RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 CHD1O14646 1710 aa10.23□□□□□ -0.77
BDNF-213ENST00000525950 CT47B1P0C2W7 299 aaPredicted RBP10.23□□□□□ -0.77
BDNF-213ENST00000525950 PUS7Q96PZ0 661 aaKnown RBP10.23□□□□□ -0.77
BDNF-213ENST00000525950 KIF1BO60333 1816 aa10.22□□□□□ -0.77
BDNF-213ENST00000525950 ADGRL1O94910 1474 aa10.22□□□□□ -0.77
BDNF-213ENST00000525950 SEC24BO95487 1268 aa10.22□□□□□ -0.77
BDNF-213ENST00000525950 LMTK2Q8IWU2 1503 aa10.22□□□□□ -0.77
BDNF-213ENST00000525950 COG6Q9Y2V7 657 aa10.22□□□□□ -0.77
BDNF-213ENST00000525950 RWDD1Q9H446 243 aaPredicted RBP10.21□□□□□ -0.77
BDNF-213ENST00000525950 FANCAO15360 1455 aa10.21□□□□□ -0.77
BDNF-213ENST00000525950 PANK1Q8TE04 598 aa10.21□□□□□ -0.78
BDNF-213ENST00000525950 MROH1Q8NDA8 1641 aa10.21□□□□□ -0.78
BDNF-213ENST00000525950 ZC3H13Q5T200 1668 aaKnown RBP10.21□□□□□ -0.78
BDNF-213ENST00000525950 CANXP27824 592 aaKnown RBP10.2□□□□□ -0.78
BDNF-213ENST00000525950 ATP7AQ04656 1500 aa10.2□□□□□ -0.78
BDNF-213ENST00000525950 ZNF518AQ6AHZ1 1483 aa10.2□□□□□ -0.78
BDNF-213ENST00000525950 EFCAB6Q5THR3 1501 aa10.19□□□□□ -0.78
BDNF-213ENST00000525950 CFAP70Q5T0N1 1121 aa10.19□□□□□ -0.78
BDNF-213ENST00000525950 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
BDNF-213ENST00000525950 NSD2O96028 1365 aa10.19□□□□□ -0.78
BDNF-213ENST00000525950 ABCA9Q8IUA7 1624 aa10.19□□□□□ -0.78
BDNF-213ENST00000525950 ADGRB2O60241 1585 aa10.19□□□□□ -0.78
BDNF-213ENST00000525950 POGKQ9P215 609 aa10.19□□□□□ -0.78
BDNF-213ENST00000525950 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
BDNF-213ENST00000525950 TBC1D2Q9BYX2 928 aa10.18□□□□□ -0.78
BDNF-213ENST00000525950 ADGRB3O60242 1522 aa10.18□□□□□ -0.78
BDNF-213ENST00000525950 ADGRF5Q8IZF2 1346 aa10.18□□□□□ -0.78
BDNF-213ENST00000525950 FSD2A1L4K1 749 aa10.18□□□□□ -0.78
BDNF-213ENST00000525950 MYH16Q9H6N6 1097 aa10.18□□□□□ -0.78
BDNF-213ENST00000525950 TCP11L2Q8N4U5 519 aa10.18□□□□□ -0.78
BDNF-213ENST00000525950 NSD3Q9BZ95 1437 aa10.18□□□□□ -0.78
BDNF-213ENST00000525950 MORC1Q86VD1 984 aa10.17□□□□□ -0.78
BDNF-213ENST00000525950 UBE2Q2Q8WVN8 375 aa10.17□□□□□ -0.78
BDNF-213ENST00000525950 ERCC6L2Q5T890 1561 aa10.17□□□□□ -0.78
BDNF-213ENST00000525950 MVPQ14764 893 aaKnown RBP10.17□□□□□ -0.78
BDNF-213ENST00000525950 ISY1Q9ULR0 285 aaKnown RBP10.17□□□□□ -0.78
BDNF-213ENST00000525950 RLBP1P12271 317 aa10.16□□□□□ -0.78
BDNF-213ENST00000525950 HDAC1Q13547 482 aaPredicted RBP10.16□□□□□ -0.78
BDNF-213ENST00000525950 CFAP53Q96M91 514 aa10.16□□□□□ -0.78
BDNF-213ENST00000525950 MROH2AA6NES4 1674 aa10.16□□□□□ -0.78
BDNF-213ENST00000525950 ADGRB1O14514 1584 aa10.16□□□□□ -0.78
BDNF-213ENST00000525950 AFAP1Q8N556 730 aa10.16□□□□□ -0.78
BDNF-213ENST00000525950 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.16□□□□□ -0.78
BDNF-213ENST00000525950 CHMP5Q9NZZ3 219 aa10.15□□□□□ -0.78
BDNF-213ENST00000525950 MCM4P33991 863 aa10.15□□□□□ -0.78
BDNF-213ENST00000525950 QRICH2Q9H0J4 1663 aa10.15□□□□□ -0.78
BDNF-213ENST00000525950 C14orf93Q9H972 538 aaKnown RBP10.15□□□□□ -0.79
BDNF-213ENST00000525950 RPGRIP1LQ68CZ1 1315 aa10.15□□□□□ -0.79
BDNF-213ENST00000525950 ZKSCAN2Q63HK3 967 aa10.14□□□□□ -0.79
BDNF-213ENST00000525950 SLKQ9H2G2 1235 aaPredicted RBP10.14□□□□□ -0.79
BDNF-213ENST00000525950 PPLO60437 1756 aa10.14□□□□□ -0.79
BDNF-213ENST00000525950 PPRC1Q5VV67 1664 aaKnown RBP10.14□□□□□ -0.79
BDNF-213ENST00000525950 IL16Q14005 1332 aa10.14□□□□□ -0.79
BDNF-213ENST00000525950 NCOA3Q9Y6Q9 1424 aa10.13□□□□□ -0.79
BDNF-213ENST00000525950 GOLGA6L3A6NEY3 463 aa10.13□□□□□ -0.79
BDNF-213ENST00000525950 DZIP1LQ8IYY4 767 aaKnown RBP10.13□□□□□ -0.79
BDNF-213ENST00000525950 UGGT1Q9NYU2 1555 aa10.13□□□□□ -0.79
BDNF-213ENST00000525950 KIF3BO15066 747 aa10.12□□□□□ -0.79
BDNF-213ENST00000525950 C22orf23Q9BZE7 217 aa10.12□□□□□ -0.79
BDNF-213ENST00000525950 ANKRD36BQ8N2N9 1353 aa10.12□□□□□ -0.79
BDNF-213ENST00000525950 SMC5Q8IY18 1101 aa10.12□□□□□ -0.79
BDNF-213ENST00000525950 ABCC11Q96J66 1382 aa10.12□□□□□ -0.79
BDNF-213ENST00000525950 NOS1P29475 1434 aa10.12□□□□□ -0.79
BDNF-213ENST00000525950 MTHFSP49914 203 aa10.12□□□□□ -0.79
BDNF-213ENST00000525950 SNX21Q969T3 373 aa10.12□□□□□ -0.79
BDNF-213ENST00000525950 DDX19BQ9UMR2 479 aa10.12□□□□□ -0.79
BDNF-213ENST00000525950 XRCC6P12956 609 aaKnown RBP eCLIP10.11□□□□□ -0.79
BDNF-213ENST00000525950 RRAGDQ9NQL2 400 aaPredicted RBP10.11□□□□□ -0.79
BDNF-213ENST00000525950 DDIT3P35638 169 aa10.11□□□□□ -0.79
BDNF-213ENST00000525950 DDX11L8A8MPP1 907 aa10.11□□□□□ -0.79
BDNF-213ENST00000525950 CLCN1P35523 988 aa10.11□□□□□ -0.79
BDNF-213ENST00000525950 MRE11P49959 708 aa10.11□□□□□ -0.79
BDNF-213ENST00000525950 RBM25P49756 843 aaKnown RBP10.1□□□□□ -0.79
BDNF-213ENST00000525950 ZNF692Q9BU19 519 aaPredicted RBP10.1□□□□□ -0.79
BDNF-213ENST00000525950 SLC12A5Q9H2X9 1139 aa10.1□□□□□ -0.79
BDNF-213ENST00000525950 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
BDNF-213ENST00000525950 TNNQ9UQP3 1299 aa10.1□□□□□ -0.79
BDNF-213ENST00000525950 PTMSP20962 102 aa10.1□□□□□ -0.79
BDNF-213ENST00000525950 RRP7AQ9Y3A4 280 aaKnown RBP10.1□□□□□ -0.79
BDNF-213ENST00000525950 MED14O60244 1454 aa10.1□□□□□ -0.79
BDNF-213ENST00000525950 KIDINS220Q9ULH0 1771 aa10.09□□□□□ -0.79
BDNF-213ENST00000525950 TRAK2O60296 914 aa10.09□□□□□ -0.79
BDNF-213ENST00000525950 FTSJ3Q8IY81 847 aaKnown RBP10.09□□□□□ -0.79
BDNF-213ENST00000525950 BRPF1P55201 1214 aaPredicted RBP10.09□□□□□ -0.79
BDNF-213ENST00000525950 NEUROD2Q15784 382 aa10.09□□□□□ -0.79
BDNF-213ENST00000525950 PLEKHF1Q96S99 279 aa10.09□□□□□ -0.79
BDNF-213ENST00000525950 ATF7IPQ6VMQ6 1270 aa10.08□□□□□ -0.8
BDNF-213ENST00000525950 COL3A1P02461 1466 aaPredicted RBP10.08□□□□□ -0.8
BDNF-213ENST00000525950 EVC2Q86UK5 1308 aa10.08□□□□□ -0.8
BDNF-213ENST00000525950 HSCBQ8IWL3 235 aa10.08□□□□□ -0.8
BDNF-213ENST00000525950 ZNF428Q96B54 188 aa10.08□□□□□ -0.8
BDNF-213ENST00000525950 TULP4Q9NRJ4 1543 aa10.07□□□□□ -0.8
BDNF-213ENST00000525950 KIF16BQ96L93 1317 aa10.07□□□□□ -0.8
BDNF-213ENST00000525950 REREQ9P2R6 1566 aa10.07□□□□□ -0.8
BDNF-213ENST00000525950 TRIM27P14373 513 aa10.07□□□□□ -0.8
BDNF-213ENST00000525950 ZBTB40Q9NUA8 1239 aa10.07□□□□□ -0.8
BDNF-213ENST00000525950 ARHGEF28Q8N1W1 1705 aaKnown RBP10.07□□□□□ -0.8
BDNF-213ENST00000525950 GLI2P10070 1586 aa10.07□□□□□ -0.8
BDNF-213ENST00000525950 ALDH1L2Q3SY69 923 aa10.07□□□□□ -0.8
BDNF-213ENST00000525950 IPO8O15397 1037 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms