RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 PKDCCQ504Y2 493 aa11.32□□□□□ -0.6
CSDE1-210ENST00000525878 HLA-CQ95604 372 aa11.32□□□□□ -0.6
CSDE1-210ENST00000525878 ZMYND10O75800 440 aa11.31□□□□□ -0.6
CSDE1-210ENST00000525878 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
CSDE1-210ENST00000525878 REPIN1Q9BWE0 567 aaKnown RBP11.31□□□□□ -0.6
CSDE1-210ENST00000525878 CD2BP2O95400 341 aaKnown RBP11.3□□□□□ -0.6
CSDE1-210ENST00000525878 USB1Q9BQ65 265 aaKnown RBP11.3□□□□□ -0.6
CSDE1-210ENST00000525878 DXOO77932 396 aaKnown RBP11.28□□□□□ -0.6
CSDE1-210ENST00000525878 FAM187AA6NFU0 413 aa11.27□□□□□ -0.61
CSDE1-210ENST00000525878 ZC3H15Q8WU90 426 aaKnown RBP11.27□□□□□ -0.61
CSDE1-210ENST00000525878 TOR4AQ9NXH8 423 aa11.27□□□□□ -0.61
CSDE1-210ENST00000525878 FOXC1Q12948 553 aa11.26□□□□□ -0.61
CSDE1-210ENST00000525878 ZNF787Q6DD87 383 aa11.26□□□□□ -0.61
CSDE1-210ENST00000525878 ZBTB24O43167 697 aaPredicted RBP11.24□□□□□ -0.61
CSDE1-210ENST00000525878 GUCA2AQ02747 115 aa11.24□□□□□ -0.61
CSDE1-210ENST00000525878 AMHR2Q16671 573 aa11.24□□□□□ -0.61
CSDE1-210ENST00000525878 KRI1Q8N9T8 703 aaKnown RBP11.24□□□□□ -0.61
CSDE1-210ENST00000525878 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
CSDE1-210ENST00000525878 NUTM1Q86Y26 1132 aa11.22□□□□□ -0.61
CSDE1-210ENST00000525878 TRIM32Q13049 653 aa11.21□□□□□ -0.61
CSDE1-210ENST00000525878 AAASQ9NRG9 546 aa11.21□□□□□ -0.61
CSDE1-210ENST00000525878 AVPP01185 164 aa11.2□□□□□ -0.62
CSDE1-210ENST00000525878 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
CSDE1-210ENST00000525878 SYMPKQ92797 1274 aaKnown RBP11.2□□□□□ -0.62
CSDE1-210ENST00000525878 WNT7AO00755 349 aa11.19□□□□□ -0.62
CSDE1-210ENST00000525878 SPIRE2Q8WWL2 714 aa11.19□□□□□ -0.62
CSDE1-210ENST00000525878 PCDHGC3Q9UN70 934 aa11.19□□□□□ -0.62
CSDE1-210ENST00000525878 JUNDP17535 347 aa11.18□□□□□ -0.62
CSDE1-210ENST00000525878 RETREG3Q86VR2 466 aa11.18□□□□□ -0.62
CSDE1-210ENST00000525878 CYP4X1Q8N118 509 aa11.18□□□□□ -0.62
CSDE1-210ENST00000525878 POTECB2RU33 542 aa11.17□□□□□ -0.62
CSDE1-210ENST00000525878 ST8SIA5O15466 376 aa11.17□□□□□ -0.62
CSDE1-210ENST00000525878 FDX1P10109 184 aa11.17□□□□□ -0.62
CSDE1-210ENST00000525878 TTLL12Q14166 644 aaPredicted RBP11.16□□□□□ -0.62
CSDE1-210ENST00000525878 GIGYF2Q6Y7W6 1299 aaKnown RBP11.16□□□□□ -0.62
CSDE1-210ENST00000525878 MOXD2PA6NHM9 499 aa11.13□□□□□ -0.63
CSDE1-210ENST00000525878 SMCPP49901 116 aaPredicted RBP11.13□□□□□ -0.63
CSDE1-210ENST00000525878 CCDC24Q8N4L8 307 aa11.13□□□□□ -0.63
CSDE1-210ENST00000525878 SNIP1Q8TAD8 396 aaKnown RBP11.13□□□□□ -0.63
CSDE1-210ENST00000525878 ZNF775Q96BV0 537 aaPredicted RBP11.13□□□□□ -0.63
CSDE1-210ENST00000525878 MRGPRX2Q96LB1 330 aa11.13□□□□□ -0.63
CSDE1-210ENST00000525878 NDUFV2P19404 249 aa11.12□□□□□ -0.63
CSDE1-210ENST00000525878 SKOR1P84550 965 aa11.12□□□□□ -0.63
CSDE1-210ENST00000525878 CTC1Q2NKJ3 1217 aa11.12□□□□□ -0.63
CSDE1-210ENST00000525878 PARP9Q8IXQ6 854 aa11.12□□□□□ -0.63
CSDE1-210ENST00000525878 TTC24A2A3L6 582 aaPredicted RBP11.11□□□□□ -0.63
CSDE1-210ENST00000525878 TRIM66O15016 1216 aa11.11□□□□□ -0.63
CSDE1-210ENST00000525878 SMPD1P17405 629 aa11.11□□□□□ -0.63
CSDE1-210ENST00000525878 WNT7BP56706 349 aa11.11□□□□□ -0.63
CSDE1-210ENST00000525878 C6orf229H3BNL8 230 aa11.1□□□□□ -0.63
CSDE1-210ENST00000525878 PTCRAQ6ISU1 281 aaPredicted RBP11.1□□□□□ -0.63
CSDE1-210ENST00000525878 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
CSDE1-210ENST00000525878 BEGAINQ9BUH8 593 aa11.1□□□□□ -0.63
CSDE1-210ENST00000525878 GJA5P36382 358 aa11.09□□□□□ -0.63
CSDE1-210ENST00000525878 DACH1Q9UI36 760 aa11.09□□□□□ -0.63
CSDE1-210ENST00000525878 AXIN1O15169 862 aa11.08□□□□□ -0.64
CSDE1-210ENST00000525878 RC3H1Q5TC82 1133 aaKnown RBP11.08□□□□□ -0.64
CSDE1-210ENST00000525878 AK7Q96M32 723 aa11.08□□□□□ -0.64
CSDE1-210ENST00000525878 MS4A1P11836 297 aa11.07□□□□□ -0.64
CSDE1-210ENST00000525878 J3QL48 77 aa11.06□□□□□ -0.64
CSDE1-210ENST00000525878 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
CSDE1-210ENST00000525878 SPDYE5A6NIY4 337 aa11.05□□□□□ -0.64
CSDE1-210ENST00000525878 CCNYL3P0C7X3 344 aa11.05□□□□□ -0.64
CSDE1-210ENST00000525878 MTMR2Q13614 643 aa11.05□□□□□ -0.64
CSDE1-210ENST00000525878 PTPRNQ16849 979 aa11.05□□□□□ -0.64
CSDE1-210ENST00000525878 DESI1Q6ICB0 168 aa11.05□□□□□ -0.64
CSDE1-210ENST00000525878 DIXDC1Q155Q3 683 aa11.04□□□□□ -0.64
CSDE1-210ENST00000525878 RSBN1LQ6PCB5 846 aaPredicted RBP11.04□□□□□ -0.64
CSDE1-210ENST00000525878 PRR7Q8TB68 274 aa11.04□□□□□ -0.64
CSDE1-210ENST00000525878 EVA1BQ9NVM1 165 aa11.04□□□□□ -0.64
CSDE1-210ENST00000525878 SPTLC1O15269 473 aa11.02□□□□□ -0.65
CSDE1-210ENST00000525878 SIAH2O43255 324 aa11.02□□□□□ -0.65
CSDE1-210ENST00000525878 HPS1Q92902 700 aa11.01□□□□□ -0.65
CSDE1-210ENST00000525878 GMPR2Q9P2T1 348 aaKnown RBP11.01□□□□□ -0.65
CSDE1-210ENST00000525878 PCDHB15Q9Y5E8 787 aa11□□□□□ -0.65
CSDE1-210ENST00000525878 SH3BP2P78314 561 aa10.99□□□□□ -0.65
CSDE1-210ENST00000525878 PDE4DQ08499 809 aa10.99□□□□□ -0.65
CSDE1-210ENST00000525878 KCNH2Q12809 1159 aa10.99□□□□□ -0.65
CSDE1-210ENST00000525878 UNC93B1Q9H1C4 597 aa10.99□□□□□ -0.65
CSDE1-210ENST00000525878 LCE2AQ5TA79 106 aaPredicted RBP10.97□□□□□ -0.65
CSDE1-210ENST00000525878 PRPF38BQ5VTL8 546 aaKnown RBP10.97□□□□□ -0.65
CSDE1-210ENST00000525878 ATP13A2Q9NQ11 1180 aa10.97□□□□□ -0.65
CSDE1-210ENST00000525878 CFAP99D6REC4 459 aa10.96□□□□□ -0.65
CSDE1-210ENST00000525878 HRCP23327 699 aa10.96□□□□□ -0.65
CSDE1-210ENST00000525878 LYPD8Q6UX82 237 aa10.96□□□□□ -0.65
CSDE1-210ENST00000525878 RIC3Q7Z5B4 369 aa10.96□□□□□ -0.65
CSDE1-210ENST00000525878 EHBP1Q8NDI1 1231 aa10.96□□□□□ -0.65
CSDE1-210ENST00000525878 ALDH1A1P00352 501 aa10.95□□□□□ -0.66
CSDE1-210ENST00000525878 ZBTB3Q9H5J0 574 aa10.95□□□□□ -0.66
CSDE1-210ENST00000525878 SLC24A3Q9HC58 644 aa10.95□□□□□ -0.66
CSDE1-210ENST00000525878 C11orf95C9JLR9 678 aaPredicted RBP10.94□□□□□ -0.66
CSDE1-210ENST00000525878 TUSC1Q2TAM9 212 aa10.94□□□□□ -0.66
CSDE1-210ENST00000525878 BAP1Q92560 729 aa10.94□□□□□ -0.66
CSDE1-210ENST00000525878 MYSM1Q5VVJ2 828 aa10.92□□□□□ -0.66
CSDE1-210ENST00000525878 TREML4Q6UXN2 200 aa10.92□□□□□ -0.66
CSDE1-210ENST00000525878 ZNF511Q8NB15 262 aa10.92□□□□□ -0.66
CSDE1-210ENST00000525878 F12P00748 615 aaPredicted RBP10.91□□□□□ -0.66
CSDE1-210ENST00000525878 LINC01559Q495D7 138 aa10.91□□□□□ -0.66
CSDE1-210ENST00000525878 MPNDQ8N594 471 aa10.91□□□□□ -0.66
CSDE1-210ENST00000525878 CABLES1Q8TDN4 633 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms