RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TRPM2O94759 1503 aa16.19■□□□□ 0.18
CAPN1-208ENST00000527323 NUTM2FA1L443 756 aa16.19■□□□□ 0.18
CAPN1-208ENST00000527323 C8orf34Q49A92 452 aa16.19■□□□□ 0.18
CAPN1-208ENST00000527323 BRPF3Q9ULD4 1205 aa16.19■□□□□ 0.18
CAPN1-208ENST00000527323 SLFN5Q08AF3 891 aa16.18■□□□□ 0.18
CAPN1-208ENST00000527323 CLTCQ00610 1675 aaKnown RBP16.18■□□□□ 0.18
CAPN1-208ENST00000527323 APAF1O14727 1248 aa16.17■□□□□ 0.18
CAPN1-208ENST00000527323 FRAT1Q92837 279 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-208ENST00000527323 MROH2AA6NES4 1674 aa16.17■□□□□ 0.18
CAPN1-208ENST00000527323 SLC26A8Q96RN1 970 aa16.17■□□□□ 0.18
CAPN1-208ENST00000527323 EIF2AK4Q9P2K8 1649 aaKnown RBP16.16■□□□□ 0.18
CAPN1-208ENST00000527323 BCAR3O75815 825 aa16.16■□□□□ 0.18
CAPN1-208ENST00000527323 CAMSAP1Q5T5Y3 1602 aa16.16■□□□□ 0.18
CAPN1-208ENST00000527323 SYNMO15061 1565 aa16.14■□□□□ 0.17
CAPN1-208ENST00000527323 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
CAPN1-208ENST00000527323 WAPLQ7Z5K2 1190 aa16.14■□□□□ 0.17
CAPN1-208ENST00000527323 ZNF521Q96K83 1311 aa16.14■□□□□ 0.17
CAPN1-208ENST00000527323 FRAT2O75474 233 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-208ENST00000527323 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-208ENST00000527323 MINK1Q8N4C8 1332 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-208ENST00000527323 TNNT2P45379 298 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-208ENST00000527323 SLC52A1Q9NWF4 448 aa16.12■□□□□ 0.17
CAPN1-208ENST00000527323 MYO5BQ9ULV0 1848 aa16.12■□□□□ 0.17
CAPN1-208ENST00000527323 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-208ENST00000527323 TAOK2Q9UL54 1235 aa16.11■□□□□ 0.17
CAPN1-208ENST00000527323 VGFO15240 615 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-208ENST00000527323 CABP2Q9NPB3 220 aa16.1■□□□□ 0.17
CAPN1-208ENST00000527323 E9PSI1 815 aa16.1■□□□□ 0.17
CAPN1-208ENST00000527323 TXNDC2Q86VQ3 553 aa16.1■□□□□ 0.17
CAPN1-208ENST00000527323 KIF1BO60333 1816 aa16.09■□□□□ 0.17
CAPN1-208ENST00000527323 LTKP29376 864 aa16.09■□□□□ 0.17
CAPN1-208ENST00000527323 ARHGEF40Q8TER5 1519 aa16.09■□□□□ 0.17
CAPN1-208ENST00000527323 IGHDP01880 384 aa16.09■□□□□ 0.17
CAPN1-208ENST00000527323 PLEKHG5O94827 1062 aa16.08■□□□□ 0.16
CAPN1-208ENST00000527323 PRAM1Q96QH2 718 aa16.08■□□□□ 0.16
CAPN1-208ENST00000527323 ERVK-7P63135 1459 aa16.07■□□□□ 0.16
CAPN1-208ENST00000527323 LAMC1P11047 1609 aa16.07■□□□□ 0.16
CAPN1-208ENST00000527323 NEUROD2Q15784 382 aa16.07■□□□□ 0.16
CAPN1-208ENST00000527323 TRMT2AQ8IZ69 625 aaKnown RBP16.07■□□□□ 0.16
CAPN1-208ENST00000527323 SLC12A5Q9H2X9 1139 aa16.07■□□□□ 0.16
CAPN1-208ENST00000527323 C14orf93Q9H972 538 aaKnown RBP16.07■□□□□ 0.16
CAPN1-208ENST00000527323 POGKQ9P215 609 aa16.07■□□□□ 0.16
CAPN1-208ENST00000527323 COG6Q9Y2V7 657 aa16.07■□□□□ 0.16
CAPN1-208ENST00000527323 NCKAP5LQ9HCH0 1330 aa16.07■□□□□ 0.16
CAPN1-208ENST00000527323 LMTK2Q8IWU2 1503 aa16.06■□□□□ 0.16
CAPN1-208ENST00000527323 NKTRP30414 1462 aaKnown RBP16.06■□□□□ 0.16
CAPN1-208ENST00000527323 PANK1Q8TE04 598 aa16.05■□□□□ 0.16
CAPN1-208ENST00000527323 EIF3AQ14152 1382 aaKnown RBP16.05■□□□□ 0.16
CAPN1-208ENST00000527323 ARXQ96QS3 562 aa16.05■□□□□ 0.16
CAPN1-208ENST00000527323 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
CAPN1-208ENST00000527323 CENPJQ9HC77 1338 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-208ENST00000527323 MADDQ8WXG6 1647 aa16.05■□□□□ 0.16
CAPN1-208ENST00000527323 TNRQ92752 1358 aa16.04■□□□□ 0.16
CAPN1-208ENST00000527323 ASXL1Q8IXJ9 1541 aa16.04■□□□□ 0.16
CAPN1-208ENST00000527323 CGNL1Q0VF96 1302 aa16.04■□□□□ 0.16
CAPN1-208ENST00000527323 PIK3C2GO75747 1445 aa16.04■□□□□ 0.16
CAPN1-208ENST00000527323 SRPK2P78362 688 aaKnown RBP16.04■□□□□ 0.16
CAPN1-208ENST00000527323 TPRNQ4KMQ1 711 aa16.04■□□□□ 0.16
CAPN1-208ENST00000527323 PREX1Q8TCU6 1659 aa16.04■□□□□ 0.16
CAPN1-208ENST00000527323 SCAF11Q99590 1463 aaKnown RBP16.03■□□□□ 0.16
CAPN1-208ENST00000527323 BECN1Q14457 450 aa16.03■□□□□ 0.16
CAPN1-208ENST00000527323 CLUAP1Q96AJ1 413 aa16.03■□□□□ 0.16
CAPN1-208ENST00000527323 PDE3AQ14432 1141 aa16.03■□□□□ 0.16
CAPN1-208ENST00000527323 SLKQ9H2G2 1235 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-208ENST00000527323 PIK3C2BO00750 1634 aa16.02■□□□□ 0.15
CAPN1-208ENST00000527323 SEC24BO95487 1268 aa16.01■□□□□ 0.15
CAPN1-208ENST00000527323 STAC3Q96MF2 364 aa16.01■□□□□ 0.15
CAPN1-208ENST00000527323 ADGRB3O60242 1522 aa16.01■□□□□ 0.15
CAPN1-208ENST00000527323 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
CAPN1-208ENST00000527323 MAPK8IP3Q9UPT6 1336 aa16■□□□□ 0.15
CAPN1-208ENST00000527323 RIMS2Q9UQ26 1411 aa16■□□□□ 0.15
CAPN1-208ENST00000527323 HSPA2P54652 639 aa16■□□□□ 0.15
CAPN1-208ENST00000527323 WWC1Q8IX03 1113 aa16■□□□□ 0.15
CAPN1-208ENST00000527323 ARHGAP31Q2M1Z3 1444 aa15.99■□□□□ 0.15
CAPN1-208ENST00000527323 EIF5BO60841 1220 aaKnown RBP15.99■□□□□ 0.15
CAPN1-208ENST00000527323 FBLN1P23142 703 aa15.99■□□□□ 0.15
CAPN1-208ENST00000527323 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
CAPN1-208ENST00000527323 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
CAPN1-208ENST00000527323 UPF2Q9HAU5 1272 aaKnown RBP15.99■□□□□ 0.15
CAPN1-208ENST00000527323 NPC1L1Q9UHC9 1359 aa15.99■□□□□ 0.15
CAPN1-208ENST00000527323 METP08581 1390 aa15.98■□□□□ 0.15
CAPN1-208ENST00000527323 A2ML1A8K2U0 1454 aa15.97■□□□□ 0.15
CAPN1-208ENST00000527323 USP19O94966 1318 aa15.97■□□□□ 0.15
CAPN1-208ENST00000527323 AGLP35573 1532 aa15.97■□□□□ 0.15
CAPN1-208ENST00000527323 MORC1Q86VD1 984 aa15.97■□□□□ 0.15
CAPN1-208ENST00000527323 BCL2L13Q9BXK5 485 aa15.97■□□□□ 0.15
CAPN1-208ENST00000527323 NEXMIFQ5QGS0 1516 aa15.96■□□□□ 0.15
CAPN1-208ENST00000527323 RPGRIP1LQ68CZ1 1315 aa15.95■□□□□ 0.14
CAPN1-208ENST00000527323 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
CAPN1-208ENST00000527323 TMEM131LA2VDJ0 1609 aa15.95■□□□□ 0.14
CAPN1-208ENST00000527323 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
CAPN1-208ENST00000527323 SOX12O15370 315 aa15.93■□□□□ 0.14
CAPN1-208ENST00000527323 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.93■□□□□ 0.14
CAPN1-208ENST00000527323 TCP11L2Q8N4U5 519 aa15.93■□□□□ 0.14
CAPN1-208ENST00000527323 PPLO60437 1756 aa15.93■□□□□ 0.14
CAPN1-208ENST00000527323 RARSP54136 660 aaKnown RBP15.93■□□□□ 0.14
CAPN1-208ENST00000527323 SPRYD3Q8NCJ5 442 aa15.92■□□□□ 0.14
CAPN1-208ENST00000527323 RUNDC1Q96C34 613 aa15.92■□□□□ 0.14
CAPN1-208ENST00000527323 TNNQ9UQP3 1299 aa15.92■□□□□ 0.14
CAPN1-208ENST00000527323 PCDHB15Q9Y5E8 787 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms