□ 1.55
LTBP3-208ENST00000527339 CENPJQ9HC77 1338 aaPredicted RBP24.7■■□□□ 1.54
LTBP3-208ENST00000527339 KRT28Q7Z3Y7 464 aa24.7■■□□□ 1.54
LTBP3-208ENST00000527339 USP32Q8NFA0 1604 aa24.7■■□□□ 1.54
LTBP3-208ENST00000527339 CABLES1Q8TDN4 633 aa24.69■■□□□ 1.54
LTBP3-208ENST00000527339 TULP4Q9NRJ4 1543 aa24.69■■□□□ 1.54
LTBP3-208ENST00000527339 WASLO00401 505 aaPredicted RBP24.68■■□□□ 1.54
LTBP3-208ENST00000527339 ZRANB1Q9UGI0 708 aa24.67■■□□□ 1.54
LTBP3-208ENST00000527339 BRWD3Q6RI45 1802 aa24.67■■□□□ 1.54
LTBP3-208ENST00000527339 CARD11Q9BXL7 1154 aa24.66■■□□□ 1.54
LTBP3-208ENST00000527339 ITSN1Q15811 1721 aa24.66■■□□□ 1.54
LTBP3-208ENST00000527339 PLEKHG5O94827 1062 aa24.65■■□□□ 1.54
LTBP3-208ENST00000527339 CCDC125Q86Z20 511 aa24.65■■□□□ 1.54
LTBP3-208ENST00000527339 PHF8Q9UPP1 1060 aa24.64■■□□□ 1.54
LTBP3-208ENST00000527339 TNS3Q68CZ2 1445 aa24.63■■□□□ 1.53
LTBP3-208ENST00000527339 DEFB132Q7Z7B7 95 aa24.62■■□□□ 1.53
LTBP3-208ENST00000527339 ATP7BP35670 1465 aa24.61■■□□□ 1.53
LTBP3-208ENST00000527339 SEPT12Q8IYM1 358 aa24.6■■□□□ 1.53
LTBP3-208ENST00000527339 CDK19Q9BWU1 502 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 569.9 ms