RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 ROBO2Q9HCK4 1378 aa9.7□□□□□ -0.86
NUP98-213ENST00000524563 PLCH1Q4KWH8 1693 aa9.7□□□□□ -0.86
NUP98-213ENST00000524563 VGFO15240 615 aaPredicted RBP9.69□□□□□ -0.86
NUP98-213ENST00000524563 UPF1Q92900 1129 aaKnown RBP eCLIP9.69□□□□□ -0.86
NUP98-213ENST00000524563 PCGF6Q9BYE7 350 aa9.69□□□□□ -0.86
NUP98-213ENST00000524563 BRWD3Q6RI45 1802 aa9.68□□□□□ -0.86
NUP98-213ENST00000524563 NGLY1Q96IV0 654 aa9.68□□□□□ -0.86
NUP98-213ENST00000524563 USP32Q8NFA0 1604 aa9.67□□□□□ -0.86
NUP98-213ENST00000524563 PRAG1Q86YV5 1406 aa9.67□□□□□ -0.86
NUP98-213ENST00000524563 ATAD2Q6PL18 1390 aa9.67□□□□□ -0.86
NUP98-213ENST00000524563 RBM6P78332 1123 aaKnown RBP9.67□□□□□ -0.86
NUP98-213ENST00000524563 RPGRIP1LQ68CZ1 1315 aa9.66□□□□□ -0.86
NUP98-213ENST00000524563 NPHP3Q7Z494 1330 aa9.66□□□□□ -0.86
NUP98-213ENST00000524563 TRIM26Q12899 539 aaPredicted RBP9.66□□□□□ -0.86
NUP98-213ENST00000524563 ITSN1Q15811 1721 aa9.65□□□□□ -0.86
NUP98-213ENST00000524563 NWD2Q9ULI1 1742 aa9.65□□□□□ -0.86
NUP98-213ENST00000524563 QTRT2Q9H974 415 aaKnown RBP9.65□□□□□ -0.86
NUP98-213ENST00000524563 USP21Q9UK80 565 aa9.65□□□□□ -0.86
NUP98-213ENST00000524563 PXDNQ92626 1479 aa9.65□□□□□ -0.87
NUP98-213ENST00000524563 LRPPRCP42704 1394 aaKnown RBP9.64□□□□□ -0.87
NUP98-213ENST00000524563 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
NUP98-213ENST00000524563 FOXD1Q16676 465 aa9.64□□□□□ -0.87
NUP98-213ENST00000524563 ESCO1Q5FWF5 840 aa9.64□□□□□ -0.87
NUP98-213ENST00000524563 ORAI2Q96SN7 254 aa9.64□□□□□ -0.87
NUP98-213ENST00000524563 MPHOSPH9Q99550 1183 aa9.64□□□□□ -0.87
NUP98-213ENST00000524563 STK26Q9P289 416 aa9.64□□□□□ -0.87
NUP98-213ENST00000524563 MYOM2P54296 1465 aa9.64□□□□□ -0.87
NUP98-213ENST00000524563 NUTM2FA1L443 756 aa9.63□□□□□ -0.87
NUP98-213ENST00000524563 XPCQ01831 940 aaPredicted RBP9.63□□□□□ -0.87
NUP98-213ENST00000524563 TRPC5Q9UL62 973 aaPredicted RBP9.63□□□□□ -0.87
NUP98-213ENST00000524563 ATRNO75882 1429 aa9.63□□□□□ -0.87
NUP98-213ENST00000524563 ANKRD30BQ9BXX2 1392 aa9.63□□□□□ -0.87
NUP98-213ENST00000524563 SOS2Q07890 1332 aaPredicted RBP9.62□□□□□ -0.87
NUP98-213ENST00000524563 ACIN1Q9UKV3 1341 aaKnown RBP9.62□□□□□ -0.87
NUP98-213ENST00000524563 RGL3Q3MIN7 710 aa9.62□□□□□ -0.87
NUP98-213ENST00000524563 TECPR2O15040 1411 aa9.62□□□□□ -0.87
NUP98-213ENST00000524563 PIK3C2GO75747 1445 aa9.62□□□□□ -0.87
NUP98-213ENST00000524563 PLEKHG5O94827 1062 aa9.61□□□□□ -0.87
NUP98-213ENST00000524563 TNS3Q68CZ2 1445 aa9.6□□□□□ -0.87
NUP98-213ENST00000524563 SPATA31E1Q6ZUB1 1445 aa9.6□□□□□ -0.87
NUP98-213ENST00000524563 YTHDC2Q9H6S0 1430 aaKnown RBP9.6□□□□□ -0.87
NUP98-213ENST00000524563 NRAPQ86VF7 1730 aa9.59□□□□□ -0.87
NUP98-213ENST00000524563 ADGRF5Q8IZF2 1346 aa9.59□□□□□ -0.87
NUP98-213ENST00000524563 ADGRB2O60241 1585 aa9.59□□□□□ -0.87
NUP98-213ENST00000524563 GLI3P10071 1580 aa9.59□□□□□ -0.87
NUP98-213ENST00000524563 A0A0G2JS52 829 aa9.59□□□□□ -0.87
NUP98-213ENST00000524563 MYT1Q01538 1121 aa9.59□□□□□ -0.87
NUP98-213ENST00000524563 RGPD1P0DJD0 1748 aa9.59□□□□□ -0.87
NUP98-213ENST00000524563 ARHGEF28Q8N1W1 1705 aaKnown RBP9.59□□□□□ -0.87
NUP98-213ENST00000524563 FOXO3O43524 673 aa9.58□□□□□ -0.88
NUP98-213ENST00000524563 LMOD2Q6P5Q4 547 aa9.58□□□□□ -0.88
NUP98-213ENST00000524563 CCDC9Q9Y3X0 531 aaKnown RBP9.58□□□□□ -0.88
NUP98-213ENST00000524563 TRPM3Q9HCF6 1732 aaPredicted RBP9.58□□□□□ -0.88
NUP98-213ENST00000524563 PLEKHH1Q9ULM0 1364 aa9.58□□□□□ -0.88
NUP98-213ENST00000524563 WAPLQ7Z5K2 1190 aa9.57□□□□□ -0.88
NUP98-213ENST00000524563 RALGAPBQ86X10 1494 aa9.57□□□□□ -0.88
NUP98-213ENST00000524563 ALS2Q96Q42 1657 aa9.57□□□□□ -0.88
NUP98-213ENST00000524563 COL14A1Q05707 1796 aaKnown RBP9.57□□□□□ -0.88
NUP98-213ENST00000524563 EP400Q96L91 3159 aa9.57□□□□□ -0.88
NUP98-213ENST00000524563 SAFB2Q14151 953 aaKnown RBP eCLIP9.56□□□□□ -0.88
NUP98-213ENST00000524563 TMEM132EQ6IEE7 984 aa9.56□□□□□ -0.88
NUP98-213ENST00000524563 ZRANB1Q9UGI0 708 aa9.56□□□□□ -0.88
NUP98-213ENST00000524563 CRYBG1Q9Y4K1 1723 aa9.56□□□□□ -0.88
NUP98-213ENST00000524563 DLC1Q96QB1 1528 aa9.56□□□□□ -0.88
NUP98-213ENST00000524563 BCL9LQ86UU0 1499 aa9.55□□□□□ -0.88
NUP98-213ENST00000524563 NRXN1Q9ULB1 1477 aa9.55□□□□□ -0.88
NUP98-213ENST00000524563 EIF3AQ14152 1382 aaKnown RBP9.55□□□□□ -0.88
NUP98-213ENST00000524563 DHX57Q6P158 1386 aaKnown RBP9.55□□□□□ -0.88
NUP98-213ENST00000524563 ABCC11Q96J66 1382 aa9.55□□□□□ -0.88
NUP98-213ENST00000524563 SF3B2Q13435 895 aaKnown RBP9.55□□□□□ -0.88
NUP98-213ENST00000524563 PHRF1Q9P1Y6 1649 aaKnown RBP9.55□□□□□ -0.88
NUP98-213ENST00000524563 ARHGEF10O15013 1369 aa9.54□□□□□ -0.88
NUP98-213ENST00000524563 FNBP4Q8N3X1 1017 aaPredicted RBP9.54□□□□□ -0.88
NUP98-213ENST00000524563 POGKQ9P215 609 aa9.54□□□□□ -0.88
NUP98-213ENST00000524563 SLIT2O94813 1529 aa9.54□□□□□ -0.88
NUP98-213ENST00000524563 SPATA31A3Q5VYP0 1347 aa9.54□□□□□ -0.88
NUP98-213ENST00000524563 TULP4Q9NRJ4 1543 aa9.53□□□□□ -0.88
NUP98-213ENST00000524563 PSME1Q06323 249 aa9.53□□□□□ -0.88
NUP98-213ENST00000524563 KRT28Q7Z3Y7 464 aa9.53□□□□□ -0.88
NUP98-213ENST00000524563 PHF8Q9UPP1 1060 aa9.53□□□□□ -0.88
NUP98-213ENST00000524563 BLMP54132 1417 aaPredicted RBP9.53□□□□□ -0.88
NUP98-213ENST00000524563 ANKARQ7Z5J8 1434 aa9.53□□□□□ -0.88
NUP98-213ENST00000524563 LRP5O75197 1615 aa9.53□□□□□ -0.88
NUP98-213ENST00000524563 UNC5CLQ8IV45 518 aa9.52□□□□□ -0.89
NUP98-213ENST00000524563 GJD4Q96KN9 370 aaPredicted RBP9.52□□□□□ -0.89
NUP98-213ENST00000524563 PRAM1Q96QH2 718 aa9.52□□□□□ -0.89
NUP98-213ENST00000524563 TNS1Q9HBL0 1735 aaKnown RBP9.52□□□□□ -0.89
NUP98-213ENST00000524563 TOPAZ1Q8N9V7 1692 aa9.51□□□□□ -0.89
NUP98-213ENST00000524563 GPRASP1Q5JY77 1395 aa9.51□□□□□ -0.89
NUP98-213ENST00000524563 KIAA1210Q9ULL0 1709 aa9.51□□□□□ -0.89
NUP98-213ENST00000524563 SBNO1A3KN83 1393 aa9.5□□□□□ -0.89
NUP98-213ENST00000524563 ADGRB1O14514 1584 aa9.5□□□□□ -0.89
NUP98-213ENST00000524563 CCDC125Q86Z20 511 aa9.5□□□□□ -0.89
NUP98-213ENST00000524563 QRICH2Q9H0J4 1663 aa9.5□□□□□ -0.89
NUP98-213ENST00000524563 CFAP70Q5T0N1 1121 aa9.49□□□□□ -0.89
NUP98-213ENST00000524563 PMFBP1Q8TBY8 1022 aa9.49□□□□□ -0.89
NUP98-213ENST00000524563 CABLES1Q8TDN4 633 aa9.49□□□□□ -0.89
NUP98-213ENST00000524563 HIRIP3Q9BW71 556 aaPredicted RBP9.49□□□□□ -0.89
NUP98-213ENST00000524563 MINK1Q8N4C8 1332 aaPredicted RBP9.49□□□□□ -0.89
NUP98-213ENST00000524563 TRPM1Q7Z4N2 1603 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms