RNA–Protein interactions for RNA: ENST00000525799.1

PTPN22-206, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 2,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-206ENST00000525799 TLL1O43897 1013 aa4.07□□□□□ -1.76
PTPN22-206ENST00000525799 LIAT1Q6ZQX7 453 aa4.07□□□□□ -1.76
PTPN22-206ENST00000525799 TRIM47Q96LD4 638 aa4.07□□□□□ -1.76
PTPN22-206ENST00000525799 GDF11O95390 407 aa4.06□□□□□ -1.76
PTPN22-206ENST00000525799 SLC10A3P09131 477 aa4.06□□□□□ -1.76
PTPN22-206ENST00000525799 LMOD2Q6P5Q4 547 aa4.06□□□□□ -1.76
PTPN22-206ENST00000525799 ANKLE1Q8NAG6 615 aa4.06□□□□□ -1.76
PTPN22-206ENST00000525799 IRF7Q92985 503 aa4.06□□□□□ -1.76
PTPN22-206ENST00000525799 FECHP22830 423 aa4.06□□□□□ -1.76
PTPN22-206ENST00000525799 SENP2Q9HC62 589 aa4.06□□□□□ -1.76
PTPN22-206ENST00000525799 GPIHBP1Q8IV16 184 aa4.05□□□□□ -1.76
PTPN22-206ENST00000525799 RASSF7Q02833 373 aa4.04□□□□□ -1.76
PTPN22-206ENST00000525799 ATP13A2Q9NQ11 1180 aa4.04□□□□□ -1.76
PTPN22-206ENST00000525799 NR1I2O75469 434 aa4.03□□□□□ -1.76
PTPN22-206ENST00000525799 ADH1BP00325 375 aa4.03□□□□□ -1.76
PTPN22-206ENST00000525799 PKD2L1Q9P0L9 805 aa4.03□□□□□ -1.76
PTPN22-206ENST00000525799 NXF1Q9UBU9 619 aaKnown RBP4.03□□□□□ -1.76
PTPN22-206ENST00000525799 S1PR4O95977 384 aa4.03□□□□□ -1.76
PTPN22-206ENST00000525799 IGHA1P01876 353 aa4.03□□□□□ -1.76
PTPN22-206ENST00000525799 RSPH4AQ5TD94 716 aa4.03□□□□□ -1.76
PTPN22-206ENST00000525799 DAXXQ9UER7 740 aaPredicted RBP4.03□□□□□ -1.76
PTPN22-206ENST00000525799 FOXC1Q12948 553 aa4.02□□□□□ -1.77
PTPN22-206ENST00000525799 NPAS3Q8IXF0 933 aa4.02□□□□□ -1.77
PTPN22-206ENST00000525799 RDH13Q8NBN7 331 aa4.02□□□□□ -1.77
PTPN22-206ENST00000525799 NLRP7Q8WX94 980 aa4.02□□□□□ -1.77
PTPN22-206ENST00000525799 PUS10Q3MIT2 529 aaKnown RBP4.01□□□□□ -1.77
PTPN22-206ENST00000525799 KIFC2Q96AC6 838 aa4.01□□□□□ -1.77
PTPN22-206ENST00000525799 PHOX2BQ99453 314 aa4.01□□□□□ -1.77
PTPN22-206ENST00000525799 TOR4AQ9NXH8 423 aa4.01□□□□□ -1.77
PTPN22-206ENST00000525799 DDX11L8A8MPP1 907 aa4.01□□□□□ -1.77
PTPN22-206ENST00000525799 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
PTPN22-206ENST00000525799 GPAT2Q6NUI2 795 aa4.01□□□□□ -1.77
PTPN22-206ENST00000525799 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
PTPN22-206ENST00000525799 SLC6A16Q9GZN6 736 aa4.01□□□□□ -1.77
PTPN22-206ENST00000525799 PPEF1O14829 653 aaPredicted RBP4□□□□□ -1.77
PTPN22-206ENST00000525799 FUT2Q10981 343 aa4□□□□□ -1.77
PTPN22-206ENST00000525799 SULF1Q8IWU6 871 aa4□□□□□ -1.77
PTPN22-206ENST00000525799 SCUBE3Q8IX30 993 aa4□□□□□ -1.77
PTPN22-206ENST00000525799 RNF225M0QZC1 329 aaPredicted RBP4□□□□□ -1.77
PTPN22-206ENST00000525799 TULP1O00294 542 aaPredicted RBP4□□□□□ -1.77
PTPN22-206ENST00000525799 MAP2K5Q13163 448 aa4□□□□□ -1.77
PTPN22-206ENST00000525799 SPSB2Q99619 263 aa4□□□□□ -1.77
PTPN22-206ENST00000525799 MORN1Q5T089 497 aa3.99□□□□□ -1.77
PTPN22-206ENST00000525799 CYP4X1Q8N118 509 aa3.99□□□□□ -1.77
PTPN22-206ENST00000525799 GCGRP47871 477 aa3.98□□□□□ -1.77
PTPN22-206ENST00000525799 ATP6V1AP38606 617 aa3.98□□□□□ -1.77
PTPN22-206ENST00000525799 ERBB4Q15303 1308 aa3.98□□□□□ -1.77
PTPN22-206ENST00000525799 PLA2G2CQ5R387 149 aa3.98□□□□□ -1.77
PTPN22-206ENST00000525799 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
PTPN22-206ENST00000525799 H3BM21 787 aa3.97□□□□□ -1.77
PTPN22-206ENST00000525799 ADAM23O75077 832 aa3.97□□□□□ -1.77
PTPN22-206ENST00000525799 PRKCSHP14314 528 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-206ENST00000525799 THAP11Q96EK4 314 aa3.97□□□□□ -1.77
PTPN22-206ENST00000525799 SLC27A5Q9Y2P5 690 aa3.97□□□□□ -1.77
PTPN22-206ENST00000525799 DNMT3AQ9Y6K1 912 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-206ENST00000525799 FMNL1O95466 1100 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-206ENST00000525799 CD46P15529 392 aa3.97□□□□□ -1.77
PTPN22-206ENST00000525799 CCDC102AQ96A19 550 aa3.96□□□□□ -1.78
PTPN22-206ENST00000525799 PRDM9Q9NQV7 894 aa3.96□□□□□ -1.78
PTPN22-206ENST00000525799 FCF1Q9Y324 198 aaKnown RBP3.96□□□□□ -1.78
PTPN22-206ENST00000525799 SALL2Q9Y467 1007 aaPredicted RBP3.96□□□□□ -1.78
PTPN22-206ENST00000525799 IRF6O14896 467 aa3.95□□□□□ -1.78
PTPN22-206ENST00000525799 VEGFBP49765 207 aa3.95□□□□□ -1.78
PTPN22-206ENST00000525799 FOXK2Q01167 660 aa3.95□□□□□ -1.78
PTPN22-206ENST00000525799 GRIPAP1Q4V328 841 aa3.95□□□□□ -1.78
PTPN22-206ENST00000525799 MSS51Q4VC12 460 aa3.95□□□□□ -1.78
PTPN22-206ENST00000525799 RNF19BQ6ZMZ0 732 aa3.95□□□□□ -1.78
PTPN22-206ENST00000525799 MINK1Q8N4C8 1332 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-206ENST00000525799 MDM2Q00987 491 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-206ENST00000525799 BRICD5Q6PL45 260 aa3.95□□□□□ -1.78
PTPN22-206ENST00000525799 FAM160A2Q8N612 972 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-206ENST00000525799 RPIAP49247 311 aa3.94□□□□□ -1.78
PTPN22-206ENST00000525799 Q8N3U1 123 aa3.94□□□□□ -1.78
PTPN22-206ENST00000525799 KDM4AO75164 1064 aa3.94□□□□□ -1.78
PTPN22-206ENST00000525799 CD2BP2O95400 341 aaKnown RBP3.94□□□□□ -1.78
PTPN22-206ENST00000525799 TPRNQ4KMQ1 711 aa3.94□□□□□ -1.78
PTPN22-206ENST00000525799 Q3C1V9 767 aa3.93□□□□□ -1.78
PTPN22-206ENST00000525799 GPCPD1Q9NPB8 672 aa3.93□□□□□ -1.78
PTPN22-206ENST00000525799 HOXA2O43364 376 aa3.92□□□□□ -1.78
PTPN22-206ENST00000525799 CLCN1P35523 988 aa3.92□□□□□ -1.78
PTPN22-206ENST00000525799 USP46P62068 366 aa3.92□□□□□ -1.78
PTPN22-206ENST00000525799 TTC24A2A3L6 582 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-206ENST00000525799 MMP16P51512 607 aa3.92□□□□□ -1.78
PTPN22-206ENST00000525799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPN22-206ENST00000525799 HLA-CQ95604 372 aa3.92□□□□□ -1.78
PTPN22-206ENST00000525799 FAM217BQ9NTX9 383 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-206ENST00000525799 DXOO77932 396 aaKnown RBP3.91□□□□□ -1.78
PTPN22-206ENST00000525799 USB1Q9BQ65 265 aaKnown RBP3.91□□□□□ -1.78
PTPN22-206ENST00000525799 ZBTB24O43167 697 aaPredicted RBP3.9□□□□□ -1.79
PTPN22-206ENST00000525799 SMPD1P17405 629 aa3.9□□□□□ -1.79
PTPN22-206ENST00000525799 GUCA2AQ02747 115 aa3.9□□□□□ -1.79
PTPN22-206ENST00000525799 TRIM32Q13049 653 aa3.89□□□□□ -1.79
PTPN22-206ENST00000525799 KRI1Q8N9T8 703 aaKnown RBP3.89□□□□□ -1.79
PTPN22-206ENST00000525799 REPIN1Q9BWE0 567 aaKnown RBP3.89□□□□□ -1.79
PTPN22-206ENST00000525799 ADAMTS8Q9UP79 889 aa3.89□□□□□ -1.79
PTPN22-206ENST00000525799 VSIG8P0DPA2 414 aa3.88□□□□□ -1.79
PTPN22-206ENST00000525799 BARGINQ6ZT62 677 aa3.88□□□□□ -1.79
PTPN22-206ENST00000525799 NUTM1Q86Y26 1132 aa3.88□□□□□ -1.79
PTPN22-206ENST00000525799 WNT7AO00755 349 aa3.88□□□□□ -1.79
PTPN22-206ENST00000525799 ZMYND10O75800 440 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms