RNA–Protein interactions for RNA: ENST00000524998.1

RECQL4-202, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-202ENST00000524998 NGLY1Q96IV0 654 aa29.2■■■□□ 2.26
RECQL4-202ENST00000524998 LRPPRCP42704 1394 aaKnown RBP29.19■■■□□ 2.26
RECQL4-202ENST00000524998 TMEM132EQ6IEE7 984 aa29.19■■■□□ 2.26
RECQL4-202ENST00000524998 WAPLQ7Z5K2 1190 aa29.18■■■□□ 2.26
RECQL4-202ENST00000524998 NPHP3Q7Z494 1330 aa29.18■■■□□ 2.26
RECQL4-202ENST00000524998 QTRT2Q9H974 415 aaKnown RBP29.17■■■□□ 2.26
RECQL4-202ENST00000524998 ABCC11Q96J66 1382 aa29.15■■■□□ 2.26
RECQL4-202ENST00000524998 CDC42BPGQ6DT37 1551 aa29.15■■■□□ 2.26
RECQL4-202ENST00000524998 LAMC1P11047 1609 aa29.15■■■□□ 2.26
RECQL4-202ENST00000524998 TECPR2O15040 1411 aa29.14■■■□□ 2.26
RECQL4-202ENST00000524998 PIK3C2GO75747 1445 aa29.14■■■□□ 2.26
RECQL4-202ENST00000524998 NUTM2FA1L443 756 aa29.14■■■□□ 2.26
RECQL4-202ENST00000524998 CDK12Q9NYV4 1490 aaPredicted RBP29.12■■■□□ 2.25
RECQL4-202ENST00000524998 FOXO3O43524 673 aa29.12■■■□□ 2.25
RECQL4-202ENST00000524998 RBM6P78332 1123 aaKnown RBP29.12■■■□□ 2.25
RECQL4-202ENST00000524998 IFT172Q9UG01 1749 aa29.11■■■□□ 2.25
RECQL4-202ENST00000524998 UPF1Q92900 1129 aaKnown RBP eCLIP29.11■■■□□ 2.25
RECQL4-202ENST00000524998 YTHDC2Q9H6S0 1430 aaKnown RBP29.1■■■□□ 2.25
RECQL4-202ENST00000524998 XPCQ01831 940 aaPredicted RBP29.08■■■□□ 2.25
RECQL4-202ENST00000524998 C14orf93Q9H972 538 aaKnown RBP29.08■■■□□ 2.25
RECQL4-202ENST00000524998 RAB3GAP2Q9H2M9 1393 aa29.08■■■□□ 2.25
RECQL4-202ENST00000524998 USP21Q9UK80 565 aa29.07■■■□□ 2.24
RECQL4-202ENST00000524998 PLEKHH1Q9ULM0 1364 aa29.07■■■□□ 2.24
RECQL4-202ENST00000524998 DHX57Q6P158 1386 aaKnown RBP29.06■■■□□ 2.24
RECQL4-202ENST00000524998 SIRT1Q96EB6 747 aa29.05■■■□□ 2.24
RECQL4-202ENST00000524998 CFAP70Q5T0N1 1121 aa29.04■■■□□ 2.24
RECQL4-202ENST00000524998 KNDC1Q76NI1 1749 aa29.03■■■□□ 2.24
RECQL4-202ENST00000524998 TRPC5Q9UL62 973 aaPredicted RBP29.03■■■□□ 2.24
RECQL4-202ENST00000524998 MYOM2P54296 1465 aa29.01■■■□□ 2.23
RECQL4-202ENST00000524998 PXDNQ92626 1479 aa29.01■■■□□ 2.23
RECQL4-202ENST00000524998 RGS12O14924 1447 aa29■■■□□ 2.23
RECQL4-202ENST00000524998 FNBP4Q8N3X1 1017 aaPredicted RBP28.99■■■□□ 2.23
RECQL4-202ENST00000524998 POGKQ9P215 609 aa28.99■■■□□ 2.23
RECQL4-202ENST00000524998 COL22A1Q8NFW1 1626 aaPredicted RBP28.98■■■□□ 2.23
RECQL4-202ENST00000524998 SAFB2Q14151 953 aaKnown RBP eCLIP28.98■■■□□ 2.23
RECQL4-202ENST00000524998 NRXN1Q9ULB1 1477 aa28.97■■■□□ 2.23
RECQL4-202ENST00000524998 PRAM1Q96QH2 718 aa28.97■■■□□ 2.23
RECQL4-202ENST00000524998 FMN2Q9NZ56 1722 aa28.94■■■□□ 2.22
RECQL4-202ENST00000524998 KRT28Q7Z3Y7 464 aa28.94■■■□□ 2.22
RECQL4-202ENST00000524998 PHF8Q9UPP1 1060 aa28.94■■■□□ 2.22
RECQL4-202ENST00000524998 PSME1Q06323 249 aa28.93■■■□□ 2.22
RECQL4-202ENST00000524998 HAP1P54257 671 aaPredicted RBP28.92■■■□□ 2.22
RECQL4-202ENST00000524998 KDM2AQ9Y2K7 1162 aa28.92■■■□□ 2.22
RECQL4-202ENST00000524998 KIF1AQ12756 1690 aa28.92■■■□□ 2.22
RECQL4-202ENST00000524998 SPATA31A3Q5VYP0 1347 aa28.92■■■□□ 2.22
RECQL4-202ENST00000524998 DCAF11Q8TEB1 546 aa28.9■■■□□ 2.22
RECQL4-202ENST00000524998 ATAD2Q6PL18 1390 aa28.88■■■□□ 2.21
RECQL4-202ENST00000524998 ATRNO75882 1429 aa28.88■■■□□ 2.21
RECQL4-202ENST00000524998 TRAK1Q9UPV9 953 aa28.88■■■□□ 2.21
RECQL4-202ENST00000524998 LMOD2Q6P5Q4 547 aa28.87■■■□□ 2.21
RECQL4-202ENST00000524998 HRCP23327 699 aa28.85■■■□□ 2.21
RECQL4-202ENST00000524998 STAC3Q96MF2 364 aa28.85■■■□□ 2.21
RECQL4-202ENST00000524998 DLC1Q96QB1 1528 aa28.84■■■□□ 2.21
RECQL4-202ENST00000524998 PLEKHG5O94827 1062 aa28.84■■■□□ 2.21
RECQL4-202ENST00000524998 BCL9LQ86UU0 1499 aa28.84■■■□□ 2.21
RECQL4-202ENST00000524998 GJD4Q96KN9 370 aaPredicted RBP28.82■■■□□ 2.2
RECQL4-202ENST00000524998 HIRIP3Q9BW71 556 aaPredicted RBP28.82■■■□□ 2.2
RECQL4-202ENST00000524998 TNS3Q68CZ2 1445 aa28.82■■■□□ 2.2
RECQL4-202ENST00000524998 MARF1Q9Y4F3 1742 aaKnown RBP28.81■■■□□ 2.2
RECQL4-202ENST00000524998 UNC5CLQ8IV45 518 aa28.81■■■□□ 2.2
RECQL4-202ENST00000524998 PMFBP1Q8TBY8 1022 aa28.81■■■□□ 2.2
RECQL4-202ENST00000524998 ANKARQ7Z5J8 1434 aa28.8■■■□□ 2.2
RECQL4-202ENST00000524998 MINK1Q8N4C8 1332 aaPredicted RBP28.8■■■□□ 2.2
RECQL4-202ENST00000524998 EIF3AQ14152 1382 aaKnown RBP28.79■■■□□ 2.2
RECQL4-202ENST00000524998 RGPD8O14715 1765 aaPredicted RBP28.78■■■□□ 2.2
RECQL4-202ENST00000524998 SBNO1A3KN83 1393 aa28.78■■■□□ 2.2
RECQL4-202ENST00000524998 ARHGEF10O15013 1369 aa28.78■■■□□ 2.2
RECQL4-202ENST00000524998 CABLES1Q8TDN4 633 aa28.78■■■□□ 2.2
RECQL4-202ENST00000524998 ADGRB1O14514 1584 aa28.78■■■□□ 2.2
RECQL4-202ENST00000524998 GPRASP1Q5JY77 1395 aa28.75■■■□□ 2.19
RECQL4-202ENST00000524998 USP32Q8NFA0 1604 aa28.73■■■□□ 2.19
RECQL4-202ENST00000524998 ADGRB2O60241 1585 aa28.72■■■□□ 2.19
RECQL4-202ENST00000524998 WASLO00401 505 aaPredicted RBP28.72■■■□□ 2.19
RECQL4-202ENST00000524998 CCDC9Q9Y3X0 531 aaKnown RBP28.72■■■□□ 2.19
RECQL4-202ENST00000524998 SLIT2O94813 1529 aa28.72■■■□□ 2.19
RECQL4-202ENST00000524998 CCDC125Q86Z20 511 aa28.69■■■□□ 2.18
RECQL4-202ENST00000524998 NGDNQ8NEJ9 315 aaKnown RBP28.69■■■□□ 2.18
RECQL4-202ENST00000524998 RALGAPBQ86X10 1494 aa28.69■■■□□ 2.18
RECQL4-202ENST00000524998 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.68■■■□□ 2.18
RECQL4-202ENST00000524998 EP400Q96L91 3159 aa28.67■■■□□ 2.18
RECQL4-202ENST00000524998 TULP4Q9NRJ4 1543 aa28.66■■■□□ 2.18
RECQL4-202ENST00000524998 PAK3O75914 559 aaPredicted RBP28.65■■■□□ 2.18
RECQL4-202ENST00000524998 VPS72Q15906 364 aa28.65■■■□□ 2.18
RECQL4-202ENST00000524998 PRR36Q9H6K5 1346 aa28.65■■■□□ 2.18
RECQL4-202ENST00000524998 FAM83GA6ND36 823 aa28.62■■■□□ 2.17
RECQL4-202ENST00000524998 SEPT12Q8IYM1 358 aa28.61■■■□□ 2.17
RECQL4-202ENST00000524998 GLI3P10071 1580 aa28.61■■■□□ 2.17
RECQL4-202ENST00000524998 A0A0G2JS52 829 aa28.6■■■□□ 2.17
RECQL4-202ENST00000524998 MYT1Q01538 1121 aa28.6■■■□□ 2.17
RECQL4-202ENST00000524998 ZRANB1Q9UGI0 708 aa28.6■■■□□ 2.17
RECQL4-202ENST00000524998 NUDT16Q96DE0 195 aaKnown RBP28.59■■■□□ 2.17
RECQL4-202ENST00000524998 BTG4Q9NY30 223 aa28.57■■■□□ 2.16
RECQL4-202ENST00000524998 PLCH1Q4KWH8 1693 aa28.57■■■□□ 2.16
RECQL4-202ENST00000524998 NWD2Q9ULI1 1742 aa28.57■■■□□ 2.16
RECQL4-202ENST00000524998 SF3B2Q13435 895 aaKnown RBP28.56■■■□□ 2.16
RECQL4-202ENST00000524998 ABCA3Q99758 1704 aa28.56■■■□□ 2.16
RECQL4-202ENST00000524998 CDK19Q9BWU1 502 aa28.56■■■□□ 2.16
RECQL4-202ENST00000524998 ARHGEF28Q8N1W1 1705 aaKnown RBP28.55■■■□□ 2.16
RECQL4-202ENST00000524998 TRPM3Q9HCF6 1732 aaPredicted RBP28.55■■■□□ 2.16
RECQL4-202ENST00000524998 ONECUT3O60422 494 aaPredicted RBP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms