RNA–Protein interactions for RNA: ENST00000526872.2

ATXN3-214, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-214ENST00000526872 BRICD5Q6PL45 260 aa10.6□□□□□ -0.71
ATXN3-214ENST00000526872 CLK2P49760 499 aaKnown RBP10.59□□□□□ -0.71
ATXN3-214ENST00000526872 KCNC4Q03721 635 aa10.58□□□□□ -0.72
ATXN3-214ENST00000526872 QPCTQ16769 361 aa10.58□□□□□ -0.72
ATXN3-214ENST00000526872 CABLES1Q8TDN4 633 aa10.58□□□□□ -0.72
ATXN3-214ENST00000526872 GJA5P36382 358 aa10.57□□□□□ -0.72
ATXN3-214ENST00000526872 GOPCQ9HD26 462 aa10.57□□□□□ -0.72
ATXN3-214ENST00000526872 HRCP23327 699 aa10.56□□□□□ -0.72
ATXN3-214ENST00000526872 FAM160A2Q8N612 972 aaPredicted RBP10.56□□□□□ -0.72
ATXN3-214ENST00000526872 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.56□□□□□ -0.72
ATXN3-214ENST00000526872 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-214ENST00000526872 RTL5Q5HYW3 569 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-214ENST00000526872 SPSB2Q99619 263 aa10.55□□□□□ -0.72
ATXN3-214ENST00000526872 PLA2G2EQ9NZK7 142 aa10.55□□□□□ -0.72
ATXN3-214ENST00000526872 SALL2Q9Y467 1007 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-214ENST00000526872 C6orf229H3BNL8 230 aa10.54□□□□□ -0.72
ATXN3-214ENST00000526872 LILRB3O75022 631 aa10.54□□□□□ -0.72
ATXN3-214ENST00000526872 TMEM132AQ24JP5 1023 aa10.54□□□□□ -0.72
ATXN3-214ENST00000526872 TUSC1Q2TAM9 212 aa10.54□□□□□ -0.72
ATXN3-214ENST00000526872 Q3C1V9 767 aa10.54□□□□□ -0.72
ATXN3-214ENST00000526872 ATP1B4Q9UN42 357 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-214ENST00000526872 PCMTD1Q96MG8 357 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-214ENST00000526872 MTMR2Q13614 643 aa10.52□□□□□ -0.73
ATXN3-214ENST00000526872 ADH1BP00325 375 aa10.51□□□□□ -0.73
ATXN3-214ENST00000526872 PRPF38BQ5VTL8 546 aaKnown RBP10.51□□□□□ -0.73
ATXN3-214ENST00000526872 USB1Q9BQ65 265 aaKnown RBP10.51□□□□□ -0.73
ATXN3-214ENST00000526872 ZBTB3Q9H5J0 574 aa10.5□□□□□ -0.73
ATXN3-214ENST00000526872 PRDM9Q9NQV7 894 aa10.5□□□□□ -0.73
ATXN3-214ENST00000526872 NUTM2BA6NNL0 878 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-214ENST00000526872 NUTM2EB1AL46 878 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-214ENST00000526872 CFAP99D6REC4 459 aa10.49□□□□□ -0.73
ATXN3-214ENST00000526872 NUTM2DQ5VT03 806 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-214ENST00000526872 RETREG3Q86VR2 466 aa10.49□□□□□ -0.73
ATXN3-214ENST00000526872 NUTM2AQ8IVF1 878 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-214ENST00000526872 S1PR4O95977 384 aa10.48□□□□□ -0.73
ATXN3-214ENST00000526872 IFFO2Q5TF58 517 aa10.48□□□□□ -0.73
ATXN3-214ENST00000526872 PRR7Q8TB68 274 aa10.48□□□□□ -0.73
ATXN3-214ENST00000526872 PPEF1O14829 653 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-214ENST00000526872 PPP2R2DQ66LE6 453 aa10.47□□□□□ -0.73
ATXN3-214ENST00000526872 SLC6A16Q9GZN6 736 aa10.47□□□□□ -0.73
ATXN3-214ENST00000526872 MSS51Q4VC12 460 aa10.46□□□□□ -0.73
ATXN3-214ENST00000526872 PPP1R18Q6NYC8 613 aa10.46□□□□□ -0.73
ATXN3-214ENST00000526872 SPDYE5A6NIY4 337 aa10.45□□□□□ -0.74
ATXN3-214ENST00000526872 RFC5P40937 340 aa10.44□□□□□ -0.74
ATXN3-214ENST00000526872 MMP16P51512 607 aa10.43□□□□□ -0.74
ATXN3-214ENST00000526872 RNF223E7ERA6 249 aa10.42□□□□□ -0.74
ATXN3-214ENST00000526872 JUNDP17535 347 aa10.42□□□□□ -0.74
ATXN3-214ENST00000526872 CTDSPL2Q05D32 466 aa10.42□□□□□ -0.74
ATXN3-214ENST00000526872 TSC1Q92574 1164 aa10.42□□□□□ -0.74
ATXN3-214ENST00000526872 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.42□□□□□ -0.74
ATXN3-214ENST00000526872 PER1O15534 1290 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-214ENST00000526872 DXOO77932 396 aaKnown RBP10.41□□□□□ -0.74
ATXN3-214ENST00000526872 A0A0G2JS52 829 aa10.4□□□□□ -0.74
ATXN3-214ENST00000526872 AP1G2O75843 785 aa10.38□□□□□ -0.75
ATXN3-214ENST00000526872 DESI1Q6ICB0 168 aa10.38□□□□□ -0.75
ATXN3-214ENST00000526872 LYPD8Q6UX82 237 aa10.38□□□□□ -0.75
ATXN3-214ENST00000526872 PLA2G2CQ5R387 149 aa10.37□□□□□ -0.75
ATXN3-214ENST00000526872 FCF1Q9Y324 198 aaKnown RBP10.37□□□□□ -0.75
ATXN3-214ENST00000526872 LRRN4Q8WUT4 740 aa10.36□□□□□ -0.75
ATXN3-214ENST00000526872 EMID1Q96A84 441 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-214ENST00000526872 GGCXP38435 758 aa10.35□□□□□ -0.75
ATXN3-214ENST00000526872 PTCRAQ6ISU1 281 aaPredicted RBP10.35□□□□□ -0.75
ATXN3-214ENST00000526872 CCDC24Q8N4L8 307 aa10.35□□□□□ -0.75
ATXN3-214ENST00000526872 ANKLE1Q8NAG6 615 aa10.35□□□□□ -0.75
ATXN3-214ENST00000526872 TMEM259Q4ZIN3 620 aa10.34□□□□□ -0.75
ATXN3-214ENST00000526872 HELBQ8NG08 1087 aaPredicted RBP10.34□□□□□ -0.75
ATXN3-214ENST00000526872 NUDT12Q9BQG2 462 aa10.34□□□□□ -0.75
ATXN3-214ENST00000526872 PTPRNQ16849 979 aa10.33□□□□□ -0.76
ATXN3-214ENST00000526872 SNRKQ9NRH2 765 aa10.33□□□□□ -0.76
ATXN3-214ENST00000526872 USP17L8P0C7I0 530 aa10.32□□□□□ -0.76
ATXN3-214ENST00000526872 HMX1Q9NP08 348 aaPredicted RBP10.32□□□□□ -0.76
ATXN3-214ENST00000526872 EVA1BQ9NVM1 165 aa10.32□□□□□ -0.76
ATXN3-214ENST00000526872 F12P00748 615 aaPredicted RBP10.31□□□□□ -0.76
ATXN3-214ENST00000526872 LIAT1Q6ZQX7 453 aa10.31□□□□□ -0.76
ATXN3-214ENST00000526872 MAP10Q9P2G4 905 aa10.31□□□□□ -0.76
ATXN3-214ENST00000526872 CCNYL3P0C7X3 344 aa10.3□□□□□ -0.76
ATXN3-214ENST00000526872 EPS8L1Q8TE68 723 aa10.3□□□□□ -0.76
ATXN3-214ENST00000526872 CTHP32929 405 aa10.29□□□□□ -0.76
ATXN3-214ENST00000526872 KCNH2Q12809 1159 aa10.29□□□□□ -0.76
ATXN3-214ENST00000526872 BANK1Q8NDB2 785 aa10.29□□□□□ -0.76
ATXN3-214ENST00000526872 NR6A1Q15406 480 aa10.28□□□□□ -0.76
ATXN3-214ENST00000526872 MTMR14Q8NCE2 650 aa10.26□□□□□ -0.77
ATXN3-214ENST00000526872 GJD4Q96KN9 370 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-214ENST00000526872 SLC19A1P41440 591 aa10.25□□□□□ -0.77
ATXN3-214ENST00000526872 TRIM34Q9BYJ4 488 aa10.25□□□□□ -0.77
ATXN3-214ENST00000526872 PRKD2Q9BZL6 878 aa10.25□□□□□ -0.77
ATXN3-214ENST00000526872 UNC93B1Q9H1C4 597 aa10.25□□□□□ -0.77
ATXN3-214ENST00000526872 GTF3C3Q9Y5Q9 886 aa10.25□□□□□ -0.77
ATXN3-214ENST00000526872 ZBTB24O43167 697 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-214ENST00000526872 BAP1Q92560 729 aa10.22□□□□□ -0.77
ATXN3-214ENST00000526872 RPIAP49247 311 aa10.21□□□□□ -0.77
ATXN3-214ENST00000526872 MCM6Q14566 821 aa10.21□□□□□ -0.77
ATXN3-214ENST00000526872 SKOR1P84550 965 aa10.2□□□□□ -0.78
ATXN3-214ENST00000526872 TRIM32Q13049 653 aa10.2□□□□□ -0.78
ATXN3-214ENST00000526872 LINC01559Q495D7 138 aa10.2□□□□□ -0.78
ATXN3-214ENST00000526872 SPRYD7Q5W111 196 aa10.2□□□□□ -0.78
ATXN3-214ENST00000526872 V9GY48 417 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-214ENST00000526872 CD2BP2O95400 341 aaKnown RBP10.18□□□□□ -0.78
ATXN3-214ENST00000526872 GPR37L1O60883 481 aa10.17□□□□□ -0.78
ATXN3-214ENST00000526872 SH3BP2P78314 561 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms