RNA–Protein interactions for RNA: ENST00000525947.1

ROM1-203, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene ROM1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-203ENST00000525947 LRRC59Q96AG4 307 aaKnown RBP36.13■■■■□ 3.37
ROM1-203ENST00000525947 LRPPRCP42704 1394 aaKnown RBP36.13■■■■□ 3.37
ROM1-203ENST00000525947 TECPR2O15040 1411 aa36.09■■■■□ 3.37
ROM1-203ENST00000525947 YTHDC2Q9H6S0 1430 aaKnown RBP36.08■■■■□ 3.37
ROM1-203ENST00000525947 MYOM2P54296 1465 aa36.08■■■■□ 3.37
ROM1-203ENST00000525947 PLEKHH1Q9ULM0 1364 aa36.08■■■■□ 3.37
ROM1-203ENST00000525947 FMN2Q9NZ56 1722 aa36.07■■■■□ 3.36
ROM1-203ENST00000525947 ABCC11Q96J66 1382 aa36.06■■■■□ 3.36
ROM1-203ENST00000525947 CFAP70Q5T0N1 1121 aa36.06■■■■□ 3.36
ROM1-203ENST00000525947 NRXN1Q9ULB1 1477 aa36.05■■■■□ 3.36
ROM1-203ENST00000525947 PNPLA6Q8IY17 1366 aa36.05■■■■□ 3.36
ROM1-203ENST00000525947 NUTM2FA1L443 756 aa36.05■■■■□ 3.36
ROM1-203ENST00000525947 C14orf93Q9H972 538 aaKnown RBP36.04■■■■□ 3.36
ROM1-203ENST00000525947 ESCO1Q5FWF5 840 aa36.02■■■■□ 3.36
ROM1-203ENST00000525947 ZNF772Q68DY9 489 aaPredicted RBP35.99■■■■□ 3.35
ROM1-203ENST00000525947 SOS2Q07890 1332 aaPredicted RBP35.98■■■■□ 3.35
ROM1-203ENST00000525947 KDM2AQ9Y2K7 1162 aa35.97■■■■□ 3.35
ROM1-203ENST00000525947 DHX57Q6P158 1386 aaKnown RBP35.97■■■■□ 3.35
ROM1-203ENST00000525947 HRCP23327 699 aa35.95■■■■□ 3.35
ROM1-203ENST00000525947 AFF2P51816 1311 aa35.94■■■■□ 3.34
ROM1-203ENST00000525947 C8orf37Q96NL8 207 aa35.93■■■■□ 3.34
ROM1-203ENST00000525947 MARF1Q9Y4F3 1742 aaKnown RBP35.92■■■■□ 3.34
ROM1-203ENST00000525947 XPCQ01831 940 aaPredicted RBP35.92■■■■□ 3.34
ROM1-203ENST00000525947 COL22A1Q8NFW1 1626 aaPredicted RBP35.92■■■■□ 3.34
ROM1-203ENST00000525947 SAFB2Q14151 953 aaKnown RBP eCLIP35.91■■■■□ 3.34
ROM1-203ENST00000525947 DCAF11Q8TEB1 546 aa35.91■■■■□ 3.34
ROM1-203ENST00000525947 KIF1AQ12756 1690 aa35.91■■■■□ 3.34
ROM1-203ENST00000525947 FOXO3O43524 673 aa35.9■■■■□ 3.34
ROM1-203ENST00000525947 ADAMTS2O95450 1211 aa35.9■■■■□ 3.34
ROM1-203ENST00000525947 NPHP3Q7Z494 1330 aa35.89■■■■□ 3.34
ROM1-203ENST00000525947 PXDNQ92626 1479 aa35.88■■■■□ 3.33
ROM1-203ENST00000525947 SIRT1Q96EB6 747 aa35.88■■■■□ 3.33
ROM1-203ENST00000525947 PRAM1Q96QH2 718 aa35.87■■■■□ 3.33
ROM1-203ENST00000525947 ADGRB1O14514 1584 aa35.85■■■■□ 3.33
ROM1-203ENST00000525947 DLC1Q96QB1 1528 aa35.83■■■■□ 3.33
ROM1-203ENST00000525947 RXRBP28702 533 aa35.83■■■■□ 3.33
ROM1-203ENST00000525947 POGKQ9P215 609 aa35.82■■■■□ 3.32
ROM1-203ENST00000525947 NGLY1Q96IV0 654 aa35.81■■■■□ 3.32
ROM1-203ENST00000525947 TRAK1Q9UPV9 953 aa35.81■■■■□ 3.32
ROM1-203ENST00000525947 USP32Q8NFA0 1604 aa35.79■■■■□ 3.32
ROM1-203ENST00000525947 ARHGEF28Q8N1W1 1705 aaKnown RBP35.77■■■■□ 3.32
ROM1-203ENST00000525947 QTRT2Q9H974 415 aaKnown RBP35.76■■■■□ 3.32
ROM1-203ENST00000525947 ADGRB2O60241 1585 aa35.73■■■■□ 3.31
ROM1-203ENST00000525947 HIRIP3Q9BW71 556 aaPredicted RBP35.72■■■■□ 3.31
ROM1-203ENST00000525947 PHF8Q9UPP1 1060 aa35.72■■■■□ 3.31
ROM1-203ENST00000525947 KRT28Q7Z3Y7 464 aa35.71■■■■□ 3.31
ROM1-203ENST00000525947 MINK1Q8N4C8 1332 aaPredicted RBP35.7■■■■□ 3.31
ROM1-203ENST00000525947 STAC3Q96MF2 364 aa35.68■■■■□ 3.3
ROM1-203ENST00000525947 USP21Q9UK80 565 aa35.68■■■■□ 3.3
ROM1-203ENST00000525947 CDK12Q9NYV4 1490 aaPredicted RBP35.67■■■■□ 3.3
ROM1-203ENST00000525947 KIAA1210Q9ULL0 1709 aa35.67■■■■□ 3.3
ROM1-203ENST00000525947 RBM6P78332 1123 aaKnown RBP35.66■■■■□ 3.3
ROM1-203ENST00000525947 SPATA31A3Q5VYP0 1347 aa35.65■■■■□ 3.3
ROM1-203ENST00000525947 PMFBP1Q8TBY8 1022 aa35.64■■■■□ 3.3
ROM1-203ENST00000525947 ABCA3Q99758 1704 aa35.63■■■■□ 3.29
ROM1-203ENST00000525947 PLEKHG5O94827 1062 aa35.63■■■■□ 3.29
ROM1-203ENST00000525947 RGS12O14924 1447 aa35.62■■■■□ 3.29
ROM1-203ENST00000525947 ITSN1Q15811 1721 aa35.6■■■■□ 3.29
ROM1-203ENST00000525947 ANKARQ7Z5J8 1434 aa35.6■■■■□ 3.29
ROM1-203ENST00000525947 FNBP4Q8N3X1 1017 aaPredicted RBP35.6■■■■□ 3.29
ROM1-203ENST00000525947 PSME1Q06323 249 aa35.59■■■■□ 3.29
ROM1-203ENST00000525947 TRPM3Q9HCF6 1732 aaPredicted RBP35.59■■■■□ 3.29
ROM1-203ENST00000525947 TNS3Q68CZ2 1445 aa35.58■■■■□ 3.29
ROM1-203ENST00000525947 UPF1Q92900 1129 aaKnown RBP eCLIP35.58■■■■□ 3.29
ROM1-203ENST00000525947 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.57■■■■□ 3.29
ROM1-203ENST00000525947 LMOD2Q6P5Q4 547 aa35.57■■■■□ 3.28
ROM1-203ENST00000525947 TRPC5Q9UL62 973 aaPredicted RBP35.57■■■■□ 3.28
ROM1-203ENST00000525947 TULP4Q9NRJ4 1543 aa35.57■■■■□ 3.28
ROM1-203ENST00000525947 PRR36Q9H6K5 1346 aa35.55■■■■□ 3.28
ROM1-203ENST00000525947 WASLO00401 505 aaPredicted RBP35.54■■■■□ 3.28
ROM1-203ENST00000525947 ATRNO75882 1429 aa35.54■■■■□ 3.28
ROM1-203ENST00000525947 PLCH1Q4KWH8 1693 aa35.53■■■■□ 3.28
ROM1-203ENST00000525947 CABLES1Q8TDN4 633 aa35.53■■■■□ 3.28
ROM1-203ENST00000525947 BCL9LQ86UU0 1499 aa35.53■■■■□ 3.28
ROM1-203ENST00000525947 HAP1P54257 671 aaPredicted RBP35.52■■■■□ 3.28
ROM1-203ENST00000525947 ALS2Q96Q42 1657 aa35.52■■■■□ 3.28
ROM1-203ENST00000525947 SBNO1A3KN83 1393 aa35.51■■■■□ 3.27
ROM1-203ENST00000525947 EIF3AQ14152 1382 aaKnown RBP35.51■■■■□ 3.27
ROM1-203ENST00000525947 NBPF1Q3BBV0 1214 aa35.48■■■■□ 3.27
ROM1-203ENST00000525947 NWD2Q9ULI1 1742 aa35.45■■■■□ 3.27
ROM1-203ENST00000525947 BRWD3Q6RI45 1802 aa35.44■■■■□ 3.26
ROM1-203ENST00000525947 ARHGEF10O15013 1369 aa35.44■■■■□ 3.26
ROM1-203ENST00000525947 SIN3AQ96ST3 1273 aa35.43■■■■□ 3.26
ROM1-203ENST00000525947 SLIT2O94813 1529 aa35.42■■■■□ 3.26
ROM1-203ENST00000525947 GPRASP1Q5JY77 1395 aa35.42■■■■□ 3.26
ROM1-203ENST00000525947 TOPAZ1Q8N9V7 1692 aa35.42■■■■□ 3.26
ROM1-203ENST00000525947 QRICH2Q9H0J4 1663 aa35.42■■■■□ 3.26
ROM1-203ENST00000525947 NGDNQ8NEJ9 315 aaKnown RBP35.41■■■■□ 3.26
ROM1-203ENST00000525947 ATP7BP35670 1465 aa35.41■■■■□ 3.26
ROM1-203ENST00000525947 CRYBG1Q9Y4K1 1723 aa35.4■■■■□ 3.26
ROM1-203ENST00000525947 NUDT16Q96DE0 195 aaKnown RBP35.4■■■■□ 3.26
ROM1-203ENST00000525947 GLI3P10071 1580 aa35.39■■■■□ 3.26
ROM1-203ENST00000525947 UNC5CLQ8IV45 518 aa35.39■■■■□ 3.26
ROM1-203ENST00000525947 CDK19Q9BWU1 502 aa35.39■■■■□ 3.26
ROM1-203ENST00000525947 NEUROD1Q13562 356 aa35.38■■■■□ 3.25
ROM1-203ENST00000525947 L3MBTL2Q969R5 705 aa35.38■■■■□ 3.25
ROM1-203ENST00000525947 GJD4Q96KN9 370 aaPredicted RBP35.38■■■■□ 3.25
ROM1-203ENST00000525947 TRPM1Q7Z4N2 1603 aa35.37■■■■□ 3.25
ROM1-203ENST00000525947 PAK3O75914 559 aaPredicted RBP35.36■■■■□ 3.25
ROM1-203ENST00000525947 NRAPQ86VF7 1730 aa35.33■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms