RNA–Protein interactions for RNA: ENST00000525238.2

ABCA7-207, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 1 (best)

Gene ABCA7, Length 1,100 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-207ENST00000525238 WAPLQ7Z5K2 1190 aa28.51■■■□□ 2.15
ABCA7-207ENST00000525238 PNPLA6Q8IY17 1366 aa28.5■■■□□ 2.15
ABCA7-207ENST00000525238 TECPR2O15040 1411 aa28.5■■■□□ 2.15
ABCA7-207ENST00000525238 NUTM2FA1L443 756 aa28.48■■■□□ 2.15
ABCA7-207ENST00000525238 ESCO1Q5FWF5 840 aa28.48■■■□□ 2.15
ABCA7-207ENST00000525238 YTHDC2Q9H6S0 1430 aaKnown RBP28.48■■■□□ 2.15
ABCA7-207ENST00000525238 LAMC1P11047 1609 aa28.47■■■□□ 2.15
ABCA7-207ENST00000525238 ABCC11Q96J66 1382 aa28.47■■■□□ 2.15
ABCA7-207ENST00000525238 MYOM2P54296 1465 aa28.46■■■□□ 2.15
ABCA7-207ENST00000525238 C8orf37Q96NL8 207 aa28.46■■■□□ 2.15
ABCA7-207ENST00000525238 PLEKHH1Q9ULM0 1364 aa28.46■■■□□ 2.15
ABCA7-207ENST00000525238 AFF2P51816 1311 aa28.45■■■□□ 2.15
ABCA7-207ENST00000525238 CFAP70Q5T0N1 1121 aa28.43■■■□□ 2.14
ABCA7-207ENST00000525238 SOS2Q07890 1332 aaPredicted RBP28.43■■■□□ 2.14
ABCA7-207ENST00000525238 DHX57Q6P158 1386 aaKnown RBP28.42■■■□□ 2.14
ABCA7-207ENST00000525238 C14orf93Q9H972 538 aaKnown RBP28.42■■■□□ 2.14
ABCA7-207ENST00000525238 NRXN1Q9ULB1 1477 aa28.41■■■□□ 2.14
ABCA7-207ENST00000525238 ADAMTS2O95450 1211 aa28.41■■■□□ 2.14
ABCA7-207ENST00000525238 NPHP3Q7Z494 1330 aa28.41■■■□□ 2.14
ABCA7-207ENST00000525238 RXRBP28702 533 aa28.39■■■□□ 2.14
ABCA7-207ENST00000525238 FMN2Q9NZ56 1722 aa28.39■■■□□ 2.14
ABCA7-207ENST00000525238 XPCQ01831 940 aaPredicted RBP28.38■■■□□ 2.13
ABCA7-207ENST00000525238 FOXO3O43524 673 aa28.37■■■□□ 2.13
ABCA7-207ENST00000525238 SAFB2Q14151 953 aaKnown RBP eCLIP28.36■■■□□ 2.13
ABCA7-207ENST00000525238 NGLY1Q96IV0 654 aa28.36■■■□□ 2.13
ABCA7-207ENST00000525238 KDM2AQ9Y2K7 1162 aa28.36■■■□□ 2.13
ABCA7-207ENST00000525238 DCAF11Q8TEB1 546 aa28.33■■■□□ 2.13
ABCA7-207ENST00000525238 PXDNQ92626 1479 aa28.33■■■□□ 2.13
ABCA7-207ENST00000525238 KIF1AQ12756 1690 aa28.32■■■□□ 2.12
ABCA7-207ENST00000525238 PRAM1Q96QH2 718 aa28.32■■■□□ 2.12
ABCA7-207ENST00000525238 POGKQ9P215 609 aa28.32■■■□□ 2.12
ABCA7-207ENST00000525238 COL22A1Q8NFW1 1626 aaPredicted RBP28.32■■■□□ 2.12
ABCA7-207ENST00000525238 SIRT1Q96EB6 747 aa28.31■■■□□ 2.12
ABCA7-207ENST00000525238 HRCP23327 699 aa28.3■■■□□ 2.12
ABCA7-207ENST00000525238 RGPD8O14715 1765 aaPredicted RBP28.29■■■□□ 2.12
ABCA7-207ENST00000525238 QTRT2Q9H974 415 aaKnown RBP28.29■■■□□ 2.12
ABCA7-207ENST00000525238 TRAK1Q9UPV9 953 aa28.26■■■□□ 2.11
ABCA7-207ENST00000525238 DLC1Q96QB1 1528 aa28.26■■■□□ 2.11
ABCA7-207ENST00000525238 USP21Q9UK80 565 aa28.25■■■□□ 2.11
ABCA7-207ENST00000525238 CDK12Q9NYV4 1490 aaPredicted RBP28.25■■■□□ 2.11
ABCA7-207ENST00000525238 ADGRB1O14514 1584 aa28.24■■■□□ 2.11
ABCA7-207ENST00000525238 RBM6P78332 1123 aaKnown RBP28.24■■■□□ 2.11
ABCA7-207ENST00000525238 PHF8Q9UPP1 1060 aa28.22■■■□□ 2.11
ABCA7-207ENST00000525238 MARF1Q9Y4F3 1742 aaKnown RBP28.22■■■□□ 2.11
ABCA7-207ENST00000525238 KRT28Q7Z3Y7 464 aa28.21■■■□□ 2.11
ABCA7-207ENST00000525238 HIRIP3Q9BW71 556 aaPredicted RBP28.2■■■□□ 2.1
ABCA7-207ENST00000525238 RGS12O14924 1447 aa28.19■■■□□ 2.1
ABCA7-207ENST00000525238 MINK1Q8N4C8 1332 aaPredicted RBP28.18■■■□□ 2.1
ABCA7-207ENST00000525238 PLEKHG5O94827 1062 aa28.18■■■□□ 2.1
ABCA7-207ENST00000525238 STAC3Q96MF2 364 aa28.18■■■□□ 2.1
ABCA7-207ENST00000525238 TRPC5Q9UL62 973 aaPredicted RBP28.18■■■□□ 2.1
ABCA7-207ENST00000525238 SPATA31A3Q5VYP0 1347 aa28.18■■■□□ 2.1
ABCA7-207ENST00000525238 ADGRB2O60241 1585 aa28.17■■■□□ 2.1
ABCA7-207ENST00000525238 HAP1P54257 671 aaPredicted RBP28.17■■■□□ 2.1
ABCA7-207ENST00000525238 PSME1Q06323 249 aa28.16■■■□□ 2.1
ABCA7-207ENST00000525238 LMOD2Q6P5Q4 547 aa28.16■■■□□ 2.1
ABCA7-207ENST00000525238 UPF1Q92900 1129 aaKnown RBP eCLIP28.16■■■□□ 2.1
ABCA7-207ENST00000525238 PMFBP1Q8TBY8 1022 aa28.15■■■□□ 2.1
ABCA7-207ENST00000525238 USP32Q8NFA0 1604 aa28.14■■■□□ 2.1
ABCA7-207ENST00000525238 FNBP4Q8N3X1 1017 aaPredicted RBP28.14■■■□□ 2.1
ABCA7-207ENST00000525238 TNS3Q68CZ2 1445 aa28.14■■■□□ 2.1
ABCA7-207ENST00000525238 ANKARQ7Z5J8 1434 aa28.14■■■□□ 2.1
ABCA7-207ENST00000525238 ARHGEF28Q8N1W1 1705 aaKnown RBP28.12■■■□□ 2.09
ABCA7-207ENST00000525238 EIF3AQ14152 1382 aaKnown RBP28.11■■■□□ 2.09
ABCA7-207ENST00000525238 ATRNO75882 1429 aa28.09■■■□□ 2.09
ABCA7-207ENST00000525238 TULP4Q9NRJ4 1543 aa28.08■■■□□ 2.09
ABCA7-207ENST00000525238 WASLO00401 505 aaPredicted RBP28.06■■■□□ 2.08
ABCA7-207ENST00000525238 CABLES1Q8TDN4 633 aa28.06■■■□□ 2.08
ABCA7-207ENST00000525238 SBNO1A3KN83 1393 aa28.06■■■□□ 2.08
ABCA7-207ENST00000525238 BCL9LQ86UU0 1499 aa28.06■■■□□ 2.08
ABCA7-207ENST00000525238 ARHGEF10O15013 1369 aa28.05■■■□□ 2.08
ABCA7-207ENST00000525238 GPRASP1Q5JY77 1395 aa28.04■■■□□ 2.08
ABCA7-207ENST00000525238 ABCA3Q99758 1704 aa28.04■■■□□ 2.08
ABCA7-207ENST00000525238 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.04■■■□□ 2.08
ABCA7-207ENST00000525238 PRR36Q9H6K5 1346 aa28.03■■■□□ 2.08
ABCA7-207ENST00000525238 KIAA1210Q9ULL0 1709 aa28.02■■■□□ 2.08
ABCA7-207ENST00000525238 ITSN1Q15811 1721 aa28.01■■■□□ 2.07
ABCA7-207ENST00000525238 NGDNQ8NEJ9 315 aaKnown RBP28.01■■■□□ 2.07
ABCA7-207ENST00000525238 ATAD2Q6PL18 1390 aa28■■■□□ 2.07
ABCA7-207ENST00000525238 SLIT2O94813 1529 aa27.99■■■□□ 2.07
ABCA7-207ENST00000525238 TRPM3Q9HCF6 1732 aaPredicted RBP27.99■■■□□ 2.07
ABCA7-207ENST00000525238 UNC5CLQ8IV45 518 aa27.99■■■□□ 2.07
ABCA7-207ENST00000525238 GJD4Q96KN9 370 aaPredicted RBP27.99■■■□□ 2.07
ABCA7-207ENST00000525238 PLCH1Q4KWH8 1693 aa27.98■■■□□ 2.07
ABCA7-207ENST00000525238 PAK3O75914 559 aaPredicted RBP27.97■■■□□ 2.07
ABCA7-207ENST00000525238 CCDC9Q9Y3X0 531 aaKnown RBP27.95■■■□□ 2.06
ABCA7-207ENST00000525238 ALS2Q96Q42 1657 aa27.94■■■□□ 2.06
ABCA7-207ENST00000525238 NUDT16Q96DE0 195 aaKnown RBP27.94■■■□□ 2.06
ABCA7-207ENST00000525238 ATP7BP35670 1465 aa27.94■■■□□ 2.06
ABCA7-207ENST00000525238 NBPF1Q3BBV0 1214 aa27.93■■■□□ 2.06
ABCA7-207ENST00000525238 RALGAPBQ86X10 1494 aa27.93■■■□□ 2.06
ABCA7-207ENST00000525238 NWD2Q9ULI1 1742 aa27.92■■■□□ 2.06
ABCA7-207ENST00000525238 GLI3P10071 1580 aa27.92■■■□□ 2.06
ABCA7-207ENST00000525238 CDK19Q9BWU1 502 aa27.92■■■□□ 2.06
ABCA7-207ENST00000525238 NEUROD1Q13562 356 aa27.87■■■□□ 2.05
ABCA7-207ENST00000525238 TOPAZ1Q8N9V7 1692 aa27.87■■■□□ 2.05
ABCA7-207ENST00000525238 FAM83GA6ND36 823 aa27.86■■■□□ 2.05
ABCA7-207ENST00000525238 L3MBTL2Q969R5 705 aa27.86■■■□□ 2.05
ABCA7-207ENST00000525238 SIN3AQ96ST3 1273 aa27.86■■■□□ 2.05
ABCA7-207ENST00000525238 VPS72Q15906 364 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms