RNA–Protein interactions for RNA: ENST00000525832.2

AP003028.1-203, humanhuman

TSL 3 BASIC

Gene AP003028.1, Length 444 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003028.1-203ENST00000525832 SEMA3EO15041 775 aa11.72□□□□□ -0.53
AP003028.1-203ENST00000525832 AMER1Q5JTC6 1135 aaPredicted RBP11.72□□□□□ -0.53
AP003028.1-203ENST00000525832 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
AP003028.1-203ENST00000525832 TRIM47Q96LD4 638 aa11.72□□□□□ -0.53
AP003028.1-203ENST00000525832 SULF1Q8IWU6 871 aa11.71□□□□□ -0.53
AP003028.1-203ENST00000525832 GNPATO15228 680 aa11.7□□□□□ -0.54
AP003028.1-203ENST00000525832 SNRPBP14678 240 aaKnown RBP11.7□□□□□ -0.54
AP003028.1-203ENST00000525832 TRIM32Q13049 653 aa11.69□□□□□ -0.54
AP003028.1-203ENST00000525832 LCE2CQ5TA81 110 aa11.69□□□□□ -0.54
AP003028.1-203ENST00000525832 GRIPAP1Q4V328 841 aa11.68□□□□□ -0.54
AP003028.1-203ENST00000525832 RNF19BQ6ZMZ0 732 aa11.67□□□□□ -0.54
AP003028.1-203ENST00000525832 KIFC2Q96AC6 838 aa11.67□□□□□ -0.54
AP003028.1-203ENST00000525832 MRGPRX2Q96LB1 330 aa11.67□□□□□ -0.54
AP003028.1-203ENST00000525832 FECHP22830 423 aa11.66□□□□□ -0.54
AP003028.1-203ENST00000525832 MMP16P51512 607 aa11.66□□□□□ -0.54
AP003028.1-203ENST00000525832 REPIN1Q9BWE0 567 aaKnown RBP11.66□□□□□ -0.54
AP003028.1-203ENST00000525832 J3QL48 77 aa11.65□□□□□ -0.54
AP003028.1-203ENST00000525832 Q3C1V9 767 aa11.64□□□□□ -0.55
AP003028.1-203ENST00000525832 RBM26Q5T8P6 1007 aaKnown RBP11.63□□□□□ -0.55
AP003028.1-203ENST00000525832 GPR37O15354 613 aa11.61□□□□□ -0.55
AP003028.1-203ENST00000525832 SMYD5Q6GMV2 418 aa11.61□□□□□ -0.55
AP003028.1-203ENST00000525832 NLRP7Q8WX94 980 aa11.61□□□□□ -0.55
AP003028.1-203ENST00000525832 HPS1Q92902 700 aa11.61□□□□□ -0.55
AP003028.1-203ENST00000525832 TESPA1A2RU30 521 aaPredicted RBP11.6□□□□□ -0.55
AP003028.1-203ENST00000525832 PHOX2BQ99453 314 aa11.59□□□□□ -0.55
AP003028.1-203ENST00000525832 FAM181BA6NEQ2 426 aa11.58□□□□□ -0.56
AP003028.1-203ENST00000525832 DXOO77932 396 aaKnown RBP11.58□□□□□ -0.56
AP003028.1-203ENST00000525832 SLC16A10Q8TF71 515 aa11.58□□□□□ -0.56
AP003028.1-203ENST00000525832 WNT7BP56706 349 aa11.56□□□□□ -0.56
AP003028.1-203ENST00000525832 RC3H1Q5TC82 1133 aaKnown RBP11.56□□□□□ -0.56
AP003028.1-203ENST00000525832 USB1Q9BQ65 265 aaKnown RBP11.56□□□□□ -0.56
AP003028.1-203ENST00000525832 RTN4Q9NQC3 1192 aaKnown RBP11.56□□□□□ -0.56
AP003028.1-203ENST00000525832 SKOR1P84550 965 aa11.53□□□□□ -0.56
AP003028.1-203ENST00000525832 NPAS3Q8IXF0 933 aa11.53□□□□□ -0.56
AP003028.1-203ENST00000525832 NXF1Q9UBU9 619 aaKnown RBP11.53□□□□□ -0.56
AP003028.1-203ENST00000525832 CD46P15529 392 aa11.51□□□□□ -0.57
AP003028.1-203ENST00000525832 KDM4AO75164 1064 aa11.5□□□□□ -0.57
AP003028.1-203ENST00000525832 CCDC24Q8N4L8 307 aa11.5□□□□□ -0.57
AP003028.1-203ENST00000525832 LORP23490 312 aaPredicted RBP11.48□□□□□ -0.57
AP003028.1-203ENST00000525832 IRF7Q92985 503 aa11.48□□□□□ -0.57
AP003028.1-203ENST00000525832 ALDH1A1P00352 501 aa11.47□□□□□ -0.57
AP003028.1-203ENST00000525832 GMPRP36959 345 aa11.47□□□□□ -0.57
AP003028.1-203ENST00000525832 USP46P62068 366 aa11.47□□□□□ -0.57
AP003028.1-203ENST00000525832 ZSCAN1Q8NBB4 408 aa11.47□□□□□ -0.57
AP003028.1-203ENST00000525832 SIAH2O43255 324 aa11.45□□□□□ -0.58
AP003028.1-203ENST00000525832 TRIM46Q7Z4K8 759 aa11.43□□□□□ -0.58
AP003028.1-203ENST00000525832 LOC100996750A0A140TA64 210 aa11.42□□□□□ -0.58
AP003028.1-203ENST00000525832 H3BM21 787 aa11.42□□□□□ -0.58
AP003028.1-203ENST00000525832 CAPN5O15484 640 aaPredicted RBP11.42□□□□□ -0.58
AP003028.1-203ENST00000525832 KRTAP4-6Q9BYQ5 205 aa11.42□□□□□ -0.58
AP003028.1-203ENST00000525832 JUNDP17535 347 aa11.41□□□□□ -0.58
AP003028.1-203ENST00000525832 HOXA2O43364 376 aa11.39□□□□□ -0.59
AP003028.1-203ENST00000525832 BMP1P13497 986 aa11.39□□□□□ -0.59
AP003028.1-203ENST00000525832 GPIHBP1Q8IV16 184 aa11.39□□□□□ -0.59
AP003028.1-203ENST00000525832 EHBP1Q8NDI1 1231 aa11.39□□□□□ -0.59
AP003028.1-203ENST00000525832 HLA-CQ95604 372 aa11.39□□□□□ -0.59
AP003028.1-203ENST00000525832 WASF2Q9Y6W5 498 aa11.39□□□□□ -0.59
AP003028.1-203ENST00000525832 PTCRAQ6ISU1 281 aaPredicted RBP11.36□□□□□ -0.59
AP003028.1-203ENST00000525832 NUDT12Q9BQG2 462 aa11.36□□□□□ -0.59
AP003028.1-203ENST00000525832 ZCCHC6Q5VYS8 1495 aaKnown RBP11.36□□□□□ -0.59
AP003028.1-203ENST00000525832 ERBB4Q15303 1308 aa11.35□□□□□ -0.59
AP003028.1-203ENST00000525832 VEGFBP49765 207 aa11.35□□□□□ -0.59
AP003028.1-203ENST00000525832 MAP2K5Q13163 448 aa11.34□□□□□ -0.59
AP003028.1-203ENST00000525832 RETREG3Q86VR2 466 aa11.33□□□□□ -0.6
AP003028.1-203ENST00000525832 SH3BP2P78314 561 aa11.32□□□□□ -0.6
AP003028.1-203ENST00000525832 ZFP42Q96MM3 310 aa11.32□□□□□ -0.6
AP003028.1-203ENST00000525832 MDM2Q00987 491 aaPredicted RBP11.31□□□□□ -0.6
AP003028.1-203ENST00000525832 GUCA2AQ02747 115 aa11.31□□□□□ -0.6
AP003028.1-203ENST00000525832 SYMPKQ92797 1274 aaKnown RBP11.31□□□□□ -0.6
AP003028.1-203ENST00000525832 IRF6O14896 467 aa11.3□□□□□ -0.6
AP003028.1-203ENST00000525832 MPNDQ8N594 471 aa11.28□□□□□ -0.6
AP003028.1-203ENST00000525832 CCNYL3P0C7X3 344 aa11.27□□□□□ -0.61
AP003028.1-203ENST00000525832 PLEKHG3A1L390 1219 aa11.26□□□□□ -0.61
AP003028.1-203ENST00000525832 VSIG8P0DPA2 414 aa11.26□□□□□ -0.61
AP003028.1-203ENST00000525832 MS4A1P11836 297 aa11.25□□□□□ -0.61
AP003028.1-203ENST00000525832 MINK1Q8N4C8 1332 aaPredicted RBP11.25□□□□□ -0.61
AP003028.1-203ENST00000525832 SCARF1Q14162 830 aa11.24□□□□□ -0.61
AP003028.1-203ENST00000525832 MRPL14Q6P1L8 145 aaKnown RBP11.24□□□□□ -0.61
AP003028.1-203ENST00000525832 NUTM1Q86Y26 1132 aa11.24□□□□□ -0.61
AP003028.1-203ENST00000525832 EVA1BQ9NVM1 165 aa11.24□□□□□ -0.61
AP003028.1-203ENST00000525832 PTPRNQ16849 979 aa11.23□□□□□ -0.61
AP003028.1-203ENST00000525832 UNC93B1Q9H1C4 597 aa11.23□□□□□ -0.61
AP003028.1-203ENST00000525832 GPCPD1Q9NPB8 672 aa11.23□□□□□ -0.61
AP003028.1-203ENST00000525832 FAM217BQ9NTX9 383 aaPredicted RBP11.23□□□□□ -0.61
AP003028.1-203ENST00000525832 VARSP26640 1264 aaKnown RBP11.22□□□□□ -0.61
AP003028.1-203ENST00000525832 CLCN1P35523 988 aa11.22□□□□□ -0.61
AP003028.1-203ENST00000525832 NNTQ13423 1086 aa11.22□□□□□ -0.61
AP003028.1-203ENST00000525832 TLL2Q9Y6L7 1015 aa11.22□□□□□ -0.61
AP003028.1-203ENST00000525832 FDX1P10109 184 aa11.21□□□□□ -0.61
AP003028.1-203ENST00000525832 SUZ12Q15022 739 aaKnown RBP11.2□□□□□ -0.62
AP003028.1-203ENST00000525832 BAP1Q92560 729 aa11.2□□□□□ -0.62
AP003028.1-203ENST00000525832 PCDHGC3Q9UN70 934 aa11.2□□□□□ -0.62
AP003028.1-203ENST00000525832 C6orf229H3BNL8 230 aa11.19□□□□□ -0.62
AP003028.1-203ENST00000525832 ADH1CP00326 375 aa11.19□□□□□ -0.62
AP003028.1-203ENST00000525832 TIMP2P16035 220 aa11.19□□□□□ -0.62
AP003028.1-203ENST00000525832 KCNH2Q12809 1159 aa11.19□□□□□ -0.62
AP003028.1-203ENST00000525832 PURBQ96QR8 312 aaKnown RBP11.19□□□□□ -0.62
AP003028.1-203ENST00000525832 KCNMA1Q12791 1236 aa11.18□□□□□ -0.62
AP003028.1-203ENST00000525832 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
AP003028.1-203ENST00000525832 ZNF511Q8NB15 262 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms