RNA–Protein interactions for RNA: ENST00000526504.5

ME3-205, Transcript of malic enzyme 3, humanhuman

TSL 2

Gene ME3, Length 1,776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-205ENST00000526504 PRAM1Q96QH2 718 aa30.68■■■□□ 2.5
ME3-205ENST00000526504 FAM135BQ49AJ0 1406 aa30.68■■■□□ 2.5
ME3-205ENST00000526504 NKTRP30414 1462 aaKnown RBP30.67■■■□□ 2.5
ME3-205ENST00000526504 POGKQ9P215 609 aa30.66■■■□□ 2.5
ME3-205ENST00000526504 WAPLQ7Z5K2 1190 aa30.65■■■□□ 2.5
ME3-205ENST00000526504 CENPJQ9HC77 1338 aaPredicted RBP30.65■■■□□ 2.5
ME3-205ENST00000526504 STRCP1A6NGW2 1772 aa30.64■■■□□ 2.5
ME3-205ENST00000526504 PLEKHH1Q9ULM0 1364 aa30.62■■■□□ 2.49
ME3-205ENST00000526504 SAFB2Q14151 953 aaKnown RBP eCLIP30.61■■■□□ 2.49
ME3-205ENST00000526504 TESK2Q96S53 571 aa30.61■■■□□ 2.49
ME3-205ENST00000526504 PROSER2Q86WR7 435 aaPredicted RBP30.61■■■□□ 2.49
ME3-205ENST00000526504 POLR3GLQ9BT43 218 aa30.6■■■□□ 2.49
ME3-205ENST00000526504 KTN1Q86UP2 1357 aaKnown RBP30.57■■■□□ 2.48
ME3-205ENST00000526504 CCDC184Q52MB2 194 aa30.55■■■□□ 2.48
ME3-205ENST00000526504 RBM33Q96EV2 1170 aaKnown RBP30.55■■■□□ 2.48
ME3-205ENST00000526504 QRICH2Q9H0J4 1663 aa30.55■■■□□ 2.48
ME3-205ENST00000526504 TMEM94Q12767 1356 aa30.53■■■□□ 2.48
ME3-205ENST00000526504 SBNO2Q9Y2G9 1366 aa30.53■■■□□ 2.48
ME3-205ENST00000526504 MINK1Q8N4C8 1332 aaPredicted RBP30.52■■■□□ 2.48
ME3-205ENST00000526504 MRS2Q9HD23 443 aa30.52■■■□□ 2.48
ME3-205ENST00000526504 LRRC7Q96NW7 1537 aa30.51■■■□□ 2.48
ME3-205ENST00000526504 LTBP4Q8N2S1 1624 aa30.51■■■□□ 2.47
ME3-205ENST00000526504 C14orf37Q86TY3 774 aa30.51■■■□□ 2.47
ME3-205ENST00000526504 DISP3Q9P2K9 1392 aa30.5■■■□□ 2.47
ME3-205ENST00000526504 NCOA3Q9Y6Q9 1424 aa30.5■■■□□ 2.47
ME3-205ENST00000526504 SLC24A1O60721 1099 aa30.49■■■□□ 2.47
ME3-205ENST00000526504 TMF1P82094 1093 aa30.49■■■□□ 2.47
ME3-205ENST00000526504 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.49■■■□□ 2.47
ME3-205ENST00000526504 ADGRL3Q9HAR2 1447 aa30.47■■■□□ 2.47
ME3-205ENST00000526504 HNRNPUQ00839 825 aaKnown RBP eCLIP30.46■■■□□ 2.47
ME3-205ENST00000526504 RALBP1Q15311 655 aa30.43■■■□□ 2.46
ME3-205ENST00000526504 EVC2Q86UK5 1308 aa30.43■■■□□ 2.46
ME3-205ENST00000526504 NALCNQ8IZF0 1738 aa30.43■■■□□ 2.46
ME3-205ENST00000526504 ADGRB2O60241 1585 aa30.43■■■□□ 2.46
ME3-205ENST00000526504 C19orf44Q9H6X5 657 aa30.41■■■□□ 2.46
ME3-205ENST00000526504 XIRP1Q702N8 1843 aaKnown RBP30.41■■■□□ 2.46
ME3-205ENST00000526504 WASLO00401 505 aaPredicted RBP30.4■■■□□ 2.46
ME3-205ENST00000526504 TULP4Q9NRJ4 1543 aa30.39■■■□□ 2.46
ME3-205ENST00000526504 PER1O15534 1290 aaPredicted RBP30.39■■■□□ 2.46
ME3-205ENST00000526504 MSH6P52701 1360 aa30.39■■■□□ 2.45
ME3-205ENST00000526504 CDK19Q9BWU1 502 aa30.38■■■□□ 2.45
ME3-205ENST00000526504 CDC42BPGQ6DT37 1551 aa30.37■■■□□ 2.45
ME3-205ENST00000526504 CDCA8Q53HL2 280 aa30.36■■■□□ 2.45
ME3-205ENST00000526504 SRPK2P78362 688 aaKnown RBP30.36■■■□□ 2.45
ME3-205ENST00000526504 FAM9BQ8IZU0 186 aa30.36■■■□□ 2.45
ME3-205ENST00000526504 SUPT16HQ9Y5B9 1047 aaKnown RBP30.36■■■□□ 2.45
ME3-205ENST00000526504 MYBBP1AQ9BQG0 1328 aaKnown RBP30.35■■■□□ 2.45
ME3-205ENST00000526504 BRD4O60885 1362 aaPredicted RBP30.35■■■□□ 2.45
ME3-205ENST00000526504 PARD3Q8TEW0 1356 aa30.35■■■□□ 2.45
ME3-205ENST00000526504 DCCP43146 1447 aa30.34■■■□□ 2.45
ME3-205ENST00000526504 ATF3P18847 181 aa30.33■■■□□ 2.45
ME3-205ENST00000526504 CABP2Q9NPB3 220 aa30.33■■■□□ 2.45
ME3-205ENST00000526504 CADPS2Q86UW7 1296 aa30.31■■■□□ 2.44
ME3-205ENST00000526504 ZBED9Q6R2W3 1325 aa30.31■■■□□ 2.44
ME3-205ENST00000526504 PUS7Q96PZ0 661 aaKnown RBP30.3■■■□□ 2.44
ME3-205ENST00000526504 FMN2Q9NZ56 1722 aa30.28■■■□□ 2.44
ME3-205ENST00000526504 NUTM2FA1L443 756 aa30.28■■■□□ 2.44
ME3-205ENST00000526504 PANK3Q9H999 370 aa30.27■■■□□ 2.44
ME3-205ENST00000526504 PNISRQ8TF01 805 aaKnown RBP30.26■■■□□ 2.44
ME3-205ENST00000526504 ATAD2Q6PL18 1390 aa30.26■■■□□ 2.43
ME3-205ENST00000526504 NUDT16Q96DE0 195 aaKnown RBP30.26■■■□□ 2.43
ME3-205ENST00000526504 TMC1Q8TDI8 760 aa30.25■■■□□ 2.43
ME3-205ENST00000526504 MYOM1P52179 1685 aa30.25■■■□□ 2.43
ME3-205ENST00000526504 ANKARQ7Z5J8 1434 aa30.25■■■□□ 2.43
ME3-205ENST00000526504 CERKQ8TCT0 537 aa30.24■■■□□ 2.43
ME3-205ENST00000526504 PRR36Q9H6K5 1346 aa30.24■■■□□ 2.43
ME3-205ENST00000526504 ATP7BP35670 1465 aa30.24■■■□□ 2.43
ME3-205ENST00000526504 IQSEC2Q5JU85 1478 aa30.23■■■□□ 2.43
ME3-205ENST00000526504 MST1RQ04912 1400 aa30.21■■■□□ 2.43
ME3-205ENST00000526504 NLRP13Q86W25 1043 aa30.21■■■□□ 2.43
ME3-205ENST00000526504 CCDC61Q9Y6R9 512 aa30.21■■■□□ 2.43
ME3-205ENST00000526504 CNGB1Q14028 1251 aaPredicted RBP30.2■■■□□ 2.43
ME3-205ENST00000526504 USP32Q8NFA0 1604 aa30.2■■■□□ 2.43
ME3-205ENST00000526504 C1orf167Q5SNV9 1468 aa30.19■■■□□ 2.42
ME3-205ENST00000526504 SLAIN2Q9P270 581 aa30.18■■■□□ 2.42
ME3-205ENST00000526504 PPIP5K1Q6PFW1 1433 aa30.16■■■□□ 2.42
ME3-205ENST00000526504 NEFLP07196 543 aa30.15■■■□□ 2.42
ME3-205ENST00000526504 CABP1Q9NZU7 370 aa30.15■■■□□ 2.42
ME3-205ENST00000526504 NINLQ9Y2I6 1382 aa30.15■■■□□ 2.42
ME3-205ENST00000526504 ESCO1Q5FWF5 840 aa30.14■■■□□ 2.42
ME3-205ENST00000526504 RGPD8O14715 1765 aaPredicted RBP30.14■■■□□ 2.42
ME3-205ENST00000526504 SLC12A5Q9H2X9 1139 aa30.13■■■□□ 2.41
ME3-205ENST00000526504 NPC1L1Q9UHC9 1359 aa30.13■■■□□ 2.41
ME3-205ENST00000526504 TOPAZ1Q8N9V7 1692 aa30.13■■■□□ 2.41
ME3-205ENST00000526504 ITSN1Q15811 1721 aa30.13■■■□□ 2.41
ME3-205ENST00000526504 TOM1O60784 492 aa30.12■■■□□ 2.41
ME3-205ENST00000526504 ORAI2Q96SN7 254 aa30.12■■■□□ 2.41
ME3-205ENST00000526504 PLEKHG3A1L390 1219 aa30.1■■■□□ 2.41
ME3-205ENST00000526504 FKBP8Q14318 412 aa30.1■■■□□ 2.41
ME3-205ENST00000526504 PHF8Q9UPP1 1060 aa30.1■■■□□ 2.41
ME3-205ENST00000526504 INSRP06213 1382 aa30.1■■■□□ 2.41
ME3-205ENST00000526504 PMFBP1Q8TBY8 1022 aa30.09■■■□□ 2.41
ME3-205ENST00000526504 KNSTRNQ9Y448 316 aa30.09■■■□□ 2.41
ME3-205ENST00000526504 UBAP1LF5GYI3 381 aa30.08■■■□□ 2.41
ME3-205ENST00000526504 CC2D1BQ5T0F9 858 aaKnown RBP30.07■■■□□ 2.4
ME3-205ENST00000526504 AMER1Q5JTC6 1135 aaPredicted RBP30.06■■■□□ 2.4
ME3-205ENST00000526504 TERF2IPQ9NYB0 399 aa30.05■■■□□ 2.4
ME3-205ENST00000526504 BRINP3Q76B58 766 aa30.05■■■□□ 2.4
ME3-205ENST00000526504 NGDNQ8NEJ9 315 aaKnown RBP30.05■■■□□ 2.4
ME3-205ENST00000526504 ACEP12821 1306 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms