RNA–Protein interactions for RNA: ENST00000526163.5

NXF1-203, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-203ENST00000526163 ROBO1Q9Y6N7 1651 aa16.35■□□□□ 0.21
NXF1-203ENST00000526163 PRAM1Q96QH2 718 aa16.35■□□□□ 0.21
NXF1-203ENST00000526163 POGKQ9P215 609 aa16.35■□□□□ 0.21
NXF1-203ENST00000526163 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
NXF1-203ENST00000526163 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
NXF1-203ENST00000526163 CDC42BPGQ6DT37 1551 aa16.34■□□□□ 0.21
NXF1-203ENST00000526163 HSPA1LP34931 641 aa16.34■□□□□ 0.21
NXF1-203ENST00000526163 PLEKHH1Q9ULM0 1364 aa16.34■□□□□ 0.21
NXF1-203ENST00000526163 MST1RQ04912 1400 aa16.34■□□□□ 0.21
NXF1-203ENST00000526163 NBPF1Q3BBV0 1214 aa16.33■□□□□ 0.2
NXF1-203ENST00000526163 TRPM1Q7Z4N2 1603 aa16.32■□□□□ 0.2
NXF1-203ENST00000526163 CCER1Q8TC90 406 aaPredicted RBP16.32■□□□□ 0.2
NXF1-203ENST00000526163 C1orf167Q5SNV9 1468 aa16.3■□□□□ 0.2
NXF1-203ENST00000526163 BRINP3Q76B58 766 aa16.3■□□□□ 0.2
NXF1-203ENST00000526163 ARHGEF28Q8N1W1 1705 aaKnown RBP16.3■□□□□ 0.2
NXF1-203ENST00000526163 ROCK2O75116 1388 aaKnown RBP16.29■□□□□ 0.2
NXF1-203ENST00000526163 SAFB2Q14151 953 aaKnown RBP eCLIP16.28■□□□□ 0.2
NXF1-203ENST00000526163 NBPF8Q3BBV2 869 aa16.28■□□□□ 0.2
NXF1-203ENST00000526163 ADGRB2O60241 1585 aa16.28■□□□□ 0.2
NXF1-203ENST00000526163 AHDC1Q5TGY3 1603 aaPredicted RBP16.27■□□□□ 0.19
NXF1-203ENST00000526163 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
NXF1-203ENST00000526163 FMN2Q9NZ56 1722 aa16.26■□□□□ 0.19
NXF1-203ENST00000526163 EIF3AQ14152 1382 aaKnown RBP16.26■□□□□ 0.19
NXF1-203ENST00000526163 PHLPP1O60346 1717 aa16.25■□□□□ 0.19
NXF1-203ENST00000526163 MINK1Q8N4C8 1332 aaPredicted RBP16.24■□□□□ 0.19
NXF1-203ENST00000526163 RALGAPBQ86X10 1494 aa16.24■□□□□ 0.19
NXF1-203ENST00000526163 CENPJQ9HC77 1338 aaPredicted RBP16.23■□□□□ 0.19
NXF1-203ENST00000526163 ANKARQ7Z5J8 1434 aa16.23■□□□□ 0.19
NXF1-203ENST00000526163 WASLO00401 505 aaPredicted RBP16.23■□□□□ 0.19
NXF1-203ENST00000526163 ESCO1Q5FWF5 840 aa16.23■□□□□ 0.19
NXF1-203ENST00000526163 ORAI2Q96SN7 254 aa16.23■□□□□ 0.19
NXF1-203ENST00000526163 NHSL1Q5SYE7 1610 aa16.23■□□□□ 0.19
NXF1-203ENST00000526163 CARD11Q9BXL7 1154 aa16.22■□□□□ 0.19
NXF1-203ENST00000526163 COL16A1Q07092 1604 aaPredicted RBP16.21■□□□□ 0.19
NXF1-203ENST00000526163 HIRIP3Q9BW71 556 aaPredicted RBP16.21■□□□□ 0.19
NXF1-203ENST00000526163 NUTM2FA1L443 756 aa16.2■□□□□ 0.18
NXF1-203ENST00000526163 KIF1AQ12756 1690 aa16.2■□□□□ 0.18
NXF1-203ENST00000526163 NPHP3Q7Z494 1330 aa16.19■□□□□ 0.18
NXF1-203ENST00000526163 TULP4Q9NRJ4 1543 aa16.19■□□□□ 0.18
NXF1-203ENST00000526163 RGPD8O14715 1765 aaPredicted RBP16.19■□□□□ 0.18
NXF1-203ENST00000526163 JCADQ9P266 1359 aa16.19■□□□□ 0.18
NXF1-203ENST00000526163 LRRC59Q96AG4 307 aaKnown RBP16.19■□□□□ 0.18
NXF1-203ENST00000526163 SOS2Q07890 1332 aaPredicted RBP16.19■□□□□ 0.18
NXF1-203ENST00000526163 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
NXF1-203ENST00000526163 CDK19Q9BWU1 502 aa16.17■□□□□ 0.18
NXF1-203ENST00000526163 PHF8Q9UPP1 1060 aa16.17■□□□□ 0.18
NXF1-203ENST00000526163 USP32Q8NFA0 1604 aa16.16■□□□□ 0.18
NXF1-203ENST00000526163 FOXO3O43524 673 aa16.16■□□□□ 0.18
NXF1-203ENST00000526163 SBNO2Q9Y2G9 1366 aa16.15■□□□□ 0.18
NXF1-203ENST00000526163 SLC24A1O60721 1099 aa16.15■□□□□ 0.18
NXF1-203ENST00000526163 DDX17Q92841 729 aaKnown RBP16.15■□□□□ 0.18
NXF1-203ENST00000526163 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
NXF1-203ENST00000526163 EVC2Q86UK5 1308 aa16.15■□□□□ 0.18
NXF1-203ENST00000526163 SHPRHQ149N8 1683 aa16.14■□□□□ 0.18
NXF1-203ENST00000526163 ITSN1Q15811 1721 aa16.14■□□□□ 0.17
NXF1-203ENST00000526163 NUDT16Q96DE0 195 aaKnown RBP16.14■□□□□ 0.17
NXF1-203ENST00000526163 CCDC61Q9Y6R9 512 aa16.14■□□□□ 0.17
NXF1-203ENST00000526163 PRR36Q9H6K5 1346 aa16.14■□□□□ 0.17
NXF1-203ENST00000526163 PSME1Q06323 249 aa16.13■□□□□ 0.17
NXF1-203ENST00000526163 ATP7BP35670 1465 aa16.12■□□□□ 0.17
NXF1-203ENST00000526163 PXDNQ92626 1479 aa16.12■□□□□ 0.17
NXF1-203ENST00000526163 SRPK2P78362 688 aaKnown RBP16.12■□□□□ 0.17
NXF1-203ENST00000526163 KRT28Q7Z3Y7 464 aa16.11■□□□□ 0.17
NXF1-203ENST00000526163 RGS17Q9UGC6 210 aaPredicted RBP16.11■□□□□ 0.17
NXF1-203ENST00000526163 PMFBP1Q8TBY8 1022 aa16.1■□□□□ 0.17
NXF1-203ENST00000526163 PLEKHG3A1L390 1219 aa16.09■□□□□ 0.17
NXF1-203ENST00000526163 PNPLA6Q8IY17 1366 aa16.09■□□□□ 0.17
NXF1-203ENST00000526163 TOPAZ1Q8N9V7 1692 aa16.08■□□□□ 0.17
NXF1-203ENST00000526163 NGDNQ8NEJ9 315 aaKnown RBP16.08■□□□□ 0.16
NXF1-203ENST00000526163 PUS7Q96PZ0 661 aaKnown RBP16.08■□□□□ 0.16
NXF1-203ENST00000526163 CABP2Q9NPB3 220 aa16.08■□□□□ 0.16
NXF1-203ENST00000526163 SBNO1A3KN83 1393 aa16.08■□□□□ 0.16
NXF1-203ENST00000526163 ST20-MTHFSA0A0A6YYL1 179 aa16.07■□□□□ 0.16
NXF1-203ENST00000526163 XPCQ01831 940 aaPredicted RBP16.07■□□□□ 0.16
NXF1-203ENST00000526163 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
NXF1-203ENST00000526163 POLR3AO14802 1390 aaPredicted RBP16.07■□□□□ 0.16
NXF1-203ENST00000526163 USP47Q96K76 1375 aa16.07■□□□□ 0.16
NXF1-203ENST00000526163 ATAD2Q6PL18 1390 aa16.06■□□□□ 0.16
NXF1-203ENST00000526163 COL22A1Q8NFW1 1626 aaPredicted RBP16.05■□□□□ 0.16
NXF1-203ENST00000526163 PPIP5K1Q6PFW1 1433 aa16.05■□□□□ 0.16
NXF1-203ENST00000526163 TESK2Q96S53 571 aa16.05■□□□□ 0.16
NXF1-203ENST00000526163 TNS3Q68CZ2 1445 aa16.04■□□□□ 0.16
NXF1-203ENST00000526163 ARHGEF10O15013 1369 aa16.04■□□□□ 0.16
NXF1-203ENST00000526163 ACEP12821 1306 aa16.04■□□□□ 0.16
NXF1-203ENST00000526163 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
NXF1-203ENST00000526163 BRD4O60885 1362 aaPredicted RBP16.03■□□□□ 0.16
NXF1-203ENST00000526163 CABP1Q9NZU7 370 aa16.03■□□□□ 0.16
NXF1-203ENST00000526163 NUTM2BA6NNL0 878 aaPredicted RBP16.02■□□□□ 0.16
NXF1-203ENST00000526163 NUTM2EB1AL46 878 aaPredicted RBP16.02■□□□□ 0.16
NXF1-203ENST00000526163 MEX3CQ5U5Q3 659 aaKnown RBP16.02■□□□□ 0.16
NXF1-203ENST00000526163 NUTM2AQ8IVF1 878 aaPredicted RBP16.02■□□□□ 0.16
NXF1-203ENST00000526163 TRPM3Q9HCF6 1732 aaPredicted RBP16.02■□□□□ 0.15
NXF1-203ENST00000526163 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
NXF1-203ENST00000526163 LRP6O75581 1613 aa16.01■□□□□ 0.15
NXF1-203ENST00000526163 TMF1P82094 1093 aa16■□□□□ 0.15
NXF1-203ENST00000526163 CDCA8Q53HL2 280 aa16■□□□□ 0.15
NXF1-203ENST00000526163 ALS2Q96Q42 1657 aa15.99■□□□□ 0.15
NXF1-203ENST00000526163 EIF4G2P78344 907 aaKnown RBP eCLIP15.99■□□□□ 0.15
NXF1-203ENST00000526163 NINLQ9Y2I6 1382 aa15.99■□□□□ 0.15
NXF1-203ENST00000526163 PAK3O75914 559 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms