RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.19
CTSB-214ENST00000527243 AHDC1Q5TGY3 1603 aaPredicted RBP16.2■□□□□ 0.18
CTSB-214ENST00000527243 PRAM1Q96QH2 718 aa16.2■□□□□ 0.18
CTSB-214ENST00000527243 NBPF1Q3BBV0 1214 aa16.19■□□□□ 0.18
CTSB-214ENST00000527243 TRAK1Q9UPV9 953 aa16.19■□□□□ 0.18
CTSB-214ENST00000527243 COL16A1Q07092 1604 aaPredicted RBP16.17■□□□□ 0.18
CTSB-214ENST00000527243 ORAI2Q96SN7 254 aa16.16■□□□□ 0.18
CTSB-214ENST00000527243 ADGRB2O60241 1585 aa16.15■□□□□ 0.18
CTSB-214ENST00000527243 NBPF8Q3BBV2 869 aa16.15■□□□□ 0.18
CTSB-214ENST00000527243 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
CTSB-214ENST00000527243 POGKQ9P215 609 aa16.14■□□□□ 0.17
CTSB-214ENST00000527243 PHLPP1O60346 1717 aa16.14■□□□□ 0.17
CTSB-214ENST00000527243 ARHGEF28Q8N1W1 1705 aaKnown RBP16.14■□□□□ 0.17
CTSB-214ENST00000527243 NHSL1Q5SYE7 1610 aa16.13■□□□□ 0.17
CTSB-214ENST00000527243 FMN2Q9NZ56 1722 aa16.13■□□□□ 0.17
CTSB-214ENST00000527243 CLSPNQ9HAW4 1339 aa16.13■□□□□ 0.17
CTSB-214ENST00000527243 GPRASP1Q5JY77 1395 aa16.13■□□□□ 0.17
CTSB-214ENST00000527243 TRPM1Q7Z4N2 1603 aa16.12■□□□□ 0.17
CTSB-214ENST00000527243 TONSLQ96HA7 1378 aa16.12■□□□□ 0.17
CTSB-214ENST00000527243 JCADQ9P266 1359 aa16.12■□□□□ 0.17
CTSB-214ENST00000527243 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
CTSB-214ENST00000527243 MED1Q15648 1581 aaPredicted RBP16.11■□□□□ 0.17
CTSB-214ENST00000527243 SOS2Q07890 1332 aaPredicted RBP16.11■□□□□ 0.17
CTSB-214ENST00000527243 ANKARQ7Z5J8 1434 aa16.1■□□□□ 0.17
CTSB-214ENST00000527243 MINK1Q8N4C8 1332 aaPredicted RBP16.09■□□□□ 0.17
CTSB-214ENST00000527243 NUTM2FA1L443 756 aa16.08■□□□□ 0.16
CTSB-214ENST00000527243 WASLO00401 505 aaPredicted RBP16.08■□□□□ 0.16
CTSB-214ENST00000527243 ESCO1Q5FWF5 840 aa16.08■□□□□ 0.16
CTSB-214ENST00000527243 HIRIP3Q9BW71 556 aaPredicted RBP16.08■□□□□ 0.16
CTSB-214ENST00000527243 PRR36Q9H6K5 1346 aa16.08■□□□□ 0.16
CTSB-214ENST00000527243 ROCK2O75116 1388 aaKnown RBP16.07■□□□□ 0.16
CTSB-214ENST00000527243 DISP3Q9P2K9 1392 aa16.07■□□□□ 0.16
CTSB-214ENST00000527243 RALGAPBQ86X10 1494 aa16.07■□□□□ 0.16
CTSB-214ENST00000527243 USP32Q8NFA0 1604 aa16.07■□□□□ 0.16
CTSB-214ENST00000527243 TULP4Q9NRJ4 1543 aa16.06■□□□□ 0.16
CTSB-214ENST00000527243 PXDNQ92626 1479 aa16.06■□□□□ 0.16
CTSB-214ENST00000527243 NPHP3Q7Z494 1330 aa16.05■□□□□ 0.16
CTSB-214ENST00000527243 CENPJQ9HC77 1338 aaPredicted RBP16.05■□□□□ 0.16
CTSB-214ENST00000527243 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
CTSB-214ENST00000527243 SHPRHQ149N8 1683 aa16.05■□□□□ 0.16
CTSB-214ENST00000527243 EIF3AQ14152 1382 aaKnown RBP16.04■□□□□ 0.16
CTSB-214ENST00000527243 PNPLA6Q8IY17 1366 aa16.04■□□□□ 0.16
CTSB-214ENST00000527243 SPATA31A6Q5VVP1 1343 aa16.04■□□□□ 0.16
CTSB-214ENST00000527243 FOXO3O43524 673 aa16.04■□□□□ 0.16
CTSB-214ENST00000527243 ATP7BP35670 1465 aa16.03■□□□□ 0.16
CTSB-214ENST00000527243 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
CTSB-214ENST00000527243 PHF8Q9UPP1 1060 aa16.03■□□□□ 0.16
CTSB-214ENST00000527243 LRP6O75581 1613 aa16.03■□□□□ 0.16
CTSB-214ENST00000527243 KIF1AQ12756 1690 aa16.02■□□□□ 0.16
CTSB-214ENST00000527243 CDK19Q9BWU1 502 aa16.01■□□□□ 0.15
CTSB-214ENST00000527243 RGPD8O14715 1765 aaPredicted RBP16■□□□□ 0.15
CTSB-214ENST00000527243 XPCQ01831 940 aaPredicted RBP15.99■□□□□ 0.15
CTSB-214ENST00000527243 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
CTSB-214ENST00000527243 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
CTSB-214ENST00000527243 RGS17Q9UGC6 210 aaPredicted RBP15.99■□□□□ 0.15
CTSB-214ENST00000527243 SBNO2Q9Y2G9 1366 aa15.99■□□□□ 0.15
CTSB-214ENST00000527243 KRT28Q7Z3Y7 464 aa15.98■□□□□ 0.15
CTSB-214ENST00000527243 SPATA31A3Q5VYP0 1347 aa15.97■□□□□ 0.15
CTSB-214ENST00000527243 PMFBP1Q8TBY8 1022 aa15.97■□□□□ 0.15
CTSB-214ENST00000527243 QRICH2Q9H0J4 1663 aa15.97■□□□□ 0.15
CTSB-214ENST00000527243 SBNO1A3KN83 1393 aa15.97■□□□□ 0.15
CTSB-214ENST00000527243 PLEKHG3A1L390 1219 aa15.96■□□□□ 0.15
CTSB-214ENST00000527243 ILDR2Q71H61 639 aa15.96■□□□□ 0.15
CTSB-214ENST00000527243 CCER1Q8TC90 406 aaPredicted RBP15.96■□□□□ 0.15
CTSB-214ENST00000527243 CCDC61Q9Y6R9 512 aa15.96■□□□□ 0.15
CTSB-214ENST00000527243 COL22A1Q8NFW1 1626 aaPredicted RBP15.96■□□□□ 0.15
CTSB-214ENST00000527243 POLR3AO14802 1390 aaPredicted RBP15.95■□□□□ 0.14
CTSB-214ENST00000527243 TOPAZ1Q8N9V7 1692 aa15.95■□□□□ 0.14
CTSB-214ENST00000527243 TNS3Q68CZ2 1445 aa15.94■□□□□ 0.14
CTSB-214ENST00000527243 PSME1Q06323 249 aa15.93■□□□□ 0.14
CTSB-214ENST00000527243 CABP2Q9NPB3 220 aa15.93■□□□□ 0.14
CTSB-214ENST00000527243 EVC2Q86UK5 1308 aa15.93■□□□□ 0.14
CTSB-214ENST00000527243 TRPM3Q9HCF6 1732 aaPredicted RBP15.92■□□□□ 0.14
CTSB-214ENST00000527243 ZEB1P37275 1124 aaPredicted RBP15.92■□□□□ 0.14
CTSB-214ENST00000527243 PHF23Q9BUL5 403 aaPredicted RBP15.92■□□□□ 0.14
CTSB-214ENST00000527243 ITSN1Q15811 1721 aa15.91■□□□□ 0.14
CTSB-214ENST00000527243 NUTM2BA6NNL0 878 aaPredicted RBP15.91■□□□□ 0.14
CTSB-214ENST00000527243 NUTM2EB1AL46 878 aaPredicted RBP15.91■□□□□ 0.14
CTSB-214ENST00000527243 SRPK2P78362 688 aaKnown RBP15.91■□□□□ 0.14
CTSB-214ENST00000527243 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
CTSB-214ENST00000527243 TESK2Q96S53 571 aa15.91■□□□□ 0.14
CTSB-214ENST00000527243 NGDNQ8NEJ9 315 aaKnown RBP15.9■□□□□ 0.14
CTSB-214ENST00000527243 ACEP12821 1306 aa15.9■□□□□ 0.14
CTSB-214ENST00000527243 ARHGEF10O15013 1369 aa15.89■□□□□ 0.13
CTSB-214ENST00000527243 PPIP5K1Q6PFW1 1433 aa15.89■□□□□ 0.13
CTSB-214ENST00000527243 POTEAQ6S8J7 498 aa15.89■□□□□ 0.13
CTSB-214ENST00000527243 ST20-MTHFSA0A0A6YYL1 179 aa15.88■□□□□ 0.13
CTSB-214ENST00000527243 ALS2Q96Q42 1657 aa15.88■□□□□ 0.13
CTSB-214ENST00000527243 MEX3CQ5U5Q3 659 aaKnown RBP15.87■□□□□ 0.13
CTSB-214ENST00000527243 CABP1Q9NZU7 370 aa15.87■□□□□ 0.13
CTSB-214ENST00000527243 ATAD2Q6PL18 1390 aa15.87■□□□□ 0.13
CTSB-214ENST00000527243 USP47Q96K76 1375 aa15.87■□□□□ 0.13
CTSB-214ENST00000527243 PUS7Q96PZ0 661 aaKnown RBP15.86■□□□□ 0.13
CTSB-214ENST00000527243 SSH2Q76I76 1423 aa15.85■□□□□ 0.13
CTSB-214ENST00000527243 ADAMTS2O95450 1211 aa15.85■□□□□ 0.13
CTSB-214ENST00000527243 AFF2P51816 1311 aa15.85■□□□□ 0.13
CTSB-214ENST00000527243 BRD4O60885 1362 aaPredicted RBP15.85■□□□□ 0.13
CTSB-214ENST00000527243 FNBP4Q8N3X1 1017 aaPredicted RBP15.84■□□□□ 0.13
CTSB-214ENST00000527243 C8orf37Q96NL8 207 aa15.84■□□□□ 0.13
CTSB-214ENST00000527243 USP6P35125 1406 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms