RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 FDX1P10109 184 aa12.74□□□□□ -0.37
COPB1-203ENST00000525214 USB1Q9BQ65 265 aaKnown RBP12.74□□□□□ -0.37
COPB1-203ENST00000525214 LIAT1Q6ZQX7 453 aa12.73□□□□□ -0.37
COPB1-203ENST00000525214 SLC19A1P41440 591 aa12.72□□□□□ -0.37
COPB1-203ENST00000525214 IRX2Q9BZI1 471 aaPredicted RBP12.72□□□□□ -0.37
COPB1-203ENST00000525214 FCF1Q9Y324 198 aaKnown RBP12.72□□□□□ -0.37
COPB1-203ENST00000525214 MMP16P51512 607 aa12.71□□□□□ -0.37
COPB1-203ENST00000525214 GPBP1L1Q9HC44 474 aaPredicted RBP12.7□□□□□ -0.38
COPB1-203ENST00000525214 DXOO77932 396 aaKnown RBP12.68□□□□□ -0.38
COPB1-203ENST00000525214 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
COPB1-203ENST00000525214 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
COPB1-203ENST00000525214 SPRYD7Q5W111 196 aa12.67□□□□□ -0.38
COPB1-203ENST00000525214 RETREG3Q86VR2 466 aa12.67□□□□□ -0.38
COPB1-203ENST00000525214 SPTLC1O15269 473 aa12.66□□□□□ -0.38
COPB1-203ENST00000525214 GJA5P36382 358 aa12.66□□□□□ -0.38
COPB1-203ENST00000525214 C6orf229H3BNL8 230 aa12.65□□□□□ -0.38
COPB1-203ENST00000525214 MYSM1Q5VVJ2 828 aa12.65□□□□□ -0.38
COPB1-203ENST00000525214 KDM4CQ9H3R0 1056 aa12.65□□□□□ -0.38
COPB1-203ENST00000525214 PCDHB15Q9Y5E8 787 aa12.65□□□□□ -0.38
COPB1-203ENST00000525214 TRIM67Q6ZTA4 783 aa12.63□□□□□ -0.39
COPB1-203ENST00000525214 JUNDP17535 347 aa12.62□□□□□ -0.39
COPB1-203ENST00000525214 RIC3Q7Z5B4 369 aa12.62□□□□□ -0.39
COPB1-203ENST00000525214 ZNF598Q86UK7 904 aaKnown RBP12.62□□□□□ -0.39
COPB1-203ENST00000525214 LIMD1Q9UGP4 676 aa12.62□□□□□ -0.39
COPB1-203ENST00000525214 TPRNQ4KMQ1 711 aa12.61□□□□□ -0.39
COPB1-203ENST00000525214 RPIAP49247 311 aa12.6□□□□□ -0.39
COPB1-203ENST00000525214 MTMR2Q13614 643 aa12.6□□□□□ -0.39
COPB1-203ENST00000525214 ZNF697Q5TEC3 545 aa12.6□□□□□ -0.39
COPB1-203ENST00000525214 FAM117AQ9C073 453 aa12.6□□□□□ -0.39
COPB1-203ENST00000525214 GFRA3O60609 400 aa12.59□□□□□ -0.39
COPB1-203ENST00000525214 HRCP23327 699 aa12.58□□□□□ -0.4
COPB1-203ENST00000525214 PRR7Q8TB68 274 aa12.58□□□□□ -0.4
COPB1-203ENST00000525214 CABLES1Q8TDN4 633 aa12.57□□□□□ -0.4
COPB1-203ENST00000525214 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
COPB1-203ENST00000525214 SPDYE5A6NIY4 337 aa12.56□□□□□ -0.4
COPB1-203ENST00000525214 CSPP1Q1MSJ5 1256 aa12.56□□□□□ -0.4
COPB1-203ENST00000525214 PLEKHG3A1L390 1219 aa12.55□□□□□ -0.4
COPB1-203ENST00000525214 QPCTQ16769 361 aa12.55□□□□□ -0.4
COPB1-203ENST00000525214 TUSC1Q2TAM9 212 aa12.55□□□□□ -0.4
COPB1-203ENST00000525214 PRPF38BQ5VTL8 546 aaKnown RBP12.55□□□□□ -0.4
COPB1-203ENST00000525214 ZBTB3Q9H5J0 574 aa12.55□□□□□ -0.4
COPB1-203ENST00000525214 CFAP99D6REC4 459 aa12.54□□□□□ -0.4
COPB1-203ENST00000525214 NRG2O14511 850 aaPredicted RBP12.54□□□□□ -0.4
COPB1-203ENST00000525214 GDF9O60383 454 aa12.54□□□□□ -0.4
COPB1-203ENST00000525214 LAPTM4AQ15012 233 aa12.54□□□□□ -0.4
COPB1-203ENST00000525214 CCDC24Q8N4L8 307 aa12.54□□□□□ -0.4
COPB1-203ENST00000525214 NUDT12Q9BQG2 462 aa12.54□□□□□ -0.4
COPB1-203ENST00000525214 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
COPB1-203ENST00000525214 RSPH6AQ9H0K4 717 aa12.53□□□□□ -0.4
COPB1-203ENST00000525214 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
COPB1-203ENST00000525214 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
COPB1-203ENST00000525214 ZBTB24O43167 697 aaPredicted RBP12.52□□□□□ -0.41
COPB1-203ENST00000525214 LILRB3O75022 631 aa12.52□□□□□ -0.41
COPB1-203ENST00000525214 PRR20EP86478 221 aa12.52□□□□□ -0.41
COPB1-203ENST00000525214 PRR20CP86479 221 aa12.52□□□□□ -0.41
COPB1-203ENST00000525214 PRR20DP86480 221 aa12.52□□□□□ -0.41
COPB1-203ENST00000525214 PRR20BP86481 221 aa12.52□□□□□ -0.41
COPB1-203ENST00000525214 PRR20AP86496 221 aa12.52□□□□□ -0.41
COPB1-203ENST00000525214 TRIM32Q13049 653 aa12.52□□□□□ -0.41
COPB1-203ENST00000525214 DESI1Q6ICB0 168 aa12.52□□□□□ -0.41
COPB1-203ENST00000525214 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
COPB1-203ENST00000525214 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
COPB1-203ENST00000525214 PTCRAQ6ISU1 281 aaPredicted RBP12.51□□□□□ -0.41
COPB1-203ENST00000525214 TNFRSF10AO00220 468 aa12.5□□□□□ -0.41
COPB1-203ENST00000525214 LCE2BO14633 110 aa12.5□□□□□ -0.41
COPB1-203ENST00000525214 PTPRNQ16849 979 aa12.5□□□□□ -0.41
COPB1-203ENST00000525214 Q6ZNB5 142 aa12.5□□□□□ -0.41
COPB1-203ENST00000525214 CCNYL3P0C7X3 344 aa12.49□□□□□ -0.41
COPB1-203ENST00000525214 BRPF1P55201 1214 aaPredicted RBP12.49□□□□□ -0.41
COPB1-203ENST00000525214 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
COPB1-203ENST00000525214 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
COPB1-203ENST00000525214 FOXC1Q12948 553 aa12.47□□□□□ -0.41
COPB1-203ENST00000525214 SKIV2LQ15477 1246 aaKnown RBP12.47□□□□□ -0.41
COPB1-203ENST00000525214 RTL5Q5HYW3 569 aaPredicted RBP12.47□□□□□ -0.41
COPB1-203ENST00000525214 FBXO31Q5XUX0 539 aaPredicted RBP12.46□□□□□ -0.41
COPB1-203ENST00000525214 LYPD8Q6UX82 237 aa12.46□□□□□ -0.41
COPB1-203ENST00000525214 EVA1BQ9NVM1 165 aa12.46□□□□□ -0.41
COPB1-203ENST00000525214 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
COPB1-203ENST00000525214 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
COPB1-203ENST00000525214 SKOR1P84550 965 aa12.45□□□□□ -0.42
COPB1-203ENST00000525214 NUTM2DQ5VT03 806 aaPredicted RBP12.45□□□□□ -0.42
COPB1-203ENST00000525214 NUTM2AQ8IVF1 878 aaPredicted RBP12.45□□□□□ -0.42
COPB1-203ENST00000525214 PROCA1Q8NCQ7 364 aaPredicted RBP12.45□□□□□ -0.42
COPB1-203ENST00000525214 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
COPB1-203ENST00000525214 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.43□□□□□ -0.42
COPB1-203ENST00000525214 PRKCSHP14314 528 aaPredicted RBP12.42□□□□□ -0.42
COPB1-203ENST00000525214 KCNH2Q12809 1159 aa12.42□□□□□ -0.42
COPB1-203ENST00000525214 WNT7AO00755 349 aa12.41□□□□□ -0.42
COPB1-203ENST00000525214 UNC93B1Q9H1C4 597 aa12.41□□□□□ -0.42
COPB1-203ENST00000525214 F12P00748 615 aaPredicted RBP12.4□□□□□ -0.42
COPB1-203ENST00000525214 TOR4AQ9NXH8 423 aa12.4□□□□□ -0.42
COPB1-203ENST00000525214 WNT7BP56706 349 aa12.39□□□□□ -0.43
COPB1-203ENST00000525214 TSC1Q92574 1164 aa12.39□□□□□ -0.43
COPB1-203ENST00000525214 MAP10Q9P2G4 905 aa12.39□□□□□ -0.43
COPB1-203ENST00000525214 IL27Q8NEV9 243 aa12.38□□□□□ -0.43
COPB1-203ENST00000525214 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
COPB1-203ENST00000525214 TRAF7Q6Q0C0 670 aa12.37□□□□□ -0.43
COPB1-203ENST00000525214 MRGPRX2Q96LB1 330 aa12.37□□□□□ -0.43
COPB1-203ENST00000525214 FAM187AA6NFU0 413 aa12.36□□□□□ -0.43
COPB1-203ENST00000525214 PPP2R2DQ66LE6 453 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms