RNA–Protein interactions for RNA: ENST00000526955.1

PKNOX2-202, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 1 (best)

Gene PKNOX2, Length 4,531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-202ENST00000526955 KCNJ4P48050 445 aa12.86□□□□□ -0.35
PKNOX2-202ENST00000526955 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.86□□□□□ -0.35
PKNOX2-202ENST00000526955 PLEKHH1Q9ULM0 1364 aa12.86□□□□□ -0.35
PKNOX2-202ENST00000526955 DISP1Q96F81 1524 aa12.86□□□□□ -0.35
PKNOX2-202ENST00000526955 TRAK2O60296 914 aa12.86□□□□□ -0.35
PKNOX2-202ENST00000526955 ZRSR1Q15695 479 aaKnown RBP12.86□□□□□ -0.35
PKNOX2-202ENST00000526955 PANK1Q8TE04 598 aa12.86□□□□□ -0.35
PKNOX2-202ENST00000526955 HDAC5Q9UQL6 1122 aa12.86□□□□□ -0.35
PKNOX2-202ENST00000526955 C22orf23Q9BZE7 217 aa12.85□□□□□ -0.35
PKNOX2-202ENST00000526955 TARBP1Q13395 1621 aaKnown RBP12.85□□□□□ -0.35
PKNOX2-202ENST00000526955 GRIN2AQ12879 1464 aa12.85□□□□□ -0.35
PKNOX2-202ENST00000526955 CFAP44Q96MT7 982 aa12.85□□□□□ -0.35
PKNOX2-202ENST00000526955 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
PKNOX2-202ENST00000526955 CROCC2H7BZ55 1655 aa12.85□□□□□ -0.35
PKNOX2-202ENST00000526955 ZMYM3Q14202 1370 aa12.85□□□□□ -0.35
PKNOX2-202ENST00000526955 E9PCH4 1651 aa12.84□□□□□ -0.35
PKNOX2-202ENST00000526955 ASXL1Q8IXJ9 1541 aa12.84□□□□□ -0.35
PKNOX2-202ENST00000526955 MSNP26038 577 aaKnown RBP12.84□□□□□ -0.35
PKNOX2-202ENST00000526955 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
PKNOX2-202ENST00000526955 SYNJ2O15056 1496 aa12.84□□□□□ -0.35
PKNOX2-202ENST00000526955 TAF7LQ5H9L4 462 aa12.84□□□□□ -0.35
PKNOX2-202ENST00000526955 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
PKNOX2-202ENST00000526955 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
PKNOX2-202ENST00000526955 PDZRN3Q9UPQ7 1066 aa12.84□□□□□ -0.35
PKNOX2-202ENST00000526955 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.35
PKNOX2-202ENST00000526955 NCLP19338 710 aaKnown RBP12.83□□□□□ -0.36
PKNOX2-202ENST00000526955 CLCN1P35523 988 aa12.83□□□□□ -0.36
PKNOX2-202ENST00000526955 VSIG10Q8N0Z9 540 aa12.83□□□□□ -0.36
PKNOX2-202ENST00000526955 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
PKNOX2-202ENST00000526955 TPM2P07951 284 aa12.83□□□□□ -0.36
PKNOX2-202ENST00000526955 IPO8O15397 1037 aaKnown RBP12.82□□□□□ -0.36
PKNOX2-202ENST00000526955 NPC1L1Q9UHC9 1359 aa12.82□□□□□ -0.36
PKNOX2-202ENST00000526955 PSME1Q06323 249 aa12.82□□□□□ -0.36
PKNOX2-202ENST00000526955 IGHDP01880 384 aa12.81□□□□□ -0.36
PKNOX2-202ENST00000526955 TBC1D2Q9BYX2 928 aa12.81□□□□□ -0.36
PKNOX2-202ENST00000526955 ADCY10Q96PN6 1610 aa12.81□□□□□ -0.36
PKNOX2-202ENST00000526955 AMER1Q5JTC6 1135 aaPredicted RBP12.81□□□□□ -0.36
PKNOX2-202ENST00000526955 WDR63Q8IWG1 891 aa12.81□□□□□ -0.36
PKNOX2-202ENST00000526955 STK31Q9BXU1 1019 aa12.81□□□□□ -0.36
PKNOX2-202ENST00000526955 TRPM1Q7Z4N2 1603 aa12.8□□□□□ -0.36
PKNOX2-202ENST00000526955 GRPEL1Q9HAV7 217 aa12.8□□□□□ -0.36
PKNOX2-202ENST00000526955 PRDM15P57071 1507 aaPredicted RBP12.8□□□□□ -0.36
PKNOX2-202ENST00000526955 U2AF1L5P0DN76 240 aaPredicted RBP12.8□□□□□ -0.36
PKNOX2-202ENST00000526955 U2AF1Q01081 240 aaKnown RBP eCLIP12.8□□□□□ -0.36
PKNOX2-202ENST00000526955 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
PKNOX2-202ENST00000526955 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
PKNOX2-202ENST00000526955 A2MP01023 1474 aa12.8□□□□□ -0.36
PKNOX2-202ENST00000526955 ARHGEF5Q12774 1597 aa12.8□□□□□ -0.36
PKNOX2-202ENST00000526955 DDX19BQ9UMR2 479 aa12.8□□□□□ -0.36
PKNOX2-202ENST00000526955 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
PKNOX2-202ENST00000526955 SCAF11Q99590 1463 aaKnown RBP12.79□□□□□ -0.36
PKNOX2-202ENST00000526955 LAMC1P11047 1609 aa12.79□□□□□ -0.36
PKNOX2-202ENST00000526955 GORABQ5T7V8 394 aa12.79□□□□□ -0.36
PKNOX2-202ENST00000526955 CT47B1P0C2W7 299 aaPredicted RBP12.79□□□□□ -0.36
PKNOX2-202ENST00000526955 ITPRIPQ8IWB1 547 aa12.79□□□□□ -0.36
PKNOX2-202ENST00000526955 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
PKNOX2-202ENST00000526955 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
PKNOX2-202ENST00000526955 ESPNB1AK53 854 aa12.78□□□□□ -0.36
PKNOX2-202ENST00000526955 ABCC2Q92887 1545 aa12.78□□□□□ -0.36
PKNOX2-202ENST00000526955 XRCC6P12956 609 aaKnown RBP eCLIP12.78□□□□□ -0.36
PKNOX2-202ENST00000526955 WWC1Q8IX03 1113 aa12.78□□□□□ -0.36
PKNOX2-202ENST00000526955 TRMT2AQ8IZ69 625 aaKnown RBP12.78□□□□□ -0.36
PKNOX2-202ENST00000526955 NAP1L2Q9ULW6 460 aaPredicted RBP12.78□□□□□ -0.36
PKNOX2-202ENST00000526955 ARHGAP5Q13017 1502 aa12.78□□□□□ -0.36
PKNOX2-202ENST00000526955 RRAGDQ9NQL2 400 aaPredicted RBP12.77□□□□□ -0.36
PKNOX2-202ENST00000526955 TAOK2Q9UL54 1235 aa12.77□□□□□ -0.37
PKNOX2-202ENST00000526955 TRAK1Q9UPV9 953 aa12.77□□□□□ -0.37
PKNOX2-202ENST00000526955 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
PKNOX2-202ENST00000526955 RARSP54136 660 aaKnown RBP12.76□□□□□ -0.37
PKNOX2-202ENST00000526955 SYTL4Q96C24 671 aaPredicted RBP12.76□□□□□ -0.37
PKNOX2-202ENST00000526955 C1orf141Q5JVX7 400 aa12.76□□□□□ -0.37
PKNOX2-202ENST00000526955 CHMP3Q9Y3E7 222 aa12.76□□□□□ -0.37
PKNOX2-202ENST00000526955 MVPQ14764 893 aaKnown RBP12.76□□□□□ -0.37
PKNOX2-202ENST00000526955 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.76□□□□□ -0.37
PKNOX2-202ENST00000526955 RRP7AQ9Y3A4 280 aaKnown RBP12.75□□□□□ -0.37
PKNOX2-202ENST00000526955 ZNF608Q9ULD9 1512 aaPredicted RBP12.75□□□□□ -0.37
PKNOX2-202ENST00000526955 CCDC173Q0VFZ6 552 aa12.75□□□□□ -0.37
PKNOX2-202ENST00000526955 THEMISQ8N1K5 641 aaPredicted RBP12.75□□□□□ -0.37
PKNOX2-202ENST00000526955 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
PKNOX2-202ENST00000526955 BCL2L13Q9BXK5 485 aa12.74□□□□□ -0.37
PKNOX2-202ENST00000526955 LMOD3Q0VAK6 560 aa12.74□□□□□ -0.37
PKNOX2-202ENST00000526955 POGZQ7Z3K3 1410 aa12.74□□□□□ -0.37
PKNOX2-202ENST00000526955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
PKNOX2-202ENST00000526955 SYNMO15061 1565 aa12.74□□□□□ -0.37
PKNOX2-202ENST00000526955 CLSTN1O94985 981 aa12.73□□□□□ -0.37
PKNOX2-202ENST00000526955 COG3Q96JB2 828 aa12.73□□□□□ -0.37
PKNOX2-202ENST00000526955 MAP7D2Q96T17 732 aa12.73□□□□□ -0.37
PKNOX2-202ENST00000526955 A0A0U1RQG5 324 aaPredicted RBP12.73□□□□□ -0.37
PKNOX2-202ENST00000526955 SEC24BO95487 1268 aa12.73□□□□□ -0.37
PKNOX2-202ENST00000526955 ABCC10Q5T3U5 1492 aa12.73□□□□□ -0.37
PKNOX2-202ENST00000526955 ATP10BO94823 1461 aa12.72□□□□□ -0.37
PKNOX2-202ENST00000526955 TEFQ10587 303 aa12.72□□□□□ -0.37
PKNOX2-202ENST00000526955 POLR3AO14802 1390 aaPredicted RBP12.72□□□□□ -0.37
PKNOX2-202ENST00000526955 DUOX2Q9NRD8 1548 aa12.72□□□□□ -0.37
PKNOX2-202ENST00000526955 TTC5Q8N0Z6 440 aa12.72□□□□□ -0.37
PKNOX2-202ENST00000526955 KIF16BQ96L93 1317 aa12.71□□□□□ -0.37
PKNOX2-202ENST00000526955 DDX49Q9Y6V7 483 aaKnown RBP12.71□□□□□ -0.37
PKNOX2-202ENST00000526955 FSD2A1L4K1 749 aa12.71□□□□□ -0.38
PKNOX2-202ENST00000526955 ANTXR1Q9H6X2 564 aa12.71□□□□□ -0.38
PKNOX2-202ENST00000526955 USP19O94966 1318 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms