RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 DIXDC1Q155Q3 683 aa8.67□□□□□ -1.02
CTR9-203ENST00000526874 GRIPAP1Q4V328 841 aa8.67□□□□□ -1.02
CTR9-203ENST00000526874 FBXO31Q5XUX0 539 aaPredicted RBP8.67□□□□□ -1.02
CTR9-203ENST00000526874 RSPH6AQ9H0K4 717 aa8.67□□□□□ -1.02
CTR9-203ENST00000526874 SPTLC1O15269 473 aa8.66□□□□□ -1.02
CTR9-203ENST00000526874 SKIV2LQ15477 1246 aaKnown RBP8.66□□□□□ -1.02
CTR9-203ENST00000526874 QPCTQ16769 361 aa8.66□□□□□ -1.02
CTR9-203ENST00000526874 NKX2-3Q8TAU0 364 aa8.66□□□□□ -1.02
CTR9-203ENST00000526874 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
CTR9-203ENST00000526874 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
CTR9-203ENST00000526874 ZPR1O75312 459 aa8.65□□□□□ -1.02
CTR9-203ENST00000526874 NR1I2O75469 434 aa8.65□□□□□ -1.02
CTR9-203ENST00000526874 PCMTD1Q96MG8 357 aaPredicted RBP8.64□□□□□ -1.03
CTR9-203ENST00000526874 PRDM9Q9NQV7 894 aa8.63□□□□□ -1.03
CTR9-203ENST00000526874 HRCP23327 699 aa8.62□□□□□ -1.03
CTR9-203ENST00000526874 THAP11Q96EK4 314 aa8.62□□□□□ -1.03
CTR9-203ENST00000526874 NUTM2BA6NNL0 878 aaPredicted RBP8.61□□□□□ -1.03
CTR9-203ENST00000526874 NUTM2EB1AL46 878 aaPredicted RBP8.61□□□□□ -1.03
CTR9-203ENST00000526874 FMNL1O95466 1100 aaPredicted RBP8.61□□□□□ -1.03
CTR9-203ENST00000526874 ITGBL1O95965 494 aaPredicted RBP8.61□□□□□ -1.03
CTR9-203ENST00000526874 KCNC4Q03721 635 aa8.61□□□□□ -1.03
CTR9-203ENST00000526874 RTL5Q5HYW3 569 aaPredicted RBP8.61□□□□□ -1.03
CTR9-203ENST00000526874 NUTM2DQ5VT03 806 aaPredicted RBP8.61□□□□□ -1.03
CTR9-203ENST00000526874 BRICD5Q6PL45 260 aa8.61□□□□□ -1.03
CTR9-203ENST00000526874 NUTM2AQ8IVF1 878 aaPredicted RBP8.61□□□□□ -1.03
CTR9-203ENST00000526874 TSC1Q92574 1164 aa8.61□□□□□ -1.03
CTR9-203ENST00000526874 SPSB2Q99619 263 aa8.61□□□□□ -1.03
CTR9-203ENST00000526874 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.61□□□□□ -1.03
CTR9-203ENST00000526874 MTMR2Q13614 643 aa8.6□□□□□ -1.03
CTR9-203ENST00000526874 ZBTB3Q9H5J0 574 aa8.6□□□□□ -1.03
CTR9-203ENST00000526874 LILRB3O75022 631 aa8.59□□□□□ -1.03
CTR9-203ENST00000526874 ADH1BP00325 375 aa8.59□□□□□ -1.03
CTR9-203ENST00000526874 Q3C1V9 767 aa8.59□□□□□ -1.03
CTR9-203ENST00000526874 GOPCQ9HD26 462 aa8.59□□□□□ -1.03
CTR9-203ENST00000526874 PLA2G2EQ9NZK7 142 aa8.59□□□□□ -1.03
CTR9-203ENST00000526874 CFAP99D6REC4 459 aa8.58□□□□□ -1.04
CTR9-203ENST00000526874 S1PR4O95977 384 aa8.58□□□□□ -1.04
CTR9-203ENST00000526874 FAM160A2Q8N612 972 aaPredicted RBP8.58□□□□□ -1.04
CTR9-203ENST00000526874 USB1Q9BQ65 265 aaKnown RBP8.58□□□□□ -1.04
CTR9-203ENST00000526874 GJA5P36382 358 aa8.57□□□□□ -1.04
CTR9-203ENST00000526874 TRIM26Q12899 539 aaPredicted RBP8.57□□□□□ -1.04
CTR9-203ENST00000526874 RETREG3Q86VR2 466 aa8.57□□□□□ -1.04
CTR9-203ENST00000526874 PRR7Q8TB68 274 aa8.57□□□□□ -1.04
CTR9-203ENST00000526874 PPEF1O14829 653 aaPredicted RBP8.56□□□□□ -1.04
CTR9-203ENST00000526874 UBTFP17480 764 aaKnown RBP8.56□□□□□ -1.04
CTR9-203ENST00000526874 RFC5P40937 340 aa8.55□□□□□ -1.04
CTR9-203ENST00000526874 TUSC1Q2TAM9 212 aa8.55□□□□□ -1.04
CTR9-203ENST00000526874 PRPF38BQ5VTL8 546 aaKnown RBP8.55□□□□□ -1.04
CTR9-203ENST00000526874 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
CTR9-203ENST00000526874 NPM2Q86SE8 214 aaKnown RBP8.54□□□□□ -1.04
CTR9-203ENST00000526874 SALL2Q9Y467 1007 aaPredicted RBP8.54□□□□□ -1.04
CTR9-203ENST00000526874 PPP1R18Q6NYC8 613 aa8.53□□□□□ -1.04
CTR9-203ENST00000526874 PER1O15534 1290 aaPredicted RBP8.52□□□□□ -1.05
CTR9-203ENST00000526874 AP1G2O75843 785 aa8.52□□□□□ -1.05
CTR9-203ENST00000526874 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
CTR9-203ENST00000526874 PPP2R2DQ66LE6 453 aa8.52□□□□□ -1.05
CTR9-203ENST00000526874 SPDYE5A6NIY4 337 aa8.51□□□□□ -1.05
CTR9-203ENST00000526874 JUNDP17535 347 aa8.51□□□□□ -1.05
CTR9-203ENST00000526874 CTDSPL2Q05D32 466 aa8.51□□□□□ -1.05
CTR9-203ENST00000526874 CCDC24Q8N4L8 307 aa8.5□□□□□ -1.05
CTR9-203ENST00000526874 FCF1Q9Y324 198 aaKnown RBP8.5□□□□□ -1.05
CTR9-203ENST00000526874 RNF223E7ERA6 249 aa8.49□□□□□ -1.05
CTR9-203ENST00000526874 DXOO77932 396 aaKnown RBP8.49□□□□□ -1.05
CTR9-203ENST00000526874 LRRN4Q8WUT4 740 aa8.49□□□□□ -1.05
CTR9-203ENST00000526874 USP17L8P0C7I0 530 aa8.48□□□□□ -1.05
CTR9-203ENST00000526874 MMP16P51512 607 aa8.48□□□□□ -1.05
CTR9-203ENST00000526874 HELBQ8NG08 1087 aaPredicted RBP8.48□□□□□ -1.05
CTR9-203ENST00000526874 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.48□□□□□ -1.05
CTR9-203ENST00000526874 A0A0G2JS52 829 aa8.47□□□□□ -1.05
CTR9-203ENST00000526874 PLA2G2CQ5R387 149 aa8.47□□□□□ -1.05
CTR9-203ENST00000526874 NUDT12Q9BQG2 462 aa8.47□□□□□ -1.05
CTR9-203ENST00000526874 HMX1Q9NP08 348 aaPredicted RBP8.46□□□□□ -1.06
CTR9-203ENST00000526874 SNRKQ9NRH2 765 aa8.46□□□□□ -1.06
CTR9-203ENST00000526874 MAP10Q9P2G4 905 aa8.46□□□□□ -1.06
CTR9-203ENST00000526874 IFFO2Q5TF58 517 aa8.45□□□□□ -1.06
CTR9-203ENST00000526874 LYPD8Q6UX82 237 aa8.45□□□□□ -1.06
CTR9-203ENST00000526874 CTHP32929 405 aa8.44□□□□□ -1.06
CTR9-203ENST00000526874 GGCXP38435 758 aa8.44□□□□□ -1.06
CTR9-203ENST00000526874 EPS8L1Q8TE68 723 aa8.44□□□□□ -1.06
CTR9-203ENST00000526874 CCNYL3P0C7X3 344 aa8.43□□□□□ -1.06
CTR9-203ENST00000526874 PTPRNQ16849 979 aa8.43□□□□□ -1.06
CTR9-203ENST00000526874 TMEM259Q4ZIN3 620 aa8.43□□□□□ -1.06
CTR9-203ENST00000526874 DESI1Q6ICB0 168 aa8.43□□□□□ -1.06
CTR9-203ENST00000526874 PTCRAQ6ISU1 281 aaPredicted RBP8.43□□□□□ -1.06
CTR9-203ENST00000526874 NR6A1Q15406 480 aa8.42□□□□□ -1.06
CTR9-203ENST00000526874 ANKLE1Q8NAG6 615 aa8.42□□□□□ -1.06
CTR9-203ENST00000526874 F12P00748 615 aaPredicted RBP8.41□□□□□ -1.06
CTR9-203ENST00000526874 EMID1Q96A84 441 aaPredicted RBP8.41□□□□□ -1.06
CTR9-203ENST00000526874 MTMR14Q8NCE2 650 aa8.4□□□□□ -1.06
CTR9-203ENST00000526874 KCNH2Q12809 1159 aa8.39□□□□□ -1.07
CTR9-203ENST00000526874 MCM6Q14566 821 aa8.39□□□□□ -1.07
CTR9-203ENST00000526874 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
CTR9-203ENST00000526874 LIAT1Q6ZQX7 453 aa8.39□□□□□ -1.07
CTR9-203ENST00000526874 EVA1BQ9NVM1 165 aa8.39□□□□□ -1.07
CTR9-203ENST00000526874 BANK1Q8NDB2 785 aa8.38□□□□□ -1.07
CTR9-203ENST00000526874 TRIM34Q9BYJ4 488 aa8.38□□□□□ -1.07
CTR9-203ENST00000526874 UNC93B1Q9H1C4 597 aa8.38□□□□□ -1.07
CTR9-203ENST00000526874 GJD4Q96KN9 370 aaPredicted RBP8.37□□□□□ -1.07
CTR9-203ENST00000526874 PRKD2Q9BZL6 878 aa8.37□□□□□ -1.07
CTR9-203ENST00000526874 ZBTB24O43167 697 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms