RNA–Protein interactions for RNA: ENST00000525568.1

PITPNM1-205, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 3

Gene PITPNM1, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-205ENST00000525568 CDK12Q9NYV4 1490 aaPredicted RBP27.8■■■□□ 2.04
PITPNM1-205ENST00000525568 CDC42BPGQ6DT37 1551 aa27.8■■■□□ 2.04
PITPNM1-205ENST00000525568 ESCO1Q5FWF5 840 aa27.79■■■□□ 2.04
PITPNM1-205ENST00000525568 QTRT2Q9H974 415 aaKnown RBP27.79■■■□□ 2.04
PITPNM1-205ENST00000525568 ACIN1Q9UKV3 1341 aaKnown RBP27.78■■■□□ 2.04
PITPNM1-205ENST00000525568 UPF1Q92900 1129 aaKnown RBP eCLIP27.78■■■□□ 2.04
PITPNM1-205ENST00000525568 SPATA31E1Q6ZUB1 1445 aa27.77■■■□□ 2.04
PITPNM1-205ENST00000525568 RBM6P78332 1123 aaKnown RBP27.76■■■□□ 2.03
PITPNM1-205ENST00000525568 NPHP3Q7Z494 1330 aa27.75■■■□□ 2.03
PITPNM1-205ENST00000525568 KNDC1Q76NI1 1749 aa27.75■■■□□ 2.03
PITPNM1-205ENST00000525568 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
PITPNM1-205ENST00000525568 NUTM2FA1L443 756 aa27.72■■■□□ 2.03
PITPNM1-205ENST00000525568 TMEM132EQ6IEE7 984 aa27.72■■■□□ 2.03
PITPNM1-205ENST00000525568 WAPLQ7Z5K2 1190 aa27.72■■■□□ 2.03
PITPNM1-205ENST00000525568 TECPR2O15040 1411 aa27.71■■■□□ 2.03
PITPNM1-205ENST00000525568 PIK3C2GO75747 1445 aa27.7■■■□□ 2.03
PITPNM1-205ENST00000525568 COL22A1Q8NFW1 1626 aaPredicted RBP27.7■■■□□ 2.02
PITPNM1-205ENST00000525568 USP21Q9UK80 565 aa27.69■■■□□ 2.02
PITPNM1-205ENST00000525568 ABCC11Q96J66 1382 aa27.69■■■□□ 2.02
PITPNM1-205ENST00000525568 RGS12O14924 1447 aa27.68■■■□□ 2.02
PITPNM1-205ENST00000525568 FOXO3O43524 673 aa27.68■■■□□ 2.02
PITPNM1-205ENST00000525568 YTHDC2Q9H6S0 1430 aaKnown RBP27.67■■■□□ 2.02
PITPNM1-205ENST00000525568 XPCQ01831 940 aaPredicted RBP27.66■■■□□ 2.02
PITPNM1-205ENST00000525568 FMN2Q9NZ56 1722 aa27.65■■■□□ 2.02
PITPNM1-205ENST00000525568 TRPC5Q9UL62 973 aaPredicted RBP27.65■■■□□ 2.02
PITPNM1-205ENST00000525568 PXDNQ92626 1479 aa27.64■■■□□ 2.02
PITPNM1-205ENST00000525568 MARF1Q9Y4F3 1742 aaKnown RBP27.64■■■□□ 2.02
PITPNM1-205ENST00000525568 PLEKHH1Q9ULM0 1364 aa27.64■■■□□ 2.02
PITPNM1-205ENST00000525568 KIF1AQ12756 1690 aa27.63■■■□□ 2.01
PITPNM1-205ENST00000525568 DHX57Q6P158 1386 aaKnown RBP27.61■■■□□ 2.01
PITPNM1-205ENST00000525568 MYOM2P54296 1465 aa27.6■■■□□ 2.01
PITPNM1-205ENST00000525568 FNBP4Q8N3X1 1017 aaPredicted RBP27.59■■■□□ 2.01
PITPNM1-205ENST00000525568 C14orf93Q9H972 538 aaKnown RBP27.59■■■□□ 2.01
PITPNM1-205ENST00000525568 CFAP70Q5T0N1 1121 aa27.57■■■□□ 2
PITPNM1-205ENST00000525568 RGPD8O14715 1765 aaPredicted RBP27.57■■■□□ 2
PITPNM1-205ENST00000525568 RAB3GAP2Q9H2M9 1393 aa27.57■■■□□ 2
PITPNM1-205ENST00000525568 SIRT1Q96EB6 747 aa27.56■■■□□ 2
PITPNM1-205ENST00000525568 ATAD2Q6PL18 1390 aa27.56■■■□□ 2
PITPNM1-205ENST00000525568 ATRNO75882 1429 aa27.54■■■□□ 2
PITPNM1-205ENST00000525568 SAFB2Q14151 953 aaKnown RBP eCLIP27.54■■■□□ 2
PITPNM1-205ENST00000525568 NRXN1Q9ULB1 1477 aa27.54■■■□□ 2
PITPNM1-205ENST00000525568 HAP1P54257 671 aaPredicted RBP27.53■■■□□ 2
PITPNM1-205ENST00000525568 KRT28Q7Z3Y7 464 aa27.53■■■□□ 2
PITPNM1-205ENST00000525568 POGKQ9P215 609 aa27.53■■■□□ 2
PITPNM1-205ENST00000525568 SPATA31A3Q5VYP0 1347 aa27.51■■□□□ 1.99
PITPNM1-205ENST00000525568 PSME1Q06323 249 aa27.51■■□□□ 1.99
PITPNM1-205ENST00000525568 PRAM1Q96QH2 718 aa27.51■■□□□ 1.99
PITPNM1-205ENST00000525568 PHF8Q9UPP1 1060 aa27.5■■□□□ 1.99
PITPNM1-205ENST00000525568 BCL9LQ86UU0 1499 aa27.47■■□□□ 1.99
PITPNM1-205ENST00000525568 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.47■■□□□ 1.99
PITPNM1-205ENST00000525568 PLEKHG5O94827 1062 aa27.46■■□□□ 1.99
PITPNM1-205ENST00000525568 LMOD2Q6P5Q4 547 aa27.46■■□□□ 1.99
PITPNM1-205ENST00000525568 DLC1Q96QB1 1528 aa27.46■■□□□ 1.99
PITPNM1-205ENST00000525568 TNS3Q68CZ2 1445 aa27.45■■□□□ 1.98
PITPNM1-205ENST00000525568 GJD4Q96KN9 370 aaPredicted RBP27.45■■□□□ 1.98
PITPNM1-205ENST00000525568 USP32Q8NFA0 1604 aa27.45■■□□□ 1.98
PITPNM1-205ENST00000525568 KDM2AQ9Y2K7 1162 aa27.44■■□□□ 1.98
PITPNM1-205ENST00000525568 UNC5CLQ8IV45 518 aa27.42■■□□□ 1.98
PITPNM1-205ENST00000525568 DCAF11Q8TEB1 546 aa27.41■■□□□ 1.98
PITPNM1-205ENST00000525568 TRAK1Q9UPV9 953 aa27.41■■□□□ 1.98
PITPNM1-205ENST00000525568 ANKARQ7Z5J8 1434 aa27.4■■□□□ 1.98
PITPNM1-205ENST00000525568 ARHGEF10O15013 1369 aa27.39■■□□□ 1.98
PITPNM1-205ENST00000525568 PMFBP1Q8TBY8 1022 aa27.39■■□□□ 1.98
PITPNM1-205ENST00000525568 ADGRB2O60241 1585 aa27.39■■□□□ 1.97
PITPNM1-205ENST00000525568 SBNO1A3KN83 1393 aa27.38■■□□□ 1.97
PITPNM1-205ENST00000525568 SLIT2O94813 1529 aa27.38■■□□□ 1.97
PITPNM1-205ENST00000525568 EIF3AQ14152 1382 aaKnown RBP27.37■■□□□ 1.97
PITPNM1-205ENST00000525568 ADGRB1O14514 1584 aa27.37■■□□□ 1.97
PITPNM1-205ENST00000525568 CABLES1Q8TDN4 633 aa27.37■■□□□ 1.97
PITPNM1-205ENST00000525568 HIRIP3Q9BW71 556 aaPredicted RBP27.37■■□□□ 1.97
PITPNM1-205ENST00000525568 PLCH1Q4KWH8 1693 aa27.36■■□□□ 1.97
PITPNM1-205ENST00000525568 MINK1Q8N4C8 1332 aaPredicted RBP27.36■■□□□ 1.97
PITPNM1-205ENST00000525568 CCDC9Q9Y3X0 531 aaKnown RBP27.35■■□□□ 1.97
PITPNM1-205ENST00000525568 RALGAPBQ86X10 1494 aa27.35■■□□□ 1.97
PITPNM1-205ENST00000525568 ABCA3Q99758 1704 aa27.35■■□□□ 1.97
PITPNM1-205ENST00000525568 CCDC125Q86Z20 511 aa27.34■■□□□ 1.97
PITPNM1-205ENST00000525568 STAC3Q96MF2 364 aa27.34■■□□□ 1.97
PITPNM1-205ENST00000525568 NWD2Q9ULI1 1742 aa27.33■■□□□ 1.97
PITPNM1-205ENST00000525568 GLI3P10071 1580 aa27.33■■□□□ 1.97
PITPNM1-205ENST00000525568 GPRASP1Q5JY77 1395 aa27.33■■□□□ 1.97
PITPNM1-205ENST00000525568 TULP4Q9NRJ4 1543 aa27.29■■□□□ 1.96
PITPNM1-205ENST00000525568 BRWD3Q6RI45 1802 aa27.29■■□□□ 1.96
PITPNM1-205ENST00000525568 HRCP23327 699 aa27.28■■□□□ 1.96
PITPNM1-205ENST00000525568 ZRANB1Q9UGI0 708 aa27.28■■□□□ 1.96
PITPNM1-205ENST00000525568 WASLO00401 505 aaPredicted RBP27.27■■□□□ 1.96
PITPNM1-205ENST00000525568 VPS72Q15906 364 aa27.27■■□□□ 1.96
PITPNM1-205ENST00000525568 ITSN1Q15811 1721 aa27.27■■□□□ 1.96
PITPNM1-205ENST00000525568 TRPM3Q9HCF6 1732 aaPredicted RBP27.27■■□□□ 1.96
PITPNM1-205ENST00000525568 NGDNQ8NEJ9 315 aaKnown RBP27.26■■□□□ 1.95
PITPNM1-205ENST00000525568 ARHGEF28Q8N1W1 1705 aaKnown RBP27.25■■□□□ 1.95
PITPNM1-205ENST00000525568 A0A0G2JS52 829 aa27.25■■□□□ 1.95
PITPNM1-205ENST00000525568 MYT1Q01538 1121 aa27.25■■□□□ 1.95
PITPNM1-205ENST00000525568 PAK3O75914 559 aaPredicted RBP27.24■■□□□ 1.95
PITPNM1-205ENST00000525568 SEPT12Q8IYM1 358 aa27.24■■□□□ 1.95
PITPNM1-205ENST00000525568 SF3B2Q13435 895 aaKnown RBP27.23■■□□□ 1.95
PITPNM1-205ENST00000525568 ALS2Q96Q42 1657 aa27.23■■□□□ 1.95
PITPNM1-205ENST00000525568 EP400Q96L91 3159 aa27.23■■□□□ 1.95
PITPNM1-205ENST00000525568 PRR36Q9H6K5 1346 aa27.22■■□□□ 1.95
PITPNM1-205ENST00000525568 FAM83GA6ND36 823 aa27.21■■□□□ 1.95
PITPNM1-205ENST00000525568 BLMP54132 1417 aaPredicted RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms